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Spg015175 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015175
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGATA transcription factor 24-like isoform X1
Genome locationscaffold3:49967993..49970781
RNA-Seq ExpressionSpg015175
SyntenySpg015175
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593599.1 GATA transcription factor 24, partial [Cucurbita argyrosperma subsp. sororia]6.7e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

KAG7013936.1 GATA transcription factor 24 [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0944.8Show/hide
Query:  WALILACYHPI--TPGISKDMPSGSTMGPFLITLFADLVSKGSELPSLIFLFPFLLIICIAMN-----CK-----------------GTLRDLSKAPNQA
        WA + AC      + G  KDMPS ST       LFAD V+KG+   S  +   +L+ +    N     CK                 GTLRDLSKAPNQ 
Subjt:  WALILACYHPI--TPGISKDMPSGSTMGPFLITLFADLVSKGSELPSLIFLFPFLLIICIAMN-----CK-----------------GTLRDLSKAPNQA

Query:  GQASTFNRNETVVQNGDSEPNPKSA
        GQAS+F+RNE VVQNGDSE NPK A
Subjt:  GQASTFNRNETVVQNGDSEPNPKSA

XP_022964237.1 GATA transcription factor 24-like isoform X3 [Cucurbita moschata]6.7e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

XP_022999961.1 GATA transcription factor 28-like isoform X1 [Cucurbita maxima]6.7e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

XP_022999963.1 GATA transcription factor 28-like isoform X2 [Cucurbita maxima]6.7e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

TrEMBL top hitse value%identityAlignment
A0A6J1HHA6 GATA transcription factor 24-like isoform X33.2e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

A0A6J1HK95 GATA transcription factor 24-like isoform X13.2e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

A0A6J1JVG1 GATA transcription factor 24-like isoform X57.2e-0987.18Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ+GQAS+FNRNE VVQNGDSE NPK A
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

A0A6J1KC72 GATA transcription factor 28-like isoform X13.2e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

A0A6J1KL72 GATA transcription factor 28-like isoform X23.2e-0989.74Show/hide
Query:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA
        KGTLRDLSKAPNQ GQAS+FNRNE VVQNGDSE NPKSA
Subjt:  KGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCCCAAAGGAAAAGGCTCTGCTCTATGGATGAAAATCATGGAGGCTAAATTTCTCTACCCATATTGGTCCCAGGCTGGGTACTCTCTCTTCACTCTTCTAAAGGG
CCTTGGAAACACACTATCGAGCATGAGAATCCTGTCTATTCTAGAATCAAAGTCACGGTGGGCCTTGATTCTTGCCTGTTATCATCCAATCACCCCGGGCATATCCAAGG
ATATGCCCTCTGGATCCACAATGGGGCCATTTCTGATTACTCTCTTTGCTGATTTGGTCAGTAAAGGTAGTGAACTGCCCTCCCTTATCTTTTTGTTTCCGTTCCTTCTA
ATAATTTGTATCGCTATGAACTGTAAGGGAACTCTGCGGGACCTCTCAAAAGCACCAAACCAGGCTGGACAAGCTTCAACCTTCAATAGAAATGAGACTGTTGTGCAGAA
TGGAGATTCTGAGCCCAATCCGAAAAGTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGCCCAAAGGAAAAGGCTCTGCTCTATGGATGAAAATCATGGAGGCTAAATTTCTCTACCCATATTGGTCCCAGGCTGGGTACTCTCTCTTCACTCTTCTAAAGGG
CCTTGGAAACACACTATCGAGCATGAGAATCCTGTCTATTCTAGAATCAAAGTCACGGTGGGCCTTGATTCTTGCCTGTTATCATCCAATCACCCCGGGCATATCCAAGG
ATATGCCCTCTGGATCCACAATGGGGCCATTTCTGATTACTCTCTTTGCTGATTTGGTCAGTAAAGGTAGTGAACTGCCCTCCCTTATCTTTTTGTTTCCGTTCCTTCTA
ATAATTTGTATCGCTATGAACTGTAAGGGAACTCTGCGGGACCTCTCAAAAGCACCAAACCAGGCTGGACAAGCTTCAACCTTCAATAGAAATGAGACTGTTGTGCAGAA
TGGAGATTCTGAGCCCAATCCGAAAAGTGCTTAG
Protein sequenceShow/hide protein sequence
MLPKGKGSALWMKIMEAKFLYPYWSQAGYSLFTLLKGLGNTLSSMRILSILESKSRWALILACYHPITPGISKDMPSGSTMGPFLITLFADLVSKGSELPSLIFLFPFLL
IICIAMNCKGTLRDLSKAPNQAGQASTFNRNETVVQNGDSEPNPKSA