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Spg015218 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015218
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGATA transcription factor 15-like
Genome locationscaffold3:45115896..45116396
RNA-Seq ExpressionSpg015218
SyntenySpg015218
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0008270 - zinc ion binding (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR000679 - Zinc finger, GATA-type
IPR013088 - Zinc finger, NHR/GATA-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046674.1 GATA transcription factor 15-like [Cucumis melo var. makuwa]1.0e-4066.46Show/hide
Query:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN--------GKGK
        MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR    SLCNACGIRYRK+K   NN G + N        GKGK
Subjt:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN--------GKGK

Query:  KV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        K+ GGGSLK+RV+  GREI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  KV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

XP_008451515.1 PREDICTED: GATA transcription factor 15-like [Cucumis melo]3.0e-4064.81Show/hide
Query:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN------------
        MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR    SLCNACGIRYRK+K   NN G + N            
Subjt:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN------------

Query:  GKGKKV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        GKGKK+ GGGSLK+RV+  GREI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  GKGKKV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

XP_022959984.1 GATA transcription factor 15-like [Cucurbita moschata]1.9e-4778.77Show/hide
Query:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVR
        MAFF+ NHP+LSGSTFNP SLMAIS+QGL+ IEPQKQR C  CRTTRTPLWRAGPAGPR    SLCNACGIRYRKLKN NGGV K+  GKKV      VR
Subjt:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVR

Query:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        V+G GREI+LHRAT AMAENG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS

XP_023004687.1 GATA transcription factor 15-like [Cucurbita maxima]1.9e-4778.08Show/hide
Query:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK-NNGGVIKNGKGKKVGGGSLKVR
        MAFF+ NHP+LSGSTFNP SLMAIS+QGL+  EPQKQR C  CRTTRTPLWRAGPAGPR    SLCNACGIRYRKLK NNGGV K+G GKKV      VR
Subjt:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK-NNGGVIKNGKGKKVGGGSLKVR

Query:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        V+G GREI+LHR T AMAENG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS

XP_023515141.1 GATA transcription factor 15-like [Cucurbita pepo subsp. pepo]4.3e-4778.08Show/hide
Query:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVR
        MAFF+ NHP+LSGSTFNP SLMAIS+ GL+ IEPQKQR C  CRTTRTPLWRAGPAGPR    SLCNACGIRYRKLKN NGGV K+G GKKV      VR
Subjt:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVR

Query:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        V+  GREI+LHRAT AMAENG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS

TrEMBL top hitse value%identityAlignment
A0A0A0K6B1 GATA-type domain-containing protein1.0e-3865.61Show/hide
Query:  MAFFVNH-PNLSGSTFN-PSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK----NNGGVIKN-----GKGKK
        +AF +N   +LS STFN PSLM A+S +GL+ +E +KQRACV CR TRTPLWRAGPAGPR    SLCNACGIRYRK+K    NNGGV  N     GKGKK
Subjt:  MAFFVNH-PNLSGSTFN-PSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK----NNGGVIKN-----GKGKK

Query:  VG--GGSLKVRVMGFGREIVLHRATAMAE--NGVAEPIGEEEQAAAMLLMALSSGYV
        +G  GGSLKVRV+  GREI++HR T   E  N VAE IGEEEQ AA+LLMALSSGYV
Subjt:  VG--GGSLKVRVMGFGREIVLHRATAMAE--NGVAEPIGEEEQAAAMLLMALSSGYV

A0A1S3BSR7 GATA transcription factor 15-like1.4e-4064.81Show/hide
Query:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN------------
        MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR    SLCNACGIRYRK+K   NN G + N            
Subjt:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN------------

Query:  GKGKKV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        GKGKK+ GGGSLK+RV+  GREI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  GKGKKV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

A0A5A7TUD0 GATA transcription factor 15-like4.9e-4166.46Show/hide
Query:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN--------GKGK
        MAF +N   + S STFNPSLM A+S QGL  +E +KQRACV CR TRTPLWRAGPAGPR    SLCNACGIRYRK+K   NN G + N        GKGK
Subjt:  MAFFVNH-PNLSGSTFNPSLM-AISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK---NNGGVIKN--------GKGK

Query:  KV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        K+ GGGSLK+RV+  GREI++HR   TAM +NGVAE IGEEEQ AAMLLMALSSGYVS
Subjt:  KV-GGGSLKVRVMGFGREIVLHR--ATAMAENGVAEPIGEEEQAAAMLLMALSSGYVS

A0A6J1H9M3 GATA transcription factor 15-like9.3e-4878.77Show/hide
Query:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVR
        MAFF+ NHP+LSGSTFNP SLMAIS+QGL+ IEPQKQR C  CRTTRTPLWRAGPAGPR    SLCNACGIRYRKLKN NGGV K+  GKKV      VR
Subjt:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKN-NGGVIKNGKGKKVGGGSLKVR

Query:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        V+G GREI+LHRAT AMAENG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS

A0A6J1KR45 GATA transcription factor 15-like9.3e-4878.08Show/hide
Query:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK-NNGGVIKNGKGKKVGGGSLKVR
        MAFF+ NHP+LSGSTFNP SLMAIS+QGL+  EPQKQR C  CRTTRTPLWRAGPAGPR    SLCNACGIRYRKLK NNGGV K+G GKKV      VR
Subjt:  MAFFV-NHPNLSGSTFNP-SLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK-NNGGVIKNGKGKKVGGGSLKVR

Query:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS
        V+G GREI+LHR T AMAENG AE IGEEEQAAAMLLMALSSGYVS
Subjt:  VMGFGREIVLHRAT-AMAENGVAEPIGEEEQAAAMLLMALSSGYVS

SwissProt top hitse value%identityAlignment
Q5HZ36 GATA transcription factor 211.4e-0865Show/hide
Query:  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK
        R C DC TT+TPLWR+GP GP+    SLCNACGIR RK +
Subjt:  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK

Q6YW48 Protein CYTOKININ-RESPONSIVE GATA TRANSCRIPTION FACTOR 14.8e-0957.14Show/hide
Query:  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNG
        R C DC TT+TPLWR+GP GP+    SLCNACGIR RK +       NG
Subjt:  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNG

Q8LG10 GATA transcription factor 151.5e-1549.55Show/hide
Query:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEE
        ++++C  C T++TPLWR GPAGP+    SLCNACGIR RK    L +N    K  K        G SLK R+M  GRE+++ R+T  AEN     +GEEE
Subjt:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEE

Query:  QAAAMLLMALS
        Q AA+LLMALS
Subjt:  QAAAMLLMALS

Q9FJ10 GATA transcription factor 162.2e-1449.14Show/hide
Query:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATAMAENGVAEPIGEE
        K++ C DC T++TPLWR GP GP+    SLCNACGIR RK K  GG   N K KK   GGG      SLK  +M  G   +  R+T   +    + +GEE
Subjt:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATAMAENGVAEPIGEE

Query:  EQAAAMLLMALSSGYV
        EQ AA+LLMALS G V
Subjt:  EQAAAMLLMALSSGYV

Q9LIB5 GATA transcription factor 171.8e-0853.7Show/hide
Query:  QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK
        +R CVDC T RTPLWR GPAGP+    SLCNACGI+ RK +     +++ + KK
Subjt:  QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK

Arabidopsis top hitse value%identityAlignment
AT3G06740.1 GATA transcription factor 151.1e-1649.55Show/hide
Query:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEE
        ++++C  C T++TPLWR GPAGP+    SLCNACGIR RK    L +N    K  K        G SLK R+M  GRE+++ R+T  AEN     +GEEE
Subjt:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRK----LKNNGGVIKNGKGKKVG---GGSLKVRVMGFGREIVLHRATAMAENGVAEPIGEEE

Query:  QAAAMLLMALS
        Q AA+LLMALS
Subjt:  QAAAMLLMALS

AT3G16870.1 GATA transcription factor 171.3e-0953.7Show/hide
Query:  QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK
        +R CVDC T RTPLWR GPAGP+    SLCNACGI+ RK +     +++ + KK
Subjt:  QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK

AT4G16141.1 GATA type zinc finger transcription factor family protein2.0e-1031.74Show/hide
Query:  QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK------------------NNGGV----IKNGKGKKVG-------GGSLKV---------
        ++ CVDC T+RTPLWR GPAGP+    SLCNACGI+ RK +                  NN G+    +K GKG+ V         G +K+         
Subjt:  QRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK------------------NNGGV----IKNGKGKKVG-------GGSLKV---------

Query:  ------------------------RVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALSSG
                                R + FG ++   + +A+ +  +   +GEEE+ AA+LLMALS G
Subjt:  ------------------------RVMGFGREIVLHRATAMAENGVAEPIGEEEQAAAMLLMALSSG

AT5G49300.1 GATA transcription factor 161.6e-1549.14Show/hide
Query:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATAMAENGVAEPIGEE
        K++ C DC T++TPLWR GP GP+    SLCNACGIR RK K  GG   N K KK   GGG      SLK  +M  G   +  R+T   +    + +GEE
Subjt:  KQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKK--VGGG------SLKVRVMGFGREIVLHRATAMAENGVAEPIGEE

Query:  EQAAAMLLMALSSGYV
        EQ AA+LLMALS G V
Subjt:  EQAAAMLLMALSSGYV

AT5G56860.1 GATA type zinc finger transcription factor family protein9.9e-1065Show/hide
Query:  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK
        R C DC TT+TPLWR+GP GP+    SLCNACGIR RK +
Subjt:  RACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTCTTCGTGAACCACCCCAATCTCTCTGGCTCCACCTTCAATCCATCGCTAATGGCCATCTCCAGCCAGGGTCTGGTCGGCATCGAGCCTCAGAAACAGAGGGC
CTGCGTCGACTGTCGCACCACCAGAACCCCCCTCTGGAGAGCCGGTCCTGCCGGCCCAAGGGTAACTATTTTGTCGCTGTGCAATGCATGTGGGATAAGATACAGGAAGC
TGAAGAACAATGGCGGGGTGATCAAGAACGGGAAGGGGAAGAAAGTGGGAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCG
ACGGCGATGGCGGAAAATGGAGTTGCAGAGCCCATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTTTATCTTCCGGCTATGTATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTCTTCGTGAACCACCCCAATCTCTCTGGCTCCACCTTCAATCCATCGCTAATGGCCATCTCCAGCCAGGGTCTGGTCGGCATCGAGCCTCAGAAACAGAGGGC
CTGCGTCGACTGTCGCACCACCAGAACCCCCCTCTGGAGAGCCGGTCCTGCCGGCCCAAGGGTAACTATTTTGTCGCTGTGCAATGCATGTGGGATAAGATACAGGAAGC
TGAAGAACAATGGCGGGGTGATCAAGAACGGGAAGGGGAAGAAAGTGGGAGGAGGATCGTTGAAGGTGAGAGTGATGGGTTTTGGGAGAGAGATAGTGCTGCACAGAGCG
ACGGCGATGGCGGAAAATGGAGTTGCAGAGCCCATCGGAGAAGAAGAACAGGCGGCGGCGATGCTTCTTATGGCTTTATCTTCCGGCTATGTATCATAA
Protein sequenceShow/hide protein sequence
MAFFVNHPNLSGSTFNPSLMAISSQGLVGIEPQKQRACVDCRTTRTPLWRAGPAGPRVTILSLCNACGIRYRKLKNNGGVIKNGKGKKVGGGSLKVRVMGFGREIVLHRA
TAMAENGVAEPIGEEEQAAAMLLMALSSGYVS