; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015014 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015014
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold3:40341002..40344526
RNA-Seq ExpressionSpg015014
SyntenySpg015014
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]2.6e-3147.75Show/hide
Query:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL
        K++R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K +YCLFH DHGH+T++C  LK+E+E LI  GYL
Subjt:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL

Query:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT
        KE+V EPKA           T++G   + P REIRTI GGP    S RKRK   REAR   E      V+ TT+  +T
Subjt:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT

XP_022152370.1 uncharacterized protein LOC111020115 [Momordica charantia]7.4e-2645.91Show/hide
Query:  DEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKE
        D+  R    H R RP        +E+YTPT +P  ++L  I  +    LLK P +++  P++R+K +YCLFHRDHGHST NC +LK +IE LIQ+ Y K+
Subjt:  DEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKE

Query:  FVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFE
        FVG+P++  A++   R R     R K+ P   I TIFGGP+GG S  KRK +AREAR E
Subjt:  FVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.3e-3351.85Show/hide
Query:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL
        K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYL
Subjt:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL

Query:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE
        KE+V EPKA           T++G   + P REIRTI GGP    S RKRKA  REAR   E
Subjt:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]3.8e-3054.48Show/hide
Query:  KFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDK
        KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D 
Subjt:  KFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDK

Query:  EEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP
        + P REIRTI GG     S RKRKA  REAR  P
Subjt:  EEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]2.6e-3147.19Show/hide
Query:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL
        K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL
Subjt:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL

Query:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT
        +E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E       + TT+ S+T
Subjt:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.3e-3147.75Show/hide
Query:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL
        K++R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K +YCLFH DHGH+T++C  LK+E+E LI  GYL
Subjt:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL

Query:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT
        KE+V EPKA           T++G   + P REIRTI GGP    S RKRK   REAR   E      V+ TT+  +T
Subjt:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT

A0A6J1DDR5 uncharacterized protein LOC1110201153.6e-2645.91Show/hide
Query:  DEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKE
        D+  R    H R RP        +E+YTPT +P  ++L  I  +    LLK P +++  P++R+K +YCLFHRDHGHST NC +LK +IE LIQ+ Y K+
Subjt:  DEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKE

Query:  FVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFE
        FVG+P++  A++   R R     R K+ P   I TIFGGP+GG S  KRK +AREAR E
Subjt:  FVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFE

A0A6J1DWY0 uncharacterized protein LOC1110252936.1e-3451.85Show/hide
Query:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL
        K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K +YCLFHRDHGH+T++C  LK+E+E LI+ GYL
Subjt:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL

Query:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE
        KE+V EPKA           T++G   + P REIRTI GGP    S RKRKA  REAR   E
Subjt:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPE

A0A6J1DYL6 uncharacterized protein LOC1110257851.3e-3147.19Show/hide
Query:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL
        K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK    +R K +YCLFHRDH H+T++   LK+E+E LI+ GYL
Subjt:  KKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYL

Query:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT
        +E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E       + TT+ S+T
Subjt:  KEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRVFRSVHKTTDSSIT

A0A6J1DZ52 uncharacterized protein LOC1110256121.8e-3054.48Show/hide
Query:  KFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDK
        KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D 
Subjt:  KFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDK

Query:  EEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP
        + P REIRTI GG     S RKRKA  REAR  P
Subjt:  EEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTAGCCACCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGTCTGTGGGGAGGAAAGCTTGCC
AAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAAT
CTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATA
CTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGAC
GAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATG
ACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTTCC
GAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCT
GAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAATAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCC
GACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCG
GGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGA
AGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAG
AGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGTA
TTCAGGAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCGTCGAGTCTACCTCGCCCCATCAGCTTGAGACAATGTGAGCCTGGACCCTGGGT
CTACCTCACGAGCCATCACTTTTTGCGAGCCTGGACCGTCGAGTCTACCTCGCCCCATCAGCTTGAGACAATATTGAGACTATGTGAGCCTGGACCACCGAGTCTACCTC
ACCTCATCTGGCCTGAGCACCCTTACATCGGGCGAGCCTGGACCACCGAGTCTACCTCGCCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCA
CCCGAGTCTAGCTCACTTTGCTGGGGCAAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTAGCCACCCCGGTTTCGCCTGGTTTGTCCCGAAACGCCTCCGAATTCCTAAAAACCCTAGGAGCACGAGCAGTTGGCGCCGTCTGTGGGGAGGAAAGCTTGCC
AAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACAGAAAATTCGGATGGTGACCGCCACCAGCGGAGGTCACGGGCTGAAT
CTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGCTCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATA
CTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATCCGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGAC
GAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGATCGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATG
ACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGAGAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTTCC
GAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCGAGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCT
GAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAATAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCC
GACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACACCAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCG
GGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTATTGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGA
AGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCCCAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAG
AGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAGGAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGTA
TTCAGGAGTGTGCACAAGACAACCGATTCAAGCATCACGAAACGCGAGCCTGGACCGTCGAGTCTACCTCGCCCCATCAGCTTGAGACAATGTGAGCCTGGACCCTGGGT
CTACCTCACGAGCCATCACTTTTTGCGAGCCTGGACCGTCGAGTCTACCTCGCCCCATCAGCTTGAGACAATATTGAGACTATGTGAGCCTGGACCACCGAGTCTACCTC
ACCTCATCTGGCCTGAGCACCCTTACATCGGGCGAGCCTGGACCACCGAGTCTACCTCGCCTCATCCAAACTTGAGATTGCATGAGCCTGGACCACCGAAGTCTACCTCA
CCCGAGTCTAGCTCACTTTGCTGGGGCAAAAATTGA
Protein sequenceShow/hide protein sequence
MSLATPVSPGLSRNASEFLKTLGARAVGAVCGEESLPNLHIGHSMSKGMEKGNQDINTENSDGDRHQRRSRAESPRPRSPLPSSREKQTDLKFAALENKVSAMDQNLSRI
LRILDKPGPSTRTLDERLVRDPRKGKEPLERTAESETRSKGKKTSSMTSKVRGLKPTDRTILRSPESSTLKGHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAS
EAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNALKELGNPQGELPNRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFP
GRMKSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRV
FRSVHKTTDSSITKREPGPSSLPRPISLRQCEPGPWVYLTSHHFLRAWTVESTSPHQLETILRLCEPGPPSLPHLIWPEHPYIGRAWTTESTSPHPNLRLHEPGPPKSTS
PESSSLCWGKN