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Spg015385 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015385
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold10:11610069..11613965
RNA-Seq ExpressionSpg015385
SyntenySpg015385
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK02142.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.9e-0841.35Show/hide
Query:  MGMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKSFSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAISLTKLAVSR
        MG+L GP+YIVELVNVGCTG ALHNVD S               KS++           +++C S+ ++   S  +QV LEE D   LHA+   KLA  R
Subjt:  MGMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKSFSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAISLTKLAVSR

Query:  QRRD
        +R +
Subjt:  QRRD
TYK08801.1 hypothetical protein E5676_scaffold796G00040 [Cucumis melo var. makuwa]1.3e-1248.11Show/hide
Query:  GMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKS----------FSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAI
        G+  GPHYIV LVNVGCTGR LH++D S   +EIELLVPD LP SA+S          F  +L Y    V   S       SAG    + E+DVCWLHA+
Subjt:  GMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKS----------FSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAI

Query:  SLTKLA
           K+A
Subjt:  SLTKLA
TrEMBL top hitse value%identityAlignment
A0A5D3BTL2 CACTA en-spm transposon protein9.4e-0941.35Show/hide
Query:  MGMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKSFSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAISLTKLAVSR
        MG+L GP+YIVELVNVGCTG ALHNVD S               KS++           +++C S+ ++   S  +QV LEE D   LHA+   KLA  R
Subjt:  MGMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKSFSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAISLTKLAVSR

Query:  QRRD
        +R +
Subjt:  QRRD
A0A5D3CAC6 Uncharacterized protein6.3e-1348.11Show/hide
Query:  GMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKS----------FSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAI
        G+  GPHYIV LVNVGCTGR LH++D S   +EIELLVPD LP SA+S          F  +L Y    V   S       SAG    + E+DVCWLHA+
Subjt:  GMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKS----------FSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAI

Query:  SLTKLA
           K+A
Subjt:  SLTKLA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGCTGAGCGGGCCCCACTACATCGTAGAATTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTTTCATATTTATACGTAGAGATCGAGCT
CTTGGTGCCTGATAAACTGCCAAAGTCTGCTAAAAGCTTCTCGATCAAGCTCCAGTACATGGGTGAAGTTGTACATTGTACTAGTATGTTTATCAGGTTCAATGATTCAG
CAGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGTATCGCGACAGCGTCGCGACGCTGTCCGCAGATTTTCT
ATAAATTCATCATTTTGTGCTACGGATTGGGGGAGTCCAATTGGTGAGATTTTAGCCCTAATTTCGACTAGAGACCTTTTGTGGGAGCTAAAGGCAAGGCCAAGGAGCGG
GAATCAAGCGAGAAGACGTGGAGATCGTGACGGGGACGTTGTTGGATTGATTTGTGGACTTCAAACCCCAAAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGATGTC
TAGTGAGTCATGTGGCCGGTGATTCATTGTCACCCATTCATGAGCTTAATTCTTTCAATCTTGCTAAAGATGAGCATTTAGGGGTGAGTTGCATAAATAATGGGGAAGAA
TTGGAGAGTTGTAGCACCTATCAAGAACATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAAGAGGTAGAGTTTGAGGTTGAAAAACCTTC
GTCTGTTTTATCTTCTCCATCCTTTGTAGATTTTGATTGTTCTTTCTTCTATTCTCACGAACTACACGAGCACGTCGAGCTAATGACGTTAAACAAGCGCTTATTGGAGG
CAACCCAAGTCTTGGTTCCAGTTTCCTCTTTGCTTGCAAGCTTTCATGAAAAAGGTCATCATTCCAGGGCAGTATTGTTCACCCCTTCCATTCTTGATTTGTTCTCATGC
TTGATTATGCCTTATTTTCGTTATACATTGAGGACAATGCATGCTTTAAGTTTGGGGGTGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGCTGAGCGGGCCCCACTACATCGTAGAATTAGTAAACGTTGGTTGTACTGGGCGTGCCCTACACAACGTTGATTTTTCATATTTATACGTAGAGATCGAGCT
CTTGGTGCCTGATAAACTGCCAAAGTCTGCTAAAAGCTTCTCGATCAAGCTCCAGTACATGGGTGAAGTTGTACATTGTACTAGTATGTTTATCAGGTTCAATGATTCAG
CAGGTCAACAGGTATCGTTAGAGGAGGACGATGTCTGTTGGCTTCACGCCATCTCCCTGACTAAGCTAGCAGTATCGCGACAGCGTCGCGACGCTGTCCGCAGATTTTCT
ATAAATTCATCATTTTGTGCTACGGATTGGGGGAGTCCAATTGGTGAGATTTTAGCCCTAATTTCGACTAGAGACCTTTTGTGGGAGCTAAAGGCAAGGCCAAGGAGCGG
GAATCAAGCGAGAAGACGTGGAGATCGTGACGGGGACGTTGTTGGATTGATTTGTGGACTTCAAACCCCAAAGGAAGTTAGTGAGGTGGGATCCACTTCCATAGGATGTC
TAGTGAGTCATGTGGCCGGTGATTCATTGTCACCCATTCATGAGCTTAATTCTTTCAATCTTGCTAAAGATGAGCATTTAGGGGTGAGTTGCATAAATAATGGGGAAGAA
TTGGAGAGTTGTAGCACCTATCAAGAACATGTTTGTGAGGAAGAAAAAGAAAATGAGCTTGCAGTGACAGAGGAAGTTCAAGAGGTAGAGTTTGAGGTTGAAAAACCTTC
GTCTGTTTTATCTTCTCCATCCTTTGTAGATTTTGATTGTTCTTTCTTCTATTCTCACGAACTACACGAGCACGTCGAGCTAATGACGTTAAACAAGCGCTTATTGGAGG
CAACCCAAGTCTTGGTTCCAGTTTCCTCTTTGCTTGCAAGCTTTCATGAAAAAGGTCATCATTCCAGGGCAGTATTGTTCACCCCTTCCATTCTTGATTTGTTCTCATGC
TTGATTATGCCTTATTTTCGTTATACATTGAGGACAATGCATGCTTTAAGTTTGGGGGTGGAATAG
Protein sequenceShow/hide protein sequence
MGMLSGPHYIVELVNVGCTGRALHNVDFSYLYVEIELLVPDKLPKSAKSFSIKLQYMGEVVHCTSMFIRFNDSAGQQVSLEEDDVCWLHAISLTKLAVSRQRRDAVRRFS
INSSFCATDWGSPIGEILALISTRDLLWELKARPRSGNQARRRGDRDGDVVGLICGLQTPKEVSEVGSTSIGCLVSHVAGDSLSPIHELNSFNLAKDEHLGVSCINNGEE
LESCSTYQEHVCEEEKENELAVTEEVQEVEFEVEKPSSVLSSPSFVDFDCSFFYSHELHEHVELMTLNKRLLEATQVLVPVSSLLASFHEKGHHSRAVLFTPSILDLFSC
LIMPYFRYTLRTMHALSLGVE