CuGenDBv2

Gene ID	Spg015101
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	pre-mRNA-processing factor 39 isoform X2
Genome location	scaffold3:41188209..41196385
RNA-Seq Expression	Spg015101
Synteny	Spg015101
Gene Ontology terms	GO:0000395 - mRNA 5'-splice site recognition (biological process) GO:0048510 - regulation of timing of transition from vegetative to reproductive phase (biological process) GO:0000243 - commitment complex (cellular component) GO:0005685 - U1 snRNP (cellular component) GO:0071004 - U2-type prespliceosome (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR003107 - HAT (Half-A-TPR) repeat IPR011990 - Tetratricopeptide-like helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039889.1 pre-mRNA-processing factor 39 isoform X2 [Cucumis melo var. makuwa]

4.6e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

XP_008459958.1 PREDICTED: pre-mRNA-processing factor 39 isoform X1 [Cucumis melo]

4.6e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

XP_008459959.1 PREDICTED: pre-mRNA-processing factor 39 isoform X2 [Cucumis melo]

4.6e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

XP_016902502.1 PREDICTED: pre-mRNA-processing factor 39 isoform X3 [Cucumis melo]

4.6e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

XP_038876250.1 pre-mRNA-processing factor 39 isoform X1 [Benincasa hispida]

5.1e-254

86.68

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSEVM Y S GYVSSG+ADSSTNLIPHPGAFQSVITGD+SVS TSADMG  +AYVTDPNS QQGNHV EVDETKA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+  V  HDS+LNG+VAAESVN SSVENGN VENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        +FLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SE+AVVDVQSEAGDQVNGEE   DA EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQA+D+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KF31 Uncharacterized protein

3.9e-252

85.93

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTNLIPHPGAFQSVITGDFSVS TSADMG  +AY TDPNS+QQGNHV EVDETKA V  TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
         SAME+A  V HDS++NGS+A ESV+ASSVENG  VENANE  EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

A0A1S3CBE2 pre-mRNA-processing factor 39 isoform X1

2.2e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

A0A1S3CBV2 pre-mRNA-processing factor 39 isoform X2

2.2e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

A0A1S4E2P8 pre-mRNA-processing factor 39 isoform X3

2.2e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

A0A5A7TF58 Pre-mRNA-processing factor 39 isoform X2

2.2e-255

86.87

Show/hide

Query:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE
        MGDSETVVAQTSE MGY SAGYVSSG+ADSSTN+IPHPGAFQSVITGDFSVS TSADMG  +AYVTDPNS+QQGNHV EVDE KA VV TDHS+NAAVSE
Subjt:  MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSE

Query:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD
        NSAME+A +V HDS++NGSVA ESVNASSVENGN VENANEA EEQHFVDGSVPPLSAEEDRLWNIVRANSLDFN+WTSLIEETEKVAEDNILKIRRVYD
Subjt:  NSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYD

Query:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
        AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL TYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR
Subjt:  AFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGR

Query:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE
        LAMIYTRILENPNQQLDRYFNS                   FKELAASRPLSELK+SEEAVVDVQSEAGDQVNGEE   +A+EPSSKTVSAGLTEAEELE
Subjt:  LAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEE---DATEPSSKTVSAGLTEAEELE

Query:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA
        KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASD+MDLANNALA
Subjt:  KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALA

Query:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD
        R SQVFVK         P I+LF     E  GD
Subjt:  RGSQVFVKVPSREAFTEPLINLFG----EAEGD

SwissProt top hits

e value

%identity

Alignment

O74970 Pre-mRNA-processing factor 39

2.5e-54

33.51

Show/hide

Query:  EEDRLWNIVRANSLDFNAWTSLIEETEKV--------AEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHY
        E D+    +  N  DF+AW  L+  +E +        ++  I  +R VYD FL ++PL +GYWKKYAD E      +    +YER + G+ +SVD+W +Y
Subjt:  EEDRLWNIVRANSLDFNAWTSLIEETEKV--------AEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHY

Query:  CIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRP
        C F + T GD   +R LF +G   VG D+LS P WDKY+E+E  Q+    +  +  R++  P  Q  RYF                     F +++ S+P
Subjt:  CIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRP

Query:  LSELKNSEEAVVDVQSEAGDQVNGEEDATEPSSKTVSAG----LTEAEELE-------KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAEL
        + +L    + +  +++          D T   +K VSAG      E  ELE       +   I  +I++K +   +K   FE+ I+RPYFHV+ L+ A+L
Subjt:  LSELKNSEEAVVDVQSEAGDQVNGEEDATEPSSKTVSAG----LTEAEELE-------KYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAEL

Query:  DNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQAS-DNMDLANNALARGSQVFVKVPSREAFTEPLINLFGEAEGD
         NW  YLDF E EGD  ++  LYERC+I CA Y E+W RY   M A  D+++  +    R S +F  + SR         LF E++G+
Subjt:  DNWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQAS-DNMDLANNALARGSQVFVKVPSREAFTEPLINLFGEAEGD

Q1JPZ7 Pre-mRNA-processing factor 39

6.0e-48

32.41

Show/hide

Query:  PNSIQQGNHVGE----VDETKAGVVATDHSKNAA--VSENSAM------ESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPP
        P S +Q   V +    V+  K  V   D S + A   +ENS        +  +  +    +  +   +S + S++E  +A +   E + E        P 
Subjt:  PNSIQQGNHVGE----VDETKAGVVATDHSKNAA--VSENSAM------ESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPP

Query:  LSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL
        L  E +RL  +V  N  DFN W  L++  E+  E+++L  R+ +DAF   +P CYGYWKKYAD E + G      EVY R +  +  SVD+WLHY  F  
Subjt:  LSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTL

Query:  ----STYGDPET-IRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRP
            ++ G+ E+ IR  +E  +   GTD+ S  LW+ YI +E  Q +   +  IY R+L  P Q   ++F      F   +   +    L  +E  + R 
Subjt:  ----STYGDPET-IRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRP

Query:  LSELKNSEEAVVDVQSEA-GDQV-NGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLD
             N      D ++EA G+++  G ED  +P+ +     +TE E +  K I  R+E++   +   SK   FE  I+RPYFHV+ L   +L+NW  YLD
Subjt:  LSELKNSEEAVVDVQSEA-GDQV-NGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLD

Query:  FIEQEGDLNKVVKLYERCVIACANYPEYWIRY
        F  + G   +VV L+ERC+IACA Y E+WI+Y
Subjt:  FIEQEGDLNKVVKLYERCVIACANYPEYWIRY

Q4KLU2 Pre-mRNA-processing factor 39

7.3e-54

37.17

Show/hide

Query:  VPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCI
        +PPL  + ++ W  V+A   DFN WT L++  E+  E+++   R+ +DAFLA +P CYGYWKKYAD E +  +  +  EVY R +  +T SVD+W+HY  
Subjt:  VPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCI

Query:  FTLSTY--GDPE---TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAA
        F   T    DPE   T+R  FE  +   G D+ S  LW+ YI +E  Q     +  IY+R+L  P Q    +F        F+   Q      L +E   
Subjt:  FTLSTY--GDPE---TIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAA

Query:  SRPLSELKNSEEAVVDVQSEAGDQV-NGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSY
        S    EL+  E A + +     D + +G E+  +P+ +T     TE E +  + I + +EI+   +   SKI  FE  I+RPYFHV+PL  A+L+NW  Y
Subjt:  SRPLSELKNSEEAVVDVQSEAGDQV-NGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSY

Query:  LDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQ
        L+F  + G   ++V L+ERCVIACA Y E+WI+Y   M+
Subjt:  LDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQ

Q86UA1 Pre-mRNA-processing factor 39

2.4e-49

31.98

Show/hide

Query:  QGNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASS--VENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRAN
        Q +H+ E   +  G  +T +S    V E+    S E+++          + +VNAS+   E  +AV+     +E     + + PP   E ++ W  V  N
Subjt:  QGNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASS--VENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRAN

Query:  SLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE---TIR
          DF  W  L++  E+  E++++  R+ +D F   +P CYGYWKKYAD E R  +     EVY R +  +  SVD+W+HY  F   T   GDPE   TIR
Subjt:  SLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE---TIR

Query:  RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQ
          FE  +   GTD+ S  LW+ YI +E  Q     +  IY RIL  P Q    +F      F   +      DLL  ++    R   EL +      D  
Subjt:  RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQ

Query:  SEAGDQVNGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYER
            D  +G ED T+P+       +TE E +  + I I +E++   +   SK   FE  I+RPYFHV+PL  A+L NW  YL+F  + G   +VV L+ER
Subjt:  SEAGDQVNGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKVVKLYER

Query:  CVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFGEAEGDPQKSSNE
        CVI+CA Y E+WI+Y   M+        N+++     VF +  +     +P++++   A  + Q + NE
Subjt:  CVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFGEAEGDPQKSSNE

Q8K2Z2 Pre-mRNA-processing factor 39

5.0e-47

31.62

Show/hide

Query:  QGNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSL
        Q +H+ E   +  G  +T +S   AV E+    S E+++         A+ S +AS+ EN    E AN  +      +G  PP   E ++ W  V  N  
Subjt:  QGNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSL

Query:  DFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE---TIRRL
        DF  W  L++  E+  E++++  R+ +D F   +P CYGYWKKYAD E R  +  +  EVY R +  +  SVD+W+HY  F   T   GD E   TIR  
Subjt:  DFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY--GDPE---TIRRL

Query:  FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSE
        FE  +   GTD+ S  LW+ YI +E  Q     +  +Y RIL  P Q    +F      F   +      DLL  ++    R   EL +      D    
Subjt:  FERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSE

Query:  AGDQVNGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAE-LDNWHSYLDFIEQEGDLNKVVKLYERC
          D  +G ED +          +TE E +  + I I +E++   +   SK   FE  I+RPYFHV+PL  A+   NW  YL+F  + G   +VV L+ERC
Subjt:  AGDQVNGEEDATEPSSKTVSAGLTEAEEL-EKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAE-LDNWHSYLDFIEQEGDLNKVVKLYERC

Query:  VIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFGEAEGDPQKSSNE
        VI+CA Y E+WI+Y   M+        N+++     VF +  +     +P+ ++   A  + Q + NE
Subjt:  VIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFGEAEGDPQKSSNE

Arabidopsis top hits

e value

%identity

Alignment

AT1G04080.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.9e-146

58.05

Show/hide

Query:  GNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLD
        G+    V E        D++ +AA  E++  E+A +VD   ++N          + VENG+A +N    +      D +   LS EE+RLWNIVRANSL+
Subjt:  GNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLD

Query:  FNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLA
        FNAWT+LI+ETE++A+DNI KIR+VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++TYGDPETIRRLFER L 
Subjt:  FNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLA

Query:  YVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGD---
        YVGTD+LS PLWDKYIEYEYMQQ+W R+A+IYTRILENP Q LDRYF+S                   FKELA +RPLSEL+++EE+     + AGD   
Subjt:  YVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGD---

Query:  ---QVNGE---------EDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKV
             +GE         + +TE S K  SA  TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+NWH+YLDFIE++GD NKV
Subjt:  ---QVNGE---------EDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNKV

Query:  VKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFG----EAEGD
        VKLYERCV+ CANYPEYWIRY+  M+AS + DLA NALAR +QVFVK        +P I+LF     E  GD
Subjt:  VKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFG----EAEGD

AT1G04080.2 Tetratricopeptide repeat (TPR)-like superfamily protein

1.7e-82

58.57

Show/hide

Query:  RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQ
        RLFER L YVGTD+LS PLWDKYIEYEYMQQ+W R+A+IYTRILENP Q LDRYF+S                   FKELA +RPLSEL+++EE+     
Subjt:  RLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQ

Query:  SEAGD------QVNGE---------EDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIE
        + AGD        +GE         + +TE S K  SA  TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+NWH+YLDFIE
Subjt:  SEAGD------QVNGE---------EDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIE

Query:  QEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFG----EAEGD
        ++GD NKVVKLYERCV+ CANYPEYWIRY+  M+AS + DLA NALAR +QVFVK        +P I+LF     E  GD
Subjt:  QEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFG----EAEGD

AT1G04080.3 Tetratricopeptide repeat (TPR)-like superfamily protein

1.3e-138

51.99

Show/hide

Query:  GNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLD
        G+    V E        D++ +AA  E++  E+A +VD   ++N          + VENG+A +N    +      D +   LS EE+RLWNIVRANSL+
Subjt:  GNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVVDHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLD

Query:  FNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLA
        FNAWT+LI+ETE++A+DNI KIR+VYDAFLAEFPLCYGYWKK+ADHEAR G+ DKVVEVYERAV GVTYSVDIWLHYC F ++TYGDPETIRRLFER L 
Subjt:  FNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLA

Query:  YVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGD---
        YVGTD+LS PLWDKYIEYEYMQQ+W R+A+IYTRILENP Q LDRYF+S                   FKELA +RPLSEL+++EE+     + AGD   
Subjt:  YVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGD---

Query:  ---QVNGE---------EDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNK-
             +GE         + +TE S K  SA  TE EEL+KY+ IRE +Y K+KEF+SKIIG+E AIRRPYFHVRPLNVAEL+NWH+YLDFIE++GD NK 
Subjt:  ---QVNGE---------EDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEGDLNK-

Query:  ------------------------------------------------------VVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVF
                                                              VVKLYERCV+ CANYPEYWIRY+  M+AS + DLA NALAR +QVF
Subjt:  ------------------------------------------------------VVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVF

Query:  VKVPSREAFTEPLINLFG----EAEGD
        VK        +P I+LF     E  GD
Subjt:  VKVPSREAFTEPLINLFG----EAEGD

AT1G17760.1 Tetratricopeptide repeat (TPR)-like superfamily protein

4.4e-06

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Query:  LIEETEKVAE----DNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY------GDPETIRRLFE
        ++EE E +A+      I +   +Y+  L+ +P    +WK+Y + +    + D   +++ R +      V +W  Y  F    Y      G  ET  + FE
Subjt:  LIEETEKVAE----DNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTY------GDPETIRRLFE

Query:  RGLAYVGTDYLSFPLWDKYIEY----------EYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELW-EQSSFDLLLFKELAAS--RPLSELKN
          L Y+GTD  S P+W +YI +          E + ++   L  +Y R +  P   ++            +LW +  +F+  + ++LA           N
Subjt:  RGLAYVGTDYLSFPLWDKYIEY----------EYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELW-EQSSFDLLLFKELAAS--RPLSELKN

Query:  SEEAVVDVQSEAGDQVNGEEDATEPSSKTVSAGLTEAEELEKYIAIRE---EIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEG
        S  AV   + +  ++++    A  P+    S   T+    +K+++  +   +    A      I  +E  +   Y +         D W+ Y ++  + G
Subjt:  SEEAVVDVQSEAGDQVNGEEDATEPSSKTVSAGLTEAEELEKYIAIRE---EIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYLDFIEQEG

Query:  DLNKVVKLYERCVIA
          +  +K+++R + A
Subjt:  DLNKVVKLYERCVIA

AT5G46400.1 Tetratricopeptide repeat (TPR)-like superfamily protein

9.7e-78

41.99

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Query:  EEDRLWNIVRANSLDFNAWTSLIEETEKVA-EDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLST
        + DRL     + +LDF+ WT LI E E  +  D+I K+  VYDAFL EFPLC+GYW+KYA H+ +  + +  VEV+ERAV   TYSV +WL YC F ++ 
Subjt:  EEDRLWNIVRANSLDFNAWTSLIEETEKVA-EDNILKIRRVYDAFLAEFPLCYGYWKKYADHEARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLST

Query:  YGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNS
        Y DP  + RLFERGL+++G DY    LWDKYIEY   QQ+W  LA +Y R L+ P+++LD Y+ +                   F+++AAS     LK  
Subjt:  YGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFELWEQSSFDLLLFKELAASRPLSELKNS

Query:  EEAVVDVQSE-AGDQVNGEEDATEPSSKTVSAGLTE----------AEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYL
         +  +DV  + + D +  +   T  + + +S  + E          ++ L  Y++I E+ Y+ +++   KI  FET IRRPYFHV+PL+  +LDNWH+YL
Subjt:  EEAVVDVQSE-AGDQVNGEEDATEPSSKTVSAGLTE----------AEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELDNWHSYL

Query:  DFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPS
         F E  GD +  + LYERC+I CANY E+W RY+  +++    +LAN ALAR SQ FVK  S
Subjt:  DFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPS

Sequences

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CDS sequence

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ATGGGGGACAGTGAAACTGTAGTTGCCCAAACATCTGAAGTCATGGGATATACATCTGCTGGATATGTTTCGAGTGGCTTTGCTGATAGCAGTACAAATCTAATTCCTCA
TCCCGGCGCTTTTCAATCTGTGATCACTGGAGACTTTTCTGTTTCACCTACCTCTGCAGATATGGGCGGCAGCGATGCGTATGTTACAGATCCAAATTCTATCCAGCAAG
GAAATCATGTTGGTGAGGTGGATGAGACAAAGGCAGGTGTAGTAGCAACTGATCACAGTAAGAATGCTGCTGTATCAGAAAATTCAGCTATGGAATCTGCTGAAGTAGTC
GATCACGATTCTACTTTAAATGGAAGCGTTGCTGCTGAATCAGTCAATGCCTCATCAGTTGAGAATGGAAATGCTGTCGAGAATGCCAACGAGGCTTCTGAGGAACAACA
CTTTGTTGATGGTTCTGTACCTCCACTATCTGCTGAAGAAGATAGATTGTGGAACATTGTGAGGGCCAATTCTTTAGATTTTAATGCATGGACTTCTTTGATCGAAGAGA
CAGAGAAGGTGGCAGAGGATAACATACTCAAAATCCGGAGAGTTTATGATGCCTTTTTAGCGGAATTTCCATTATGCTATGGTTACTGGAAGAAGTATGCAGATCATGAG
GCACGTTTTGGATCTACTGACAAAGTTGTTGAGGTGTATGAACGAGCAGTACATGGAGTCACTTACTCAGTTGATATTTGGCTGCATTACTGCATATTCACTCTTAGTAC
ATATGGAGATCCAGAGACCATCAGAAGGCTTTTTGAGAGAGGATTAGCTTATGTTGGGACAGATTACCTCTCCTTTCCCCTTTGGGATAAATATATTGAATATGAGTACA
TGCAGCAGGAATGGGGTCGCCTTGCCATGATATACACACGTATACTGGAAAATCCAAATCAACAGTTGGACCGGTATTTCAATAGTGATCTGAGTTCTTTTGCTTTTGAA
CTATGGGAACAGAGTTCTTTTGATTTGCTACTCTTTAAGGAGTTAGCTGCAAGTCGCCCATTGTCAGAATTGAAGAATTCTGAGGAGGCTGTAGTAGATGTGCAATCAGA
GGCTGGTGATCAAGTAAATGGGGAGGAAGATGCCACGGAACCATCATCTAAAACTGTAAGTGCTGGCTTAACAGAAGCAGAGGAGTTGGAGAAGTATATCGCCATTAGAG
AAGAAATCTATAAGAAAGCTAAAGAGTTCGATTCTAAGATCATTGGTTTTGAAACAGCTATCAGAAGGCCCTACTTTCATGTTCGGCCACTAAATGTTGCAGAGCTTGAT
AATTGGCATAGTTACCTGGATTTTATAGAACAAGAAGGAGACTTAAACAAGGTGGTGAAGTTATACGAGAGATGTGTTATTGCTTGTGCCAACTATCCTGAGTACTGGAT
ACGGTATATTTTATGCATGCAAGCAAGTGACAATATGGATCTTGCCAATAACGCCCTTGCTCGGGGAAGCCAAGTTTTTGTCAAGGTTCCAAGTCGAGAGGCCTTCACTG
AGCCACTCATCAATCTGTTTGGGGAGGCAGAAGGAGATCCCCAAAAGTCTAGCAATGAAATTCCAAGCTCTCCACGCAAAATCACAATGGATAAACAAGTGGTCAAGATT
ACTGGTGGTAGCTCTGATTTTGGGGGAAGATTTTGCCAGCTTGTGGAAAAGAGACTTAGTCGAGTACTTGCCCGAACCTTCAAGGGATCAATTAACCGAGTCTGCCTCTT
GCCCAATGTGAATGTTTTGAAGCTTTTCCACCAAAGCCACCCAGGTGGTGATTTCCCTCTCAAAAAGGCCTCTTCTGAAGGCTAA

mRNA sequence

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Protein sequence

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MGDSETVVAQTSEVMGYTSAGYVSSGFADSSTNLIPHPGAFQSVITGDFSVSPTSADMGGSDAYVTDPNSIQQGNHVGEVDETKAGVVATDHSKNAAVSENSAMESAEVV
DHDSTLNGSVAAESVNASSVENGNAVENANEASEEQHFVDGSVPPLSAEEDRLWNIVRANSLDFNAWTSLIEETEKVAEDNILKIRRVYDAFLAEFPLCYGYWKKYADHE
ARFGSTDKVVEVYERAVHGVTYSVDIWLHYCIFTLSTYGDPETIRRLFERGLAYVGTDYLSFPLWDKYIEYEYMQQEWGRLAMIYTRILENPNQQLDRYFNSDLSSFAFE
LWEQSSFDLLLFKELAASRPLSELKNSEEAVVDVQSEAGDQVNGEEDATEPSSKTVSAGLTEAEELEKYIAIREEIYKKAKEFDSKIIGFETAIRRPYFHVRPLNVAELD
NWHSYLDFIEQEGDLNKVVKLYERCVIACANYPEYWIRYILCMQASDNMDLANNALARGSQVFVKVPSREAFTEPLINLFGEAEGDPQKSSNEIPSSPRKITMDKQVVKI
TGGSSDFGGRFCQLVEKRLSRVLARTFKGSINRVCLLPNVNVLKLFHQSHPGGDFPLKKASSEG

Spg015101 (gene) of Sponge gourd (cylindrica) v1 genome