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Spg015126 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015126
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationscaffold3:40284107..40284676
RNA-Seq ExpressionSpg015126
SyntenySpg015126
Gene Ontology termsGO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586435.1 hypothetical protein SDJN03_19168, partial [Cucurbita argyrosperma subsp. sororia]4.9e-3085.11Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASLK VSRLSSRLHS   KLNKRSSSS+ SPFKSTCQS+ S  S+SRLSCTSRLPLELSSQGSLMPLHSAI+AARLISSL IES+GWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

KAG7021289.1 hypothetical protein SDJN02_17977 [Cucurbita argyrosperma subsp. argyrosperma]2.2e-3086.17Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASLK VSRLSSRLHS   KLNKRSSSS+ SPFKSTCQS+ S  S+SRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSL IES+GWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

KAG7030432.1 hypothetical protein SDJN02_08779, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-3079.61Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGSDHSSG
        MASL+ VSRLSSRL S   KLNKRS SSELSPFKS CQSQ S  S+SR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG+  +  
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGSDHSSG

Query:  QVQ
        QV+
Subjt:  QVQ

XP_023547330.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]4.9e-3085.11Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASL+ VSRLSSRL S   KLNKRS SSELSPFKS+CQSQ S  S+SR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

XP_038889658.1 uncharacterized protein LOC120079520 [Benincasa hispida]1.3e-3087.23Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASLKTVSRLSSRL S   K NKRSS SELSPFKS CQSQ ST S+SRL CTSRLP+ELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein1.5e-2985.11Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASLK VSRLSSRL S   K NKRSSSSEL  FKSTCQSQ S  S+SRL CTSRLP+ELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

A0A6J1FCN7 uncharacterized protein LOC1114444072.6e-2985.11Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASLK VSRLSSRLHS   KLNKRSSSS+ SPFKST QS+ S  S+SRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSL IES+GWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

A0A6J1G399 uncharacterized protein LOC1114503803.1e-3085.11Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASL+ VSRLSSRL S   KLNKRS SSELSPFKS CQSQ S  S+SR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

A0A6J1HLX3 uncharacterized protein LOC1114657373.1e-3084.04Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASL+ VSR+SSRLHS   KLNKRSSSS+ SPFKSTCQS+ S  S+SRLSCTSRLPLELSSQGSLMPLHSAIA+ARLISSLTIES+GWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

A0A6J1KDE2 uncharacterized protein LOC1114938765.3e-3085.11Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MASL+ VSRLSSRL S   KLNKRS SSELSPFKS+CQSQ S  S SR+SCTSRLPLELSSQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein4.8e-1551.06Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MAS   + RLSS++HS   KL+K  ++  +S   S  +S S + ++SR++ + RLP+ELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

AT1G55205.2 unknown protein7.4e-1650.51Show/hide
Query:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGSDHSS
        MAS   + RLSS++HS   KL+K  ++  +S   S  +S S + ++SR++ + RLP+ELS   S++PLHSAIA+ARLISSL++ES+ WGLVPQG   SS
Subjt:  MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGSDHSS

AT1G70350.1 unknown protein2.9e-0446.43Show/hide
Query:  SQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        S SST  S R    SR+P+ELS+  SL+PLHS  A+A L S L++ +Q W  + +G
Subjt:  SQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG

AT3G13674.1 unknown protein1.3e-1253.12Show/hide
Query:  MASLKTVSRLSSRLHSFVLKL-NKRSSSSEL-SPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG
        MAS + + R SSRL S    L NK ++ S L SP KS   +  S+ +S RL+ +SRLP+ELS   S++PLHSAIA++RL+SSL++ES+ WGLVPQG
Subjt:  MASLKTVSRLSSRLHSFVLKL-NKRSSSSEL-SPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAGACAGTCTCTCGGTTATCATCTCGCTTGCACTCTTTTGTTTTGAAGCTCAATAAAAGGTCTTCATCTTCTGAGCTATCTCCATTCAAATCGACTTG
TCAATCACAGTCCTCTACAGTTTCTTCATCGCGTCTTTCTTGCACTTCACGGTTACCATTGGAGTTAAGTAGCCAGGGGTCACTGATGCCATTGCACAGTGCCATTGCTG
CAGCAAGATTGATTTCGAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGATCTGATCATAGTTCAGGTCAAGTTCAATGCATATGTCTTGCGGAATTC
CCGTACGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTTAAAGACAGTCTCTCGGTTATCATCTCGCTTGCACTCTTTTGTTTTGAAGCTCAATAAAAGGTCTTCATCTTCTGAGCTATCTCCATTCAAATCGACTTG
TCAATCACAGTCCTCTACAGTTTCTTCATCGCGTCTTTCTTGCACTTCACGGTTACCATTGGAGTTAAGTAGCCAGGGGTCACTGATGCCATTGCACAGTGCCATTGCTG
CAGCAAGATTGATTTCGAGTCTGACCATTGAATCTCAAGGATGGGGTTTGGTTCCTCAGGGATCTGATCATAGTTCAGGTCAAGTTCAATGCATATGTCTTGCGGAATTC
CCGTACGGTTGA
Protein sequenceShow/hide protein sequence
MASLKTVSRLSSRLHSFVLKLNKRSSSSELSPFKSTCQSQSSTVSSSRLSCTSRLPLELSSQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGSDHSSGQVQCICLAEF
PYG