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Spg015320 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015320
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA/RNA polymerases superfamily protein
Genome locationscaffold3:29031255..29033223
RNA-Seq ExpressionSpg015320
SyntenySpg015320
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040420.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa]7.9e-1482.35Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        PRGNR SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTWLELY ESVH+
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]1.4e-1575Show/hide
Query:  VFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        VF +    +PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY ESVH+
Subjt:  VFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0062263.1 hypothetical protein E6C27_scaffold679G00320 [Cucumis melo var. makuwa]7.6e-1760.98Show/hide
Query:  FWTFWGVQVESEA-LVGMVSCRVFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        F   W +  E  A LV + S R+   E  ++PRGNR SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ESVH+
Subjt:  FWTFWGVQVESEA-LVGMVSCRVFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

KAA0067117.1 hypothetical protein E6C27_scaffold38G001760 [Cucumis melo var. makuwa]1.2e-1453.06Show/hide
Query:  FWTFWGVQVESEALVGMVSCRVFENEECDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        FWT W +++ S + + ++  R+   E  ++PRGNRSSLQTGELDKT                 VEIELPVPDTLPTSAES  S+SSTWLELY E VH+
Subjt:  FWTFWGVQVESEALVGMVSCRVFENEECDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

TYJ96965.1 uncharacterized protein E5676_scaffold506G00070 [Cucumis melo var. makuwa]2.6e-1771.05Show/hide
Query:  QVESEALVGMVSCRV-FENEECDV-PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        QVESEAL GMV   + +     ++ PRGNR S QTG+LDKTVEIELPVPDTLPTSAESS S+SSTWLELY ESVH+
Subjt:  QVESEALVGMVSCRV-FENEECDV-PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

TrEMBL top hitse value%identityAlignment
A0A5A7TAS6 NBS-LRR type resistance protein3.8e-1482.35Show/hide
Query:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        PRGNR SLQTG+LDKTVEIELP+PDTLPT AES  S+SSTWLELY ESVH+
Subjt:  PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5A7UAH6 CCHC-type domain-containing protein6.9e-1675Show/hide
Query:  VFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        VF +    +PRGNR +L TG+LDKTVEIELPVPDTLPTSAESS+S+SSTWLELY ESVH+
Subjt:  VFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5A7V2F2 Uncharacterized protein3.7e-1760.98Show/hide
Query:  FWTFWGVQVESEA-LVGMVSCRVFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        F   W +  E  A LV + S R+   E  ++PRGNR SLQ G+L+KTVEIELP+PDTLPTS+ESS+S+SSTWLELY ESVH+
Subjt:  FWTFWGVQVESEA-LVGMVSCRVFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5A7VIY9 Uncharacterized protein5.9e-1553.06Show/hide
Query:  FWTFWGVQVESEALVGMVSCRVFENEECDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        FWT W +++ S + + ++  R+   E  ++PRGNRSSLQTGELDKT                 VEIELPVPDTLPTSAES  S+SSTWLELY E VH+
Subjt:  FWTFWGVQVESEALVGMVSCRVFENEECDVPRGNRSSLQTGELDKT-----------------VEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

A0A5D3BET3 Uncharacterized protein1.3e-1771.05Show/hide
Query:  QVESEALVGMVSCRV-FENEECDV-PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI
        QVESEAL GMV   + +     ++ PRGNR S QTG+LDKTVEIELPVPDTLPTSAESS S+SSTWLELY ESVH+
Subjt:  QVESEALVGMVSCRV-FENEECDV-PRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGGACATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTAGTTGGTAT
GGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTGTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGC
CTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTTCTCTGATGTTTTGGACATTCTGGGGTGTACAAGTTGAATCAGAAGCTCTAGTTGGTAT
GGTAAGTTGTAGAGTGTTCGAAAATGAAGAGTGTGATGTGCCAAGAGGAAATAGGTCGAGTCTACAGACCGGGGAACTAGATAAGACTGTAGAGATCGAGCTCCCGGTGC
CTGATACACTGCCAACGTCTGCTGAAAGTTCTAGATCAAGCTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTCATATTGTAAATGTTTTGTAA
Protein sequenceShow/hide protein sequence
MENRAQDFRAKQEDLWFSLMFWTFWGVQVESEALVGMVSCRVFENEECDVPRGNRSSLQTGELDKTVEIELPVPDTLPTSAESSRSSSSTWLELYIESVHIVNVL