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Spg015187 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015187
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGamma-thionin family protein
Genome locationscaffold3:40671593..40672730
RNA-Seq ExpressionSpg015187
SyntenySpg015187
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH10080.1 Gamma-thionin family protein [Prunus dulcis]4.8e-0847.62Show/hide
Query:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN
        +CIA LL +G    P  AI  P VCLG CS+F DC   C  + + +GG C+GF   P  CCCN
Subjt:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN

CAB4291337.1 unnamed protein product [Prunus armeniaca]4.8e-0849.21Show/hide
Query:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN
        +CIA LL +  GP    AI  P VCLG CS F DC   C  + + KGG C+GF   P  CCCN
Subjt:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN

EXC24150.1 hypothetical protein L484_015165 [Morus notabilis]3.7e-0851.02Show/hide
Query:  GSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK
        G A+N P  C+G CS F DC  TC    Y KGG C+GF  S ++CCCN+
Subjt:  GSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK

KAG6575964.1 hypothetical protein SDJN03_26603, partial [Cucurbita argyrosperma subsp. sororia]5.0e-2162.03Show/hide
Query:  MASSFANRSSFFCIVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNKT
        MASSFA RSSF  ++C+AF+L+AGLG +PGSAIN   VCLG CS  P+CE  C + G+ KGGECLGF + P  CCCN T
Subjt:  MASSFANRSSFFCIVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNKT

PIM97201.1 hypothetical protein CDL12_30331 [Handroanthus impetiginosus]1.3e-0843.42Show/hide
Query:  SSFANRSSFFCIVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK
        +S A    F  I+C+  +L++G   K    I  PFVC+G CS+F DC K C  +GY  GG C GF    L CCC K
Subjt:  SSFANRSSFFCIVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK

TrEMBL top hitse value%identityAlignment
A0A2G9FW97 Uncharacterized protein6.2e-0943.42Show/hide
Query:  SSFANRSSFFCIVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK
        +S A    F  I+C+  +L++G   K    I  PFVC+G CS+F DC K C  +GY  GG C GF    L CCC K
Subjt:  SSFANRSSFFCIVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK

A0A4Y1S039 Gamma-thionin family protein2.3e-0847.62Show/hide
Query:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN
        +CIA LL +G    P  AI  P VCLG CS+F DC   C  + + +GG C+GF   P  CCCN
Subjt:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN

A0A5D2PWN7 Uncharacterized protein8.9e-0846.15Show/hide
Query:  IVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK
        I+C+  +L+  LGP    AIN P  CLG CS  P+C ++C D+G+ KGG C+GF    L CCC +
Subjt:  IVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK

A0A6J5VUM4 Uncharacterized protein2.3e-0849.21Show/hide
Query:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN
        +CIA LL +  GP    AI  P VCLG CS F DC   C  + + KGG C+GF   P  CCCN
Subjt:  VCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCN

W9S354 Uncharacterized protein1.8e-0851.02Show/hide
Query:  GSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK
        G A+N P  C+G CS F DC  TC    Y KGG C+GF  S ++CCCN+
Subjt:  GSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27831.1 Gamma-thionin family protein2.0e-0432.47Show/hide
Query:  MASSFANRSSFFCIVCIAFLLMAG--LGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCC
        MASS  ++ +F   +C+  LL            A    ++  G+CS FPDC K C ++G++ GG+CL    + L  C
Subjt:  MASSFANRSSFFCIVCIAFLLMAG--LGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCCTTTGCCAATCGATCTTCATTCTTCTGCATCGTCTGCATTGCTTTCCTTCTCATGGCTGGGCTAGGGCCAAAGCCAGGAAGTGCCATAAATACACCATT
TGTCTGTTTGGGAATATGCTCAAATTTCCCTGACTGTGAGAAAACTTGCCATGATGAAGGATATGTGAAGGGTGGTGAGTGTTTGGGCTTCGACAGATCGCCCCTTTATT
GCTGCTGCAACAAGACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCCTTTGCCAATCGATCTTCATTCTTCTGCATCGTCTGCATTGCTTTCCTTCTCATGGCTGGGCTAGGGCCAAAGCCAGGAAGTGCCATAAATACACCATT
TGTCTGTTTGGGAATATGCTCAAATTTCCCTGACTGTGAGAAAACTTGCCATGATGAAGGATATGTGAAGGGTGGTGAGTGTTTGGGCTTCGACAGATCGCCCCTTTATT
GCTGCTGCAACAAGACCTAA
Protein sequenceShow/hide protein sequence
MASSFANRSSFFCIVCIAFLLMAGLGPKPGSAINTPFVCLGICSNFPDCEKTCHDEGYVKGGECLGFDRSPLYCCCNKT