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Spg015255 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015255
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein no-on-transient A-like
Genome locationscaffold3:44063774..44064379
RNA-Seq ExpressionSpg015255
SyntenySpg015255
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046715.1 E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]2.8e-1055.67Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF
        MAAI+ LVS+AL+ LL FSE    S + S+SLTG+ HRN+L T AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF

KAA0068047.1 protein no-on-transient A-like [Cucumis melo var. makuwa]1.2e-0852.43Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA
        MAAIK L+ ++L+ LL FSES + SA     ASNS+TGM  RNVLQTA H+IAD+        KMNVHIKR    RIR    G    G+ +SAA+R++ A
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA

Query:  SFG
        SFG
Subjt:  SFG

KAG6575859.1 hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1770.53Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIKRRIRAGLTGGHHRSAANRNRGASFG
        MAA+K LVS+AL+ LLLFSES  ASAV     SNSLTGM  RNVLQTAAH+IADNSVESS  RKMNVHIKRR+R   T G   SAANR+R AS G
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIKRRIRAGLTGGHHRSAANRNRGASFG

KGN44886.1 hypothetical protein Csa_015765 [Cucumis sativus]1.0e-0750.98Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS
        MAAIK L+S++L+ LL FSES + SA     ASNS+T M  RN+LQTA H+IAD+        KMNV IK       R I AG   G   SAANR+R  S
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS

Query:  FG
        FG
Subjt:  FG

XP_008451651.1 PREDICTED: E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo]2.8e-1055.67Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF
        MAAI+ LVS+AL+ LL FSE    S + S+SLTG+ HRN+L T AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF

TrEMBL top hitse value%identityAlignment
A0A0A0KAQ7 Uncharacterized protein4.8e-0850.98Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS
        MAAIK L+S++L+ LL FSES + SA     ASNS+T M  RN+LQTA H+IAD+        KMNV IK       R I AG   G   SAANR+R  S
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIK-------RRIRAGLTGGHHRSAANRNRGAS

Query:  FG
        FG
Subjt:  FG

A0A1S3BRF6 protein no-on-transient A-like2.7e-0640Show/hide
Query:  MAAIKFLVSLALVVLLLFSE-----SPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKM-NVHIK----------------------------
        MAAIK  + ++L+ LL F E      P      SNS+TG+ HR +LQTAAHK A ++VESS  RKM NVH+K                            
Subjt:  MAAIKFLVSLALVVLLLFSE-----SPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKM-NVHIK----------------------------

Query:  ----RRIRAGLTG-GHHRSAANRNRGASFG
            +R   G  G GHH+SAANR+  ASFG
Subjt:  ----RRIRAGLTG-GHHRSAANRNRGASFG

A0A1S3BT53 E3 ubiquitin-protein ligase MIEL1-like1.4e-1055.67Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF
        MAAI+ LVS+AL+ LL FSE    S + S+SLTG+ HRN+L T AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF

A0A5A7VLE5 Protein no-on-transient A-like5.7e-0952.43Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA
        MAAIK L+ ++L+ LL FSES + SA     ASNS+TGM  RNVLQTA H+IAD+        KMNVHIKR    RIR    G    G+ +SAA+R++ A
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAV----ASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIKR----RIRAGLTG----GHHRSAANRNRGA

Query:  SFG
        SFG
Subjt:  SFG

A0A5D3D3Y6 E3 ubiquitin-protein ligase MIEL1-like1.4e-1055.67Show/hide
Query:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF
        MAAI+ LVS+AL+ LL FSE    S + S+SLTG+ HRN+L T AH+I + SVESS  RK N +H K  RRIR    +G  G HH+SA NR+R ASF
Subjt:  MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMN-VHIK--RRIR----AGLTGGHHRSAANRNRGASF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGATCAAATTCCTAGTTTCGCTAGCTCTTGTCGTTCTTCTCTTGTTCTCTGAATCTCCAGCCGCTTCTGCCGTCGCTTCGAATTCCCTTACCGGAATGTTTCA
CCGGAACGTCCTTCAGACGGCGGCTCATAAGATTGCAGATAACAGTGTCGAGTCCTCTGTTGGACGGAAGATGAATGTTCATATCAAAAGGCGGATCCGAGCGGGACTAA
CCGGTGGCCACCACAGATCGGCGGCGAATCGGAACCGAGGCGCGTCCTTTGGCAAGGTGAATATAGATGGTGATGGCGAAGAGCTTCACCTGAGAGAAGAAGATGACGAC
CGAGAAGATCGAAGGTTAGAGGGAAGAGAGATCGACGACGAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCGATCAAATTCCTAGTTTCGCTAGCTCTTGTCGTTCTTCTCTTGTTCTCTGAATCTCCAGCCGCTTCTGCCGTCGCTTCGAATTCCCTTACCGGAATGTTTCA
CCGGAACGTCCTTCAGACGGCGGCTCATAAGATTGCAGATAACAGTGTCGAGTCCTCTGTTGGACGGAAGATGAATGTTCATATCAAAAGGCGGATCCGAGCGGGACTAA
CCGGTGGCCACCACAGATCGGCGGCGAATCGGAACCGAGGCGCGTCCTTTGGCAAGGTGAATATAGATGGTGATGGCGAAGAGCTTCACCTGAGAGAAGAAGATGACGAC
CGAGAAGATCGAAGGTTAGAGGGAAGAGAGATCGACGACGAACCCTAG
Protein sequenceShow/hide protein sequence
MAAIKFLVSLALVVLLLFSESPAASAVASNSLTGMFHRNVLQTAAHKIADNSVESSVGRKMNVHIKRRIRAGLTGGHHRSAANRNRGASFGKVNIDGDGEELHLREEDDD
REDRRLEGREIDDEP