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Spg015360 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015360
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase
Genome locationscaffold10:12648031..12650257
RNA-Seq ExpressionSpg015360
SyntenySpg015360
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]4.6e-0657.14Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGLTGIVRG
        +VEIELPVPDTLPTSAESS S+SS                YF N+VMSG HLV    FNV  G T IVRG
Subjt:  LVEIELPVPDTLPTSAESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGLTGIVRG

KAA0064296.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.7e-0872.22Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG
        +VEIEL VPDTLPTSAES  S+SSYF N+VMSG HLV    FNV  G TGIVRG
Subjt:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG

TYK01041.1 uncharacterized protein E5676_scaffold264G00470 [Cucumis melo var. makuwa]7.5e-0970.37Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG
        +VEIELPVPDTLPTS ESS S+SSYF N+VMSG HLV    FN+    TGIVRG
Subjt:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG

TYK21916.1 hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa]1.6e-0679.49Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV
        +VEIELPVPD LPTSAESS S+SSYF N+VMSG +LVYV
Subjt:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV

TYK27259.1 uncharacterized protein E5676_scaffold244G00260 [Cucumis melo var. makuwa]6.0e-0678.95Show/hide
Query:  VEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV
        VEIELPVPD LPTS ESS S+ SYF N+VMSG HLVYV
Subjt:  VEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV

TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein2.2e-0657.14Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGLTGIVRG
        +VEIELPVPDTLPTSAESS S+SS                YF N+VMSG HLV    FNV  G T IVRG
Subjt:  LVEIELPVPDTLPTSAESSRSSSS----------------YFPNRVMSGRHLVYVERFNVPGGLTGIVRG

A0A5A7VD33 Putative DNA/RNA polymerases superfamily protein8.1e-0972.22Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG
        +VEIEL VPDTLPTSAES  S+SSYF N+VMSG HLV    FNV  G TGIVRG
Subjt:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG

A0A5D3BMJ4 Retrotrans_gag domain-containing protein3.6e-0970.37Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG
        +VEIELPVPDTLPTS ESS S+SSYF N+VMSG HLV    FN+    TGIVRG
Subjt:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRG

A0A5D3DE96 Uncharacterized protein7.6e-0779.49Show/hide
Query:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV
        +VEIELPVPD LPTSAESS S+SSYF N+VMSG +LVYV
Subjt:  LVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV

A0A5D3DV73 Uncharacterized protein2.9e-0678.95Show/hide
Query:  VEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV
        VEIELPVPD LPTS ESS S+ SYF N+VMSG HLVYV
Subjt:  VEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCTCTGGTGTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCT
CTATTTGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTATTTTCCAAACCGAGTTATGTCAGGGCGGCACC
TCGTGTATGTTGAAAGGTTCAACGTTCCAGGAGGGTTAACGGGTATCGTTAGAGGAGGACTATGTTTGTTGGCTTCACGCCATCTTCTGGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTGGAATGGAAAACAGAGCACAGGATTTTCGAGCAAAGCAGGAGGATCTCTGGTTTCTCTGGTGTTTCGAGCATTCTGGGGTGTACAAGTTGAATCAGAAGCT
CTATTTGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAACGTCTGCTGAAAGTTCCAGATCAAGCTCCAGTTATTTTCCAAACCGAGTTATGTCAGGGCGGCACC
TCGTGTATGTTGAAAGGTTCAACGTTCCAGGAGGGTTAACGGGTATCGTTAGAGGAGGACTATGTTTGTTGGCTTCACGCCATCTTCTGGACTAA
Protein sequenceShow/hide protein sequence
MVFGMENRAQDFRAKQEDLWFLWCFEHSGVYKLNQKLYLVEIELPVPDTLPTSAESSRSSSSYFPNRVMSGRHLVYVERFNVPGGLTGIVRGGLCLLASRHLLD