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Spg015202 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015202
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionE3 ubiquitin-protein ligase PRT1
Genome locationscaffold3:40415526..40416173
RNA-Seq ExpressionSpg015202
SyntenySpg015202
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025276.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita argyrosperma subsp. argyrosperma]3.3e-1465.38Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LS+ RPIFSLLRF  QFFRRF S  FSR+LSMAD ++LDDVDSDDIPHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

XP_022148101.1 E3 ubiquitin-protein ligase PRT1 isoform X2 [Momordica charantia]9.5e-1465.38Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LSLHRPIFSL RFSSQF RRF S  FS S SMAD QLLDDVD +D+PHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

XP_022960374.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita moschata]3.3e-1465.38Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LS+ RPIFSLLRF  QFFRRF S  FSR+LSMAD ++LDDVDSDDIPHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

XP_023005016.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita maxima]1.5e-1466.67Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LS+ RPIFSLLRF  QFFRRF S  FSRSLSMAD ++LDDVDSDDIPHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

XP_023515020.1 E3 ubiquitin-protein ligase PRT1 [Cucurbita pepo subsp. pepo]3.3e-1465.38Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LS+ RPIFSLLRF  QFFRRF S  FSR+LSMAD ++LDDVDSDDIPHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

TrEMBL top hitse value%identityAlignment
A0A1S3C6B5 E3 ubiquitin-protein ligase PRT1 isoform X22.5e-1260.26Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M  SLHR  FSLLRF SQFF  F S  FS +LSMA++Q+LDDVD+DDIPHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

A0A6J1D350 E3 ubiquitin-protein ligase PRT1 isoform X14.6e-1465.38Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LSLHRPIFSL RFSSQF RRF S  FS S SMAD QLLDDVD +D+PHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

A0A6J1D4D0 E3 ubiquitin-protein ligase PRT1 isoform X24.6e-1465.38Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LSLHRPIFSL RFSSQF RRF S  FS S SMAD QLLDDVD +D+PHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

A0A6J1HAU1 E3 ubiquitin-protein ligase PRT11.6e-1465.38Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LS+ RPIFSLLRF  QFFRRF S  FSR+LSMAD ++LDDVDSDDIPHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

A0A6J1KS10 E3 ubiquitin-protein ligase PRT17.1e-1566.67Show/hide
Query:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC
        M LS+ RPIFSLLRF  QFFRRF S  FSRSLSMAD ++LDDVDSDDIPHAFLC VCL        L    IS C WC
Subjt:  MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCL--------LGIRIISYCQWC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCTCTCTCTTCACCGCCCTATCTTCTCTCTCCTTCGATTTTCGTCCCAATTTTTCAGAAGATTCACCTCTTGCATCTTCTCCAGAAGCTTGTCAATGGCGGATTT
TCAGTTGCTTGACGATGTGGACTCCGACGACATTCCTCACGCATTTCTCTGCGGTGTCTGCCTGTTAGGAATTAGGATAATCAGTTATTGTCAATGGTGCCCCGGAATTT
GCCCTGGTTTGATGATTGAGTTGGTAGTCGATTTTAATGGCTGGAGGACCGTACTTTGCCAATGCAAATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCTCTCTCTTCACCGCCCTATCTTCTCTCTCCTTCGATTTTCGTCCCAATTTTTCAGAAGATTCACCTCTTGCATCTTCTCCAGAAGCTTGTCAATGGCGGATTT
TCAGTTGCTTGACGATGTGGACTCCGACGACATTCCTCACGCATTTCTCTGCGGTGTCTGCCTGTTAGGAATTAGGATAATCAGTTATTGTCAATGGTGCCCCGGAATTT
GCCCTGGTTTGATGATTGAGTTGGTAGTCGATTTTAATGGCTGGAGGACCGTACTTTGCCAATGCAAATGGTGA
Protein sequenceShow/hide protein sequence
MILSLHRPIFSLLRFSSQFFRRFTSCIFSRSLSMADFQLLDDVDSDDIPHAFLCGVCLLGIRIISYCQWCPGICPGLMIELVVDFNGWRTVLCQCKW