| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] | 2.7e-29 | 69.52 | Show/hide |
Query: LSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESVTFQ------------TRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
LSTLSVLRDNDAVVEIELPVPDTLPTSAE+ S+SSTWLELY ESV + ++VGS GIVRGDDVCWLHAVFRAK AGGPGGGVT
Subjt: LSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESVTFQ------------TRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTT
Query: WYQSS
+ Q+S
Subjt: WYQSS
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| KAA0054351.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.3e-31 | 58.9 | Show/hide |
Query: MQSQPLQDLRSTC-------QPLVFYSVWATQKESRGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESVTFQ-----------
MQSQPLQ+L +T +P S+ + + PLSTLSVLRDNDAVVEI+L VPDTL TSAE+S S+SSTWLELY ESV +
Subjt: MQSQPLQDLRSTC-------QPLVFYSVWATQKESRGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESVTFQ-----------
Query: ---TRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTWYQS
FNV V STGIVRGD+VCWLHAVFRA+ AGG GGGVTTWYQS
Subjt: ---TRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTWYQS
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 6.5e-31 | 73.79 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVPDTLPTSAE+S S+SSTWLELY ESV F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
Query: VTT
VTT
Subjt: VTT
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| TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa] | 9.4e-30 | 71.96 | Show/hide |
Query: LSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV------TFQTR--------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGV
LSTLSVLRDN+AV IELPVPDTLPTSAE+S S+SSTWLELY ESV +F + FNVSVGSTGIVRGDDVCWLHAVFRAK GGPGGGV
Subjt: LSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV------TFQTR--------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGV
Query: TTWYQSS
TTW S+
Subjt: TTWYQSS
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 6.5e-31 | 73.79 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVPDTLPTSAE+S S+SSTWLELY ESV F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
Query: VTT
VTT
Subjt: VTT
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UT17 CCHC-type domain-containing protein | 1.3e-29 | 70.37 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV------TFQTR--------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDN+ V IELPVPD LPTSAE+S S+SSTWLELY ESV +F + FNVSVGSTGIVRGDDVCWLHAVFRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV------TFQTR--------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
Query: VTTWYQSS
VTTW S+
Subjt: VTTWYQSS
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| A0A5A7V9N3 Reverse transcriptase | 3.1e-31 | 73.79 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVPDTLPTSAE+S S+SSTWLELY ESV F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
Query: VTT
VTT
Subjt: VTT
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| A0A5D3CJX3 CCHC-type domain-containing protein | 4.5e-30 | 71.96 | Show/hide |
Query: LSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV------TFQTR--------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGV
LSTLSVLRDN+AV IELPVPDTLPTSAE+S S+SSTWLELY ESV +F + FNVSVGSTGIVRGDDVCWLHAVFRAK GGPGGGV
Subjt: LSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV------TFQTR--------FNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGV
Query: TTWYQSS
TTW S+
Subjt: TTWYQSS
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| A0A5D3CMM1 Reverse transcriptase | 6.3e-32 | 58.9 | Show/hide |
Query: MQSQPLQDLRSTC-------QPLVFYSVWATQKESRGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESVTFQ-----------
MQSQPLQ+L +T +P S+ + + PLSTLSVLRDNDAVVEI+L VPDTL TSAE+S S+SSTWLELY ESV +
Subjt: MQSQPLQDLRSTC-------QPLVFYSVWATQKESRGYIPLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESVTFQ-----------
Query: ---TRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTWYQS
FNV V STGIVRGD+VCWLHAVFRA+ AGG GGGVTTWYQS
Subjt: ---TRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGGVTTWYQS
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| A0A5D3DSY7 Putative Retrotransposon protein | 3.1e-31 | 73.79 | Show/hide |
Query: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
PLSTLSVLRDNDAVVEIELPVPDTLPTSAE+S S+SSTWLELY ESV F+V VGSTGIVRGDDVCWLHAVFRAK GGPGGG
Subjt: PLSTLSVLRDNDAVVEIELPVPDTLPTSAENSRSSSSTWLELYIESV--------------TFQTRFNVSVGSTGIVRGDDVCWLHAVFRAKLAGGPGGG
Query: VTT
VTT
Subjt: VTT
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