; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015194 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015194
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCRM domain-containing protein
Genome locationscaffold3:33562744..33565330
RNA-Seq ExpressionSpg015194
SyntenySpg015194
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588422.1 hypothetical protein SDJN03_16987, partial [Cucurbita argyrosperma subsp. sororia]1.2e-10981.16Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD
        MGASIMSS S     HSLLLRSVPSS ST   +PS       AVIS +C HQFKPN+SIFL RQSP+RSRSFTPSASVSF+RSFSST+SD S VGF++ D
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD

Query:  DEIEDEDDSDYEDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE
        D I+D+++SDYEDEVEIEDFELE+  V DGL+T+VAS+S S+VV+ SEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE
Subjt:  DEIEDEDDSDYEDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE

Query:  LLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
        LLKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIYRPS+SKMKAEEEKRRARK+YVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Subjt:  LLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF

XP_004148536.1 uncharacterized protein LOC101213060 [Cucumis sativus]9.3e-11079.65Show/hide
Query:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIED
        MGASI+SSHSHSLLLRS+PSSFST FSKPS     AAA IST CFHQFKP++S  LTR+SP+  R FTPSA +SF+RSFSST+SDPSEV FDEADDEIED
Subjt:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIED

Query:  EDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKV
        +D+SDYEDEVE+ED      VGDG +T VASE  S +++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+
Subjt:  EDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKV

Query:  LGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSR
        LGNCP ELEDVVR+L ESTGSVVVNQIGRTVIIYRPS++KMKAEEEKRRARK+Y+RKEPDRVKSILQ K++TP SSNRGRRG+SR
Subjt:  LGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSR

XP_008448058.1 PREDICTED: uncharacterized protein LOC103490350 [Cucumis melo]1.1e-10778.28Show/hide
Query:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADD
        M ASI+S    SHSHSLLLRSVPSSFST FSKPSAT     A  ST CFHQFKP++S FLTR+SP+ SR FTPS S+SF+R FSSTVS PSEV FDE DD
Subjt:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADD

Query:  EIEDEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
        EIED+D+SDYEDEVE+ED     +VGDG +  VASE  S V+NR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELL
Subjt:  EIEDEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
        KIK+LGNCP +LEDVVR+LEESTGSVVVNQIGRTVIIYRPS++KMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP SSNRGRRG+SR+
Subjt:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF

XP_022971306.1 uncharacterized protein LOC111470060 [Cucurbita maxima]2.7e-10981.16Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD
        MGASIMSS S     HSLLLRSVPSS ST   +PS       AVIS +C HQFKPN+SIFL RQSP+RSRSFTPSASVSF+RSFSS +S  S VGF++ D
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD

Query:  DEIEDEDDSDYEDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE
        D I+D+D+SDYEDEVEIEDFELE+  V DGL+T+VAS+S S+VV+RSEVK+IPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE
Subjt:  DEIEDEDDSDYEDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE

Query:  LLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
        LLKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIYRPS+SKMKAEEEKRRARKIYVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Subjt:  LLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF

XP_023529380.1 uncharacterized protein LOC111792256 [Cucurbita pepo subsp. pepo]2.3e-10879.53Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD
        MGASIMSS S     HSLLLRSVPSS ST  S+PS       A IS +C HQFKPN+SIFL RQSP+RSRSF+PSASVSF+RSFSST+SD S VGF++ D
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD

Query:  DEIEDEDDSDY------EDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIE
        D I+D+D+SDY      EDEVEIEDFELE+  V DGL+T+VAS+S S+VV+RSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIE
Subjt:  DEIEDEDDSDY------EDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIE

Query:  TLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
        TLEANELLKIKVLGNCPGELEDVV+QLEESTGSVVV++IGRTVIIYRPS+SKMKAEEEKRRARK+YVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Subjt:  TLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF

TrEMBL top hitse value%identityAlignment
A0A0A0K2C3 CRM domain-containing protein4.5e-11079.65Show/hide
Query:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIED
        MGASI+SSHSHSLLLRS+PSSFST FSKPS     AAA IST CFHQFKP++S  LTR+SP+  R FTPSA +SF+RSFSST+SDPSEV FDEADDEIED
Subjt:  MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIED

Query:  EDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKV
        +D+SDYEDEVE+ED      VGDG +T VASE  S +++R+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+
Subjt:  EDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKV

Query:  LGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSR
        LGNCP ELEDVVR+L ESTGSVVVNQIGRTVIIYRPS++KMKAEEEKRRARK+Y+RKEPDRVKSILQ K++TP SSNRGRRG+SR
Subjt:  LGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSR

A0A1S3BJF7 uncharacterized protein LOC1034903505.5e-10878.28Show/hide
Query:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADD
        M ASI+S    SHSHSLLLRSVPSSFST FSKPSAT     A  ST CFHQFKP++S FLTR+SP+ SR FTPS S+SF+R FSSTVS PSEV FDE DD
Subjt:  MGASIMS----SHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADD

Query:  EIEDEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL
        EIED+D+SDYEDEVE+ED     +VGDG +  VASE  S V+NR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELL
Subjt:  EIEDEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELL

Query:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
        KIK+LGNCP +LEDVVR+LEESTGSVVVNQIGRTVIIYRPS++KMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP SSNRGRRG+SR+
Subjt:  KIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF

A0A5D3DFJ1 Putative RNA-binding CRS1 / YhbY domain protein4.3e-6885.8Show/hide
Query:  LQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVV
        ++T VASE  S V+NR+EVKNIPSLT+KEKKELASYAH LGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK+LGNCP ELEDVVR+LEESTGSVVV
Subjt:  LQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVV

Query:  NQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
        NQIGRTVIIYRPS++KMKAEEEKRR+RKIY+RKEPDRVKSILQ K++TP SSNRGRRG+SR+
Subjt:  NQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF

A0A6J1C409 uncharacterized protein LOC1110077236.0e-7081.82Show/hide
Query:  DSDYEDEVEIEDFEL-EEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL
        DSDYE EV I DFEL EE++G   Q    S+  SSVVN SEVKN+PSLTVKEKKELASYAHSLGKKLK+QLVGKSGVTPGLA SF+ETLEANELLKIK+L
Subjt:  DSDYEDEVEIEDFEL-EEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVL

Query:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPG--SSNRGRRGSSRF
         NCP EL+D VRQLEESTGSVVV+QIGRTVIIYRPS+SKMKAEE+KR+ARKIYVRKEPDRVKSILQNK+QTPG  +SNRGRRGSSRF
Subjt:  GNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPG--SSNRGRRGSSRF

A0A6J1I2Z3 uncharacterized protein LOC1114700601.3e-10981.16Show/hide
Query:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD
        MGASIMSS S     HSLLLRSVPSS ST   +PS       AVIS +C HQFKPN+SIFL RQSP+RSRSFTPSASVSF+RSFSS +S  S VGF++ D
Subjt:  MGASIMSSHS-----HSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEAD

Query:  DEIEDEDDSDYEDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE
        D I+D+D+SDYEDEVEIEDFELE+  V DGL+T+VAS+S S+VV+RSEVK+IPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE
Subjt:  DEIEDEDDSDYEDEVEIEDFELEE-AVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANE

Query:  LLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF
        LLKIKVLGNCPGELEDVVRQLEESTGSVVV++IGRTVIIYRPS+SKMKAEEEKRRARKIYVRKEPDRVK  LQNK+QTP SSNRGRRGSSRF
Subjt:  LLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF

SwissProt top hitse value%identityAlignment
P0AGK4 RNA-binding protein YhbY2.9e-0531.11Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS

P0AGK5 RNA-binding protein YhbY2.9e-0531.11Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS

P0AGK6 RNA-binding protein YhbY2.9e-0531.11Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   L+G +G+T G+     + LE +EL+K+K+          +V  +   TG+  V  IG+T+++YRP+
Subjt:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS

P54454 Probable RNA-binding protein YqeI2.2e-0837.5Show/hide
Query:  LTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAE
        LT K+K+ L S AH L    +   VGK GV   +     E LEA EL+K+ VL NC  +  DV   L + + S +V  IG T+++Y+ S    + E
Subjt:  LTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAE

P71376 RNA-binding protein HI_13339.4e-0428.89Show/hide
Query:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS
        +L+ K+K+ L   AH L   +   ++G +G+T G+       L  +EL+K+KV G      + ++  +   T +  V  IG  +++YRPS
Subjt:  SLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPS

Arabidopsis top hitse value%identityAlignment
AT2G21350.1 RNA-binding CRS1 / YhbY (CRM) domain protein2.7e-3053.33Show/hide
Query:  DEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK
        DE + D ED V +    L E   DG +    SE     +  +   +   L+ KEK++LASYAH LG KLKSQLVGKSGVT  +  SF+ETLE NELLK+K
Subjt:  DEDDSDYEDEVEIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIK

Query:  VLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRR
        +   CPGELED++ +LEE+TGSV V QI RTVI+YRPS +K+KA+E+K+R
Subjt:  VLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRR

AT4G39040.1 RNA-binding CRS1 / YhbY (CRM) domain protein1.4e-3440.6Show/hide
Query:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDE
        AS  S+H  H+LL    P S   LF +P       +A +S S  H+ KP    F ++  P  S S          +SFSS + +P     +E++DE    
Subjt:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDE

Query:  DDSDYEDEVEIEDFELEEAVGD-GLQTSVASESPSSVVNRSEVK----------NIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETL
        ++ +YEDE E ++ +    V + G++ S ASE  S + ++ E            +   L++KEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETL
Subjt:  DDSDYEDEVEIEDFELEEAVGD-GLQTSVASESPSSVVNRSEVK----------NIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETL

Query:  EANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGS---SNRGRRGSSR
        E NELLK+K+    P ELED V+ LEE+TGSV V QIGRTVI+YRPS +KMKAE +K+   ++ + +      +      +   S     RGRRG SR
Subjt:  EANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGS---SNRGRRGSSR

AT4G39040.2 RNA-binding CRS1 / YhbY (CRM) domain protein3.1e-3442.32Show/hide
Query:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDE
        AS  S+H  H+LL    P S   LF +P       +A +S S  H+ KP    F ++  P  S S          +SFSS + +P     +E++DE    
Subjt:  ASIMSSH-SHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDE

Query:  DDSDYEDEVEIEDFELEEAVGD-GLQTSVASESPSSVVNRSEVK----------NIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETL
        ++ +YEDE E ++ +    V + G++ S ASE  S + ++ E            +   L++KEKKELASYAHSLG KLK QLVGKSGVT  +  SF+ETL
Subjt:  DDSDYEDEVEIEDFELEEAVGD-GLQTSVASESPSSVVNRSEVK----------NIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETL

Query:  EANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRK
        E NELLK+K+    P ELED V+ LEE+TGSV V QIGRTVI+YRPS +KMKAE +K+   ++ + +
Subjt:  EANELLKIKVLGNCPGELEDVVRQLEESTGSVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGC
CGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTT
CCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTT
GAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCC
TAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTA
CTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGC
TCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAA
AGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCGTCGATAATGTCCTCTCACTCTCACTCTCTTCTTCTCCGCTCAGTTCCTTCTTCTTTCTCCACCCTCTTCTCTAAACCTTCCGCCACCGCCGTCGCCGCCGC
CGCCGTCATCTCTACCTCTTGCTTCCATCAATTTAAACCCAACACTTCGATCTTCCTCACTCGCCAGTCTCCTTACCGTTCCCGGTCTTTTACTCCCTCGGCATCCGTTT
CCTTCACTCGCTCCTTCTCCTCCACCGTTTCCGATCCCTCTGAGGTCGGATTTGACGAAGCAGACGATGAAATTGAAGATGAAGACGACAGTGATTACGAAGATGAAGTT
GAAATCGAAGATTTCGAACTGGAAGAGGCCGTTGGGGATGGATTGCAAACTAGTGTGGCTTCGGAGTCGCCTTCGTCGGTGGTGAATAGAAGTGAAGTGAAGAATATTCC
TAGCTTGACGGTTAAGGAGAAGAAGGAGTTGGCGTCGTACGCTCATAGCTTGGGGAAGAAGCTGAAGAGCCAGTTGGTGGGGAAGTCTGGCGTCACTCCTGGTTTGGCTA
CTTCTTTCATCGAGACACTTGAAGCCAACGAGCTTCTCAAGATCAAAGTTCTTGGGAACTGTCCAGGGGAGCTGGAGGATGTGGTGAGGCAATTGGAGGAATCAACTGGC
TCTGTGGTGGTGAATCAAATTGGGAGAACTGTTATTATTTATAGGCCCAGCGTCTCAAAAATGAAAGCGGAGGAAGAAAAACGGCGAGCCCGAAAAATTTATGTGAGAAA
AGAACCCGATCGAGTGAAATCCATTTTGCAGAATAAATTACAGACACCTGGGAGCTCGAACCGTGGTCGTCGTGGAAGCAGCAGGTTTTGA
Protein sequenceShow/hide protein sequence
MGASIMSSHSHSLLLRSVPSSFSTLFSKPSATAVAAAAVISTSCFHQFKPNTSIFLTRQSPYRSRSFTPSASVSFTRSFSSTVSDPSEVGFDEADDEIEDEDDSDYEDEV
EIEDFELEEAVGDGLQTSVASESPSSVVNRSEVKNIPSLTVKEKKELASYAHSLGKKLKSQLVGKSGVTPGLATSFIETLEANELLKIKVLGNCPGELEDVVRQLEESTG
SVVVNQIGRTVIIYRPSVSKMKAEEEKRRARKIYVRKEPDRVKSILQNKLQTPGSSNRGRRGSSRF