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Spg015117 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015117
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZinc finger (C3HC4-type RING finger) family protein
Genome locationscaffold3:29809611..29810026
RNA-Seq ExpressionSpg015117
SyntenySpg015117
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019278.1 hypothetical protein SDJN02_18238, partial [Cucurbita argyrosperma subsp. argyrosperma]3.0e-2278.75Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSKFG
        M STWKK+KLALG NMCLY P N  DSLPSM SRFSDA  PSNLLS  SF SDC PP TPTSSSS LRLSKSSTRSSK G
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSKFG

XP_004139556.1 E3 ubiquitin-protein ligase WAV3 [Cucumis sativus]3.4e-2688.46Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MGSTWKKVK+ALGLNMCLYGPRNL DSLPSMASR SDAV P NLLS  SFSSDCRP ATPTSSSS LRLSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

XP_008462750.1 PREDICTED: uncharacterized protein LOC103501034 isoform X1 [Cucumis melo]2.9e-2585.9Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MGSTWKKVK+ALGLNMCLYGPRNL DSLPS+ASR SDA  P NLLS  SFSSDCRP ATPTSSSS LRLSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

XP_022152920.1 uncharacterized protein LOC111020532 [Momordica charantia]2.4e-2483.33Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MG+TWKK+K+ALG NMCLYGPRNL+DSLPS+ASRFSDAV PSN LSP SF SDCR PATPTSSSS L LSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

XP_038894753.1 E3 ubiquitin-protein ligase WAV3-like [Benincasa hispida]2.4e-2789.74Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MGSTWKKVK+ALGLNMCLYGPRNL DSLPSMASRFSDA  PSNLLSP SFSSDCRP ATPT SSSSLRLSK STRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

TrEMBL top hitse value%identityAlignment
A0A0A0LXX5 Uncharacterized protein1.6e-2688.46Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MGSTWKKVK+ALGLNMCLYGPRNL DSLPSMASR SDAV P NLLS  SFSSDCRP ATPTSSSS LRLSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

A0A1S3CHN5 uncharacterized protein LOC103501034 isoform X11.4e-2585.9Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MGSTWKKVK+ALGLNMCLYGPRNL DSLPS+ASR SDA  P NLLS  SFSSDCRP ATPTSSSS LRLSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

A0A5A7SVZ9 Uncharacterized protein1.4e-2585.9Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MGSTWKKVK+ALGLNMCLYGPRNL DSLPS+ASR SDA  P NLLS  SFSSDCRP ATPTSSSS LRLSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

A0A6J1DFB3 uncharacterized protein LOC1110205321.2e-2483.33Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MG+TWKK+K+ALG NMCLYGPRNL+DSLPS+ASRFSDAV PSN LSP SF SDCR PATPTSSSS L LSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

A0A6J1HPN5 uncharacterized protein LOC1114648992.5e-2279.49Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        M STWKK+KLALG NMCLY P N  DSLPSM SRFSDA  PSNLLS  SF SDC PP TPTSSSS LRLSKSSTRSSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38970.1 Zinc finger (C3HC4-type RING finger) family protein5.3e-0947.5Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMAS--RFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        MG+ W+++KLALGLN+C Y PR LE+S   + S  R SD      LLSP ++      P TPT SS  L+LS++S++SSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMAS--RFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

AT3G54780.1 Zinc finger (C3HC4-type RING finger) family protein3.6e-1048.72Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        M S WKK+KLAL LN+C Y PR LE+  PS+A   ++ +  + LLSP ++      P TPT SS   RLS+SS++SSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

AT3G54780.2 Zinc finger (C3HC4-type RING finger) family protein3.6e-1048.72Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        M S WKK+KLAL LN+C Y PR LE+  PS+A   ++ +  + LLSP ++      P TPT SS   RLS+SS++SSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

AT3G54780.3 Zinc finger (C3HC4-type RING finger) family protein3.6e-1048.72Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK
        M S WKK+KLAL LN+C Y PR LE+  PS+A   ++ +  + LLSP ++      P TPT SS   RLS+SS++SSK
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSK

AT5G60710.1 Zinc finger (C3HC4-type RING finger) family protein4.8e-1049.35Show/hide
Query:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSS
        MGS W+K K+ALGLN+CLY P+ LEDS P    R  DAV  S ++         + P+TPT SSS LRL +S ++SS
Subjt:  MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCCACATGGAAGAAGGTGAAACTGGCTCTCGGCTTGAATATGTGCCTCTATGGCCCTCGGAATCTCGAGGATTCTTTGCCTTCTATGGCTTCTAGATTC
TCCGACGCCGTCCAGCCGTCCAATTTGCTTTCTCCGCCCAGTTTTAGCTCCGACTGCCGCCCGCCAGCCACGCCCACTTCGTCGTCTTCCAGCCTCCGGCTCTCC
AAATCCTCAACCAGATCCTCCAAGTTTGGTGGATTTTCTGAAAAGGATTTTGGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCCACATGGAAGAAGGTGAAACTGGCTCTCGGCTTGAATATGTGCCTCTATGGCCCTCGGAATCTCGAGGATTCTTTGCCTTCTATGGCTTCTAGATTC
TCCGACGCCGTCCAGCCGTCCAATTTGCTTTCTCCGCCCAGTTTTAGCTCCGACTGCCGCCCGCCAGCCACGCCCACTTCGTCGTCTTCCAGCCTCCGGCTCTCC
AAATCCTCAACCAGATCCTCCAAGTTTGGTGGATTTTCTGAAAAGGATTTTGGTGAATAA
Protein sequenceShow/hide protein sequence
MGSTWKKVKLALGLNMCLYGPRNLEDSLPSMASRFSDAVQPSNLLSPPSFSSDCRPPATPTSSSSSLRLSKSSTRSSKFGGFSEKDFGE