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Spg015098 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015098
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase MIEL1-like
Genome locationscaffold3:44077672..44078010
RNA-Seq ExpressionSpg015098
SyntenySpg015098
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6575858.1 hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia]8.9e-2469.81Show/hide
Query:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLI IAL+ALLL+SE LP SAA H  A + LAG+  R+ LQTA+ HQVAEN  G +YSFEQKIRRR+RR+V R AEGPSPS+AN SRT+SFG+G
Subjt:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLC
        S+LCLC
Subjt:  SVLCLC

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1253.7Show/hide
Query:  IKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNGEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLCL
        +KSL+ +AL+ALLL SESL +SA   +G SNSL G+L RN+LQTA  HQ+A+N + E S E+K+    +R +   A G   SAANRSR AS GVGSVL  
Subjt:  IKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNGEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLCL

Query:  CIVFGLFV
         +V GLF+
Subjt:  CIVFGLFV

KAG6593163.1 hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1658.72Show/hide
Query:  IKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQ-TADHHQVAENTNGEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLC
        IK+L+ IAL+ALLL  ESLP+SAAVH GAS SLAGIL RNI+Q TADHHQVAE       F   I+RR R         P  SAANRSR A  GVGS+LC
Subjt:  IKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQ-TADHHQVAENTNGEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLC

Query:  LCIVFGLFV
        + ++ GLF+
Subjt:  LCIVFGLFV

XP_022954099.1 uncharacterized protein LOC111456466 [Cucurbita moschata]3.6e-2569.03Show/hide
Query:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLI IAL+ALLL+SE LP SAA H  A + LA +  R+ LQTA+ HQVAEN  G +YSFEQKIRRR+RR+V R AEGPSPS+AN S+T+SFGVG
Subjt:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

XP_022992473.1 uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima]4.7e-2569.03Show/hide
Query:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLI IAL+ALLL+ E LP SAA H  A + LAG+   + LQTA+ HQVAEN  G +YSFEQKIRRR+RR+V R AEGPSPS+AN SRT+SFGVG
Subjt:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

TrEMBL top hitse value%identityAlignment
A0A0A0K7L9 Uncharacterized protein1.6e-0746.15Show/hide
Query:  MAPMIKSLIPIALVALLLISESLP--SSAAVHAGASNSLAGI--LHRNILQTADHHQVAENTNGEYSFEQKIRRRSRRSVER-AAEGPSPSAANRSRTAS
        MA  +K+L+ I  +AL ++    P  SSA +H  A +SL  I   HRN+LQ  D HQ     +G        RRR+RR+V R  A+ PSPS ANRS+T S
Subjt:  MAPMIKSLIPIALVALLLISESLP--SSAAVHAGASNSLAGI--LHRNILQTADHHQVAENTNGEYSFEQKIRRRSRRSVER-AAEGPSPSAANRSRTAS

Query:  FGVGSVLCLCIVFGLFV
         G GSVL L IV  LFV
Subjt:  FGVGSVLCLCIVFGLFV

A0A0A0K934 Uncharacterized protein1.8e-0950Show/hide
Query:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        M P IKSLI +AL+ALLL+S    +SA  H  A NS  G     + Q  ++ QV EN NG  YSFEQKI ++  R  ++ AEGPSPS ANRSR   F +G
Subjt:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like1.1e-0644.74Show/hide
Query:  IKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNGEY-----SFEQKIRRRSRRSVERAAEG-PSPSAANRSRTASFGV
        I+ L+ IAL+ALL  SESL +        S+SL GI HRNIL T  H  V  +    Y         K RRR R  +   + G    SA NRSR ASF V
Subjt:  IKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNGEY-----SFEQKIRRRSRRSVERAAEG-PSPSAANRSRTASFGV

Query:  GSVLCLCIVFGLFV
        GS+LC+CI  GLF+
Subjt:  GSVLCLCIVFGLFV

A0A6J1GRX2 uncharacterized protein LOC1114564661.8e-2569.03Show/hide
Query:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLI IAL+ALLL+SE LP SAA H  A + LA +  R+ LQTA+ HQVAEN  G +YSFEQKIRRR+RR+V R AEGPSPS+AN S+T+SFGVG
Subjt:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

A0A6J1JZB1 uncharacterized protein LOC111488793 isoform X12.3e-2569.03Show/hide
Query:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG
        MAP IKSLI IAL+ALLL+ E LP SAA H  A + LAG+   + LQTA+ HQVAEN  G +YSFEQKIRRR+RR+V R AEGPSPS+AN SRT+SFGVG
Subjt:  MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNG-EYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVG

Query:  SVLCLCIVFGLFV
        S+LCLC VFGLF+
Subjt:  SVLCLCIVFGLFV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCATGATCAAATCCCTAATTCCGATAGCGCTTGTCGCTCTTCTCTTGATCTCTGAATCCCTACCCTCTTCTGCCGCCGTTCACGCCGGCGCTTCCAATTCTCT
TGCCGGAATCCTTCACCGGAATATCCTCCAGACGGCGGATCATCATCAAGTTGCAGAGAATACGAATGGAGAGTACTCCTTCGAACAAAAGATTAGAAGGCGGAGCCGAC
GATCCGTAGAGAGAGCCGCCGAAGGTCCGAGTCCATCGGCGGCGAATCGGAGCCGAACGGCGTCGTTTGGCGTCGGATCTGTGCTGTGCCTCTGTATTGTTTTTGGTTTG
TTCGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCCCATGATCAAATCCCTAATTCCGATAGCGCTTGTCGCTCTTCTCTTGATCTCTGAATCCCTACCCTCTTCTGCCGCCGTTCACGCCGGCGCTTCCAATTCTCT
TGCCGGAATCCTTCACCGGAATATCCTCCAGACGGCGGATCATCATCAAGTTGCAGAGAATACGAATGGAGAGTACTCCTTCGAACAAAAGATTAGAAGGCGGAGCCGAC
GATCCGTAGAGAGAGCCGCCGAAGGTCCGAGTCCATCGGCGGCGAATCGGAGCCGAACGGCGTCGTTTGGCGTCGGATCTGTGCTGTGCCTCTGTATTGTTTTTGGTTTG
TTCGTGTAA
Protein sequenceShow/hide protein sequence
MAPMIKSLIPIALVALLLISESLPSSAAVHAGASNSLAGILHRNILQTADHHQVAENTNGEYSFEQKIRRRSRRSVERAAEGPSPSAANRSRTASFGVGSVLCLCIVFGL
FV