; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015013 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015013
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold3:40287285..40292506
RNA-Seq ExpressionSpg015013
SyntenySpg015013
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575982.1 Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.7e-13087.73Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA
        MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  GRMD+ KLK KEA ERKEEVNRKIASQKAISVILRREATKA
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA

Query:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS
        VIERKRGP NSKKLLPRTVLEALHERITALRWESALKVFELLREQ+WYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+EGCEVSHESYTALLSAYSRS
Subjt:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS

Query:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        GLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Subjt:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

XP_022954169.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita moschata]8.0e-13087.73Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA
        MAAHSTP+  LPPA++H NPKN +FL QQRA+    +SP PSSSSSSTDGKL++RSP  GRMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKA
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA

Query:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS
        VIERKRGP NSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+EGCEVSHESYTALLSAYSRS
Subjt:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS

Query:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        GLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Subjt:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

XP_022991692.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita maxima]5.5e-13188.45Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA
        MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  GRMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKA
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA

Query:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS
        VIERKRGP NSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+EGCEVSHESYTALLSAYSRS
Subjt:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS

Query:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        GLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Subjt:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

XP_023549189.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Cucurbita pepo subsp. pepo]6.1e-13087.73Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA
        MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  GRMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKA
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA

Query:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS
        VIERKRGP NSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+EGCEVSHESYTALLSAYSRS
Subjt:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS

Query:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        GLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAF++AQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Subjt:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

XP_038877300.1 pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Benincasa hispida]7.2e-13189.25Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS--TDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREAT
        MAAHSTPTNPLPPAINH NP N +F RQQRAT  KF SP  SSSSSS  +DGKLMERSP  GRMDVAKLK KEA ERKEEVNRKIASQKAISVILRREAT
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS--TDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREAT

Query:  KAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYS
        KAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPY GMYIKLIVMLGKCKQPEKAYELFQEMI+EGCEVSHESYTALLSAYS
Subjt:  KAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYS

Query:  RSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        RSGLLDKAF +L+EMKNSP CQPDVHTYSIL+KSCLQVFAFNKAQTLLSDMVTRGIKP+TITYN FIDAYGKAKM++++
Subjt:  RSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

TrEMBL top hitse value%identityAlignment
A0A1S3C6D0 pentatricopeptide repeat-containing protein At5g48730, chloroplastic1.3e-12587.13Show/hide
Query:  NPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS---TDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERK
        NPLPP INHR+P   +FLR+Q+ T  KF SP PSSSSSS   TDGKL++ SPH GRMDVAKLK KEA+ERKEEVNRKIASQKAISVILRREATKAVIERK
Subjt:  NPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS---TDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERK

Query:  RGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDK
        RGPNNSKKLLPRTVLEALH+RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAY+LFQEMI+EGCEVSHESYTALLSAYSRSGLLDK
Subjt:  RGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDK

Query:  AFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        AF +L+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVT+GIKP+TITYNTFIDAYGKAKM++++
Subjt:  AFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

A0A5A7SJF3 Pentatricopeptide repeat-containing protein9.8e-12687.13Show/hide
Query:  NPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS---TDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERK
        NPLPP INHR+P   +FLR+Q+ T  KF SP PSSSSSS   TDGKL++ SPH GRMDVAKLK KEA+ERKEEVNRKIASQKAISVILRREATKAVIERK
Subjt:  NPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSS---TDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERK

Query:  RGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDK
        RGPNNSKKLLPRTVLEALH+RITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAY+LFQEMI+EGCEVSHESYTALLSAYSRSGLLDK
Subjt:  RGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDK

Query:  AFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        AF +L+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVT+GIKP+TITYNTFIDAYGKAKM++++
Subjt:  AFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

A0A6J1CRU5 pentatricopeptide repeat-containing protein At5g48730, chloroplastic4.1e-12484.12Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA
        M  HSTPTNPLP AINHRNP+ P+ L++Q+ +PSK DSP      +S++GKLMER PHGGRMDVAKLK  EASERKEEVNRKIASQKAISVILRREATKA
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA

Query:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS
        VIE+KRGP NSKKLLP+TVLEALHER++ALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKA ELF EMIDEGCEVS ESYTALLSAYSRS
Subjt:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS

Query:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        GLLDKAF LLDEM+NSP CQPDVHTYSILIKSCLQVFAF KAQ LLSDMV RGIKP+TITYNTFIDAYGKAKM++++
Subjt:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

A0A6J1GS58 pentatricopeptide repeat-containing protein At5g48730, chloroplastic3.8e-13087.73Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA
        MAAHSTP+  LPPA++H NPKN +FL QQRA+    +SP PSSSSSSTDGKL++RSP  GRMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKA
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA

Query:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS
        VIERKRGP NSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+EGCEVSHESYTALLSAYSRS
Subjt:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS

Query:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        GLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Subjt:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

A0A6J1JMJ6 pentatricopeptide repeat-containing protein At5g48730, chloroplastic2.7e-13188.45Show/hide
Query:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA
        MAAHSTP+  LPPA++H NPKN +FL QQRA+   F+SP PSSSSSSTDGKLM+RSP  GRMD+AKLK KEA ERKEEVNRKIASQKAISVILRREATKA
Subjt:  MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKA

Query:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS
        VIERKRGP NSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMI+EGCEVSHESYTALLSAYSRS
Subjt:  VIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRS

Query:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        GLLD+AF LL+EMKNSP CQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKP+TITYNTFIDAYGKAKM++++
Subjt:  GLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

SwissProt top hitse value%identityAlignment
Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic3.1e-8461.15Show/hide
Query:  MAAHSTPTNPLPP-AINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATK
        M + ST T+  PP   N R  +    +R    +P + +  + S  S++T   L E       ++   + E+++ E KE+ N KIAS+KAIS+ILRREATK
Subjt:  MAAHSTPTNPLPP-AINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATK

Query:  AVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSR
        ++IE+K+G   SKKLLPRTVLE+LHERITALRWESA++VFELLREQLWY+P  G+Y+KLIVMLGKCKQPEKA+ELFQEMI+EGC V+HE YTAL+SAYSR
Subjt:  AVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSR

Query:  SGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        SG  D AF LL+ MK+S  CQPDVHTYSILIKS LQVFAF+K Q LLSDM  +GI+P+TITYNT IDAYGKAKM+ ++
Subjt:  SGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

Q9SCP4 Pentatricopeptide repeat-containing protein At3g531704.2e-4143.26Show/hide
Query:  KEASERKEEVNRKIAS-------QKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVML
        K  +ER E++N  + S       +K +S ILR +A    IERK        L P+ VLEAL E I   RW+SALK+F LLR+Q WY P    Y KL  +L
Subjt:  KEASERKEEVNRKIAS-------QKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVML

Query:  GKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYN
        G CKQP++A  LF+ M+ EG + + + YT+L+S Y +S LLDKAF  L+ MK+   C+PDV T+++LI  C ++  F+  ++++ +M   G+  ST+TYN
Subjt:  GKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYN

Query:  TFIDAYGKAKMYSDL
        T ID YGKA M+ ++
Subjt:  TFIDAYGKAKMYSDL

Q9SFV9 Pentatricopeptide repeat-containing protein At3g07290, mitochondrial9.4e-1738.3Show/hide
Query:  LRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSIL
        L    ALKVF+++ +++   P +  Y  LI  L +  + E+A+ L  +M ++GC+ S  +YT L+ A    GL+DKAF L DEM    GC+P+VHTY++L
Subjt:  LRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSIL

Query:  IKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGK
        I    +     +A  +   MV   I PS ITYN  I+ Y K
Subjt:  IKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGK

Q9SQU6 Pentatricopeptide repeat-containing protein At3g06430, chloroplastic1.3e-3743.92Show/hide
Query:  TKAVIERKRGPNNSKKLLPR---------TVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHE
        T+ V +R+    N KK L R         TV E L + I   +W  AL+VF++LREQ +Y+P  G Y+KL+V+LGK  QP +A +LF EM++EG E + E
Subjt:  TKAVIERKRGPNNSKKLLPR---------TVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHE

Query:  SYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
         YTALL+AY+RS L+D AF +LD+MK+ P CQPDV TYS L+K+C+    F+   +L  +M  R I P+T+T N  +  YG+   +  +
Subjt:  SYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

Q9SV96 Pentatricopeptide repeat-containing protein At4g39620, chloroplastic1.2e-1935.29Show/hide
Query:  RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTY
        +W   L+VF  +++Q WY P  G+Y KLI ++GK  Q   A  LF EM + GC      Y AL++A+     ++  L+K    LD+MK    CQP+V TY
Subjt:  RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTY

Query:  SILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA
        +IL+++  Q    ++   L  D+    + P   T+N  +DAYGK  M  ++ A
Subjt:  SILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA

Arabidopsis top hitse value%identityAlignment
AT3G06430.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.0e-3943.92Show/hide
Query:  TKAVIERKRGPNNSKKLLPR---------TVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHE
        T+ V +R+    N KK L R         TV E L + I   +W  AL+VF++LREQ +Y+P  G Y+KL+V+LGK  QP +A +LF EM++EG E + E
Subjt:  TKAVIERKRGPNNSKKLLPR---------TVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHE

Query:  SYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
         YTALL+AY+RS L+D AF +LD+MK+ P CQPDV TYS L+K+C+    F+   +L  +M  R I P+T+T N  +  YG+   +  +
Subjt:  SYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL

AT3G53170.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.0e-4243.26Show/hide
Query:  KEASERKEEVNRKIAS-------QKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVML
        K  +ER E++N  + S       +K +S ILR +A    IERK        L P+ VLEAL E I   RW+SALK+F LLR+Q WY P    Y KL  +L
Subjt:  KEASERKEEVNRKIAS-------QKAISVILRREATKAVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVML

Query:  GKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYN
        G CKQP++A  LF+ M+ EG + + + YT+L+S Y +S LLDKAF  L+ MK+   C+PDV T+++LI  C ++  F+  ++++ +M   G+  ST+TYN
Subjt:  GKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYN

Query:  TFIDAYGKAKMYSDL
        T ID YGKA M+ ++
Subjt:  TFIDAYGKAKMYSDL

AT4G39620.1 Tetratricopeptide repeat (TPR)-like superfamily protein8.5e-2135.29Show/hide
Query:  RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTY
        +W   L+VF  +++Q WY P  G+Y KLI ++GK  Q   A  LF EM + GC      Y AL++A+     ++  L+K    LD+MK    CQP+V TY
Subjt:  RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTY

Query:  SILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA
        +IL+++  Q    ++   L  D+    + P   T+N  +DAYGK  M  ++ A
Subjt:  SILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA

AT4G39620.2 Tetratricopeptide repeat (TPR)-like superfamily protein8.5e-2135.29Show/hide
Query:  RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTY
        +W   L+VF  +++Q WY P  G+Y KLI ++GK  Q   A  LF EM + GC      Y AL++A+     ++  L+K    LD+MK    CQP+V TY
Subjt:  RWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAY----SRSGLLDKAFLLLDEMKNSPGCQPDVHTY

Query:  SILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA
        +IL+++  Q    ++   L  D+    + P   T+N  +DAYGK  M  ++ A
Subjt:  SILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPA

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein2.2e-8561.15Show/hide
Query:  MAAHSTPTNPLPP-AINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATK
        M + ST T+  PP   N R  +    +R    +P + +  + S  S++T   L E       ++   + E+++ E KE+ N KIAS+KAIS+ILRREATK
Subjt:  MAAHSTPTNPLPP-AINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATK

Query:  AVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSR
        ++IE+K+G   SKKLLPRTVLE+LHERITALRWESA++VFELLREQLWY+P  G+Y+KLIVMLGKCKQPEKA+ELFQEMI+EGC V+HE YTAL+SAYSR
Subjt:  AVIERKRGPNNSKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSR

Query:  SGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL
        SG  D AF LL+ MK+S  CQPDVHTYSILIKS LQVFAF+K Q LLSDM  +GI+P+TITYNT IDAYGKAKM+ ++
Subjt:  SGLLDKAFLLLDEMKNSPGCQPDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCCCACTCCACGCCCACTAACCCTCTCCCGCCGGCAATCAACCATCGAAACCCAAAGAATCCCATATTTCTTCGTCAACAACGAGCGACCCCTTCCAAATTCGA
CTCCCCCGTTCCATCTTCCTCTTCTTCTTCTACAGATGGTAAGCTCATGGAGAGAAGTCCTCATGGAGGACGCATGGACGTGGCAAAGCTGAAGGAAAAGGAAGCGAGCG
AGAGAAAGGAGGAGGTCAACAGGAAGATTGCTTCTCAGAAAGCCATTTCGGTGATTTTGCGCAGAGAAGCCACGAAGGCCGTCATTGAGAGGAAGAGAGGCCCCAATAAT
TCTAAGAAACTGCTTCCGCGGACTGTTCTCGAAGCCCTCCATGAAAGAATCACGGCCTTGCGATGGGAATCTGCGCTCAAGGTTTTTGAACTACTACGCGAACAATTGTG
GTACAGACCTTACGCTGGGATGTACATTAAGCTAATTGTCATGCTTGGAAAATGTAAGCAACCTGAAAAAGCTTACGAGCTGTTCCAAGAAATGATTGACGAAGGCTGTG
AAGTTAGCCATGAGTCATATACTGCTCTCTTGTCGGCCTATAGCAGGAGTGGTCTTCTTGACAAAGCATTTTTGCTCCTCGACGAGATGAAAAACAGTCCTGGTTGCCAA
CCTGATGTTCACACTTATTCTATCCTCATAAAATCATGCTTGCAGGTGTTTGCATTCAACAAAGCACAAACTCTACTCTCTGACATGGTGACTCGAGGAATAAAACCCAG
CACTATTACATATAATACCTTCATTGATGCATATGGCAAAGCAAAAATGTATTCTGACCTGCCTGCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCCCACTCCACGCCCACTAACCCTCTCCCGCCGGCAATCAACCATCGAAACCCAAAGAATCCCATATTTCTTCGTCAACAACGAGCGACCCCTTCCAAATTCGA
CTCCCCCGTTCCATCTTCCTCTTCTTCTTCTACAGATGGTAAGCTCATGGAGAGAAGTCCTCATGGAGGACGCATGGACGTGGCAAAGCTGAAGGAAAAGGAAGCGAGCG
AGAGAAAGGAGGAGGTCAACAGGAAGATTGCTTCTCAGAAAGCCATTTCGGTGATTTTGCGCAGAGAAGCCACGAAGGCCGTCATTGAGAGGAAGAGAGGCCCCAATAAT
TCTAAGAAACTGCTTCCGCGGACTGTTCTCGAAGCCCTCCATGAAAGAATCACGGCCTTGCGATGGGAATCTGCGCTCAAGGTTTTTGAACTACTACGCGAACAATTGTG
GTACAGACCTTACGCTGGGATGTACATTAAGCTAATTGTCATGCTTGGAAAATGTAAGCAACCTGAAAAAGCTTACGAGCTGTTCCAAGAAATGATTGACGAAGGCTGTG
AAGTTAGCCATGAGTCATATACTGCTCTCTTGTCGGCCTATAGCAGGAGTGGTCTTCTTGACAAAGCATTTTTGCTCCTCGACGAGATGAAAAACAGTCCTGGTTGCCAA
CCTGATGTTCACACTTATTCTATCCTCATAAAATCATGCTTGCAGGTGTTTGCATTCAACAAAGCACAAACTCTACTCTCTGACATGGTGACTCGAGGAATAAAACCCAG
CACTATTACATATAATACCTTCATTGATGCATATGGCAAAGCAAAAATGTATTCTGACCTGCCTGCCTTTTGA
Protein sequenceShow/hide protein sequence
MAAHSTPTNPLPPAINHRNPKNPIFLRQQRATPSKFDSPVPSSSSSSTDGKLMERSPHGGRMDVAKLKEKEASERKEEVNRKIASQKAISVILRREATKAVIERKRGPNN
SKKLLPRTVLEALHERITALRWESALKVFELLREQLWYRPYAGMYIKLIVMLGKCKQPEKAYELFQEMIDEGCEVSHESYTALLSAYSRSGLLDKAFLLLDEMKNSPGCQ
PDVHTYSILIKSCLQVFAFNKAQTLLSDMVTRGIKPSTITYNTFIDAYGKAKMYSDLPAF