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Spg015404 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015404
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationscaffold10:15012945..15015922
RNA-Seq ExpressionSpg015404
SyntenySpg015404
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147770.1 uncharacterized protein LOC111016625 [Momordica charantia]1.4e-3656.06Show/hide
Query:  HVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEWKTSEHFVDFEVLPPK
        H VRPIDR+EF+V DG     VN++++TCTC++FD FE+ CSHAIA  +FRN+    LCS  Y++E ++  YAEPVYPLG   +W   + +V   + PPK
Subjt:  HVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEWKTSEHFVDFEVLPPK

Query:  RVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG
         VP VG+ QT RIPS GEVRQVHKC RCGN G
Subjt:  RVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG

XP_022148136.1 uncharacterized protein LOC111016889 [Momordica charantia]1.2e-3550.97Show/hide
Query:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNV-PYLDLCSPCYRVEAVLAAYAEPVY
        +Y E +L  Y D          HVV  ID++  QV DG+L G V+ ++RTC+CREFD F++ CSHAIA  + RN+ PY+ LC   Y   + + AYAEP++
Subjt:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNV-PYLDLCSPCYRVEAVLAAYAEPVY

Query:  PLGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG
        P+GHVS WK+S  FVD  V  P  VPRVG+R+T+RIPSTGEVR+  KC RCG  G
Subjt:  PLGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG

XP_022154610.1 uncharacterized protein LOC111021833 [Momordica charantia]1.2e-3549.04Show/hide
Query:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP
        +Y E     Y+D          HVV  ID++ FQV DG+  G V+++  TC+CREFD F++ CSH IAA + RN+    LC   Y   + + AYAEP++P
Subjt:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP

Query:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG
        +GHVS W +S  FV+  V PPK VPRVG+R T RIPSTGEVRQ  KC RC   G WG
Subjt:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG

XP_022159268.1 uncharacterized protein LOC111025678 [Momordica charantia]7.2e-3649.04Show/hide
Query:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP
        +Y E     Y+D          HVV  ID++ FQV DG+L G V+++   C+CREFD F++ CSHAIAA   RN+    LC   Y   + + AYAEP++P
Subjt:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP

Query:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG
        +GH+S W +S  FV+  V PPK VPRVG+R+T+RIPSTGEVRQ  KC RC   G WG
Subjt:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG

XP_038895917.1 uncharacterized protein LOC120084090 [Benincasa hispida]5.9e-3854.11Show/hide
Query:  HVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEWKTSEHFVDFEVLPPK
        H VRPID++EF++ DG L G  NIHTR CTC +FD +E+ CSH IAAC  +N+  + LCS  Y +E+VLAAYAEP+   GH S WK S  F++ E LPPK
Subjt:  HVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEWKTSEHFVDFEVLPPK

Query:  RVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWGFVYKKECRTVF
        RVPR+G+ +T R PS  E RQVH+C+RCG +G      KK C   F
Subjt:  RVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWGFVYKKECRTVF

TrEMBL top hitse value%identityAlignment
A0A6J1D127 uncharacterized protein LOC1110166257.0e-3756.06Show/hide
Query:  HVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEWKTSEHFVDFEVLPPK
        H VRPIDR+EF+V DG     VN++++TCTC++FD FE+ CSHAIA  +FRN+    LCS  Y++E ++  YAEPVYPLG   +W   + +V   + PPK
Subjt:  HVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEWKTSEHFVDFEVLPPK

Query:  RVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG
         VP VG+ QT RIPS GEVRQVHKC RCGN G
Subjt:  RVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG

A0A6J1D4G8 uncharacterized protein LOC1110168895.9e-3650.97Show/hide
Query:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNV-PYLDLCSPCYRVEAVLAAYAEPVY
        +Y E +L  Y D          HVV  ID++  QV DG+L G V+ ++RTC+CREFD F++ CSHAIA  + RN+ PY+ LC   Y   + + AYAEP++
Subjt:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNV-PYLDLCSPCYRVEAVLAAYAEPVY

Query:  PLGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG
        P+GHVS WK+S  FVD  V  P  VPRVG+R+T+RIPSTGEVR+  KC RCG  G
Subjt:  PLGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG

A0A6J1DJT1 uncharacterized protein LOC1110207151.0e-3550.33Show/hide
Query:  YGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPL
        Y E +L  Y+D          HVV  ID++  QV DG+L G V+ ++RTC CREFD F++ CSHAIA  + RN+    LC   Y   + + AYAEP++P+
Subjt:  YGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPL

Query:  GHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG
        GHVS W +S  FVD  V  P  VPRVG+R+T+RIPSTGEVRQ  KC RCG  G
Subjt:  GHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRG

A0A6J1DK35 uncharacterized protein LOC1110218335.9e-3649.04Show/hide
Query:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP
        +Y E     Y+D          HVV  ID++ FQV DG+  G V+++  TC+CREFD F++ CSH IAA + RN+    LC   Y   + + AYAEP++P
Subjt:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP

Query:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG
        +GHVS W +S  FV+  V PPK VPRVG+R T RIPSTGEVRQ  KC RC   G WG
Subjt:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG

A0A6J1DYC4 uncharacterized protein LOC1110256783.5e-3649.04Show/hide
Query:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP
        +Y E     Y+D          HVV  ID++ FQV DG+L G V+++   C+CREFD F++ CSHAIAA   RN+    LC   Y   + + AYAEP++P
Subjt:  EYGEEELGTYTDGTHENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYP

Query:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG
        +GH+S W +S  FV+  V PPK VPRVG+R+T+RIPSTGEVRQ  KC RC   G WG
Subjt:  LGHVSEWKTSEHFVDFEVLPPKRVPRVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase7.0e-0533.33Show/hide
Query:  GCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEW
        G V ++  TCTC EF   +  C HA+A C    +  L     CY VE     Y+    P+  +S W
Subjt:  GCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEW

AT1G64260.1 MuDR family transposase1.1e-0528.74Show/hide
Query:  HVVRPIDRYEFQVDDG--HLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEW
        +V+  ++R  F+V +        V ++  TCTCR+F  ++  C HA+A      +  L     CY VE     YA    P+  V+ W
Subjt:  HVVRPIDRYEFQVDDG--HLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCGTGTTTGGGTATGTTTTGGTGGTGTGGGGAAGAAGAGTGATAAGGAGTACGATGGTGGAGAGGTGAGGGGCTTAGACGTGGATGTTGAAATTTCTTATAACGA
GTTCTTAGGCCGGGTGTATGAATTGAGTAGTATAAATTCGAATGATAAAGAGATTGTATTGAGGTGTCTACTTCAACTGAGGTCTAAAGCTCCCGCTTTTGTGATTAGGA
ACAATGTAGACCTACATAAGTATGGAGACGATGTTAACCCGGATAGTGATTTTCATGATTGGGGAGAATACGGAGAAGAGGAGCTGGGCACATATACAGATGGAACACAT
GAGAATGGGGAGGAAGATTTGCACGTGGTTCGACCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTTGTGTCAACATCCACACGAGGACGTGTAC
TTGTCGTGAATTCGACTGCTTCGAACTTTCGTGCTCCCACGCAATCGCAGCCTGCATCTTCCGGAACGTGCCGTACTTGGATCTCTGTTCTCCATGCTACCGTGTTGAAG
CAGTGCTAGCTGCTTATGCAGAACCCGTATATCCACTAGGACATGTGTCGGAGTGGAAAACATCCGAACATTTTGTAGATTTCGAAGTCTTGCCTCCAAAGAGGGTTCCA
AGAGTGGGTCAACGACAAACATTGAGGATACCATCCACGGGAGAGGTTAGACAAGTTCACAAATGTACTCGATGTGGAAACAGAGGATTGTGGGGTTTTGTATACAAGAA
AGAATGTCGCACTGTTTTTTTCCCAGTCATTTCCCAGCCGAAACGCTTGACCGAGAACCCCAAACGAGCCTCAGTTTATTTTGAGCAAACGTCTCTAGTTTTTCTCGGTT
GTTTCCCGATCGAAACGATGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCGTGTTTGGGTATGTTTTGGTGGTGTGGGGAAGAAGAGTGATAAGGAGTACGATGGTGGAGAGGTGAGGGGCTTAGACGTGGATGTTGAAATTTCTTATAACGA
GTTCTTAGGCCGGGTGTATGAATTGAGTAGTATAAATTCGAATGATAAAGAGATTGTATTGAGGTGTCTACTTCAACTGAGGTCTAAAGCTCCCGCTTTTGTGATTAGGA
ACAATGTAGACCTACATAAGTATGGAGACGATGTTAACCCGGATAGTGATTTTCATGATTGGGGAGAATACGGAGAAGAGGAGCTGGGCACATATACAGATGGAACACAT
GAGAATGGGGAGGAAGATTTGCACGTGGTTCGACCAATTGACCGGTACGAATTCCAAGTCGACGATGGACACTTGGGTGGTTGTGTCAACATCCACACGAGGACGTGTAC
TTGTCGTGAATTCGACTGCTTCGAACTTTCGTGCTCCCACGCAATCGCAGCCTGCATCTTCCGGAACGTGCCGTACTTGGATCTCTGTTCTCCATGCTACCGTGTTGAAG
CAGTGCTAGCTGCTTATGCAGAACCCGTATATCCACTAGGACATGTGTCGGAGTGGAAAACATCCGAACATTTTGTAGATTTCGAAGTCTTGCCTCCAAAGAGGGTTCCA
AGAGTGGGTCAACGACAAACATTGAGGATACCATCCACGGGAGAGGTTAGACAAGTTCACAAATGTACTCGATGTGGAAACAGAGGATTGTGGGGTTTTGTATACAAGAA
AGAATGTCGCACTGTTTTTTTCCCAGTCATTTCCCAGCCGAAACGCTTGACCGAGAACCCCAAACGAGCCTCAGTTTATTTTGAGCAAACGTCTCTAGTTTTTCTCGGTT
GTTTCCCGATCGAAACGATGGACTGA
Protein sequenceShow/hide protein sequence
MTRVWVCFGGVGKKSDKEYDGGEVRGLDVDVEISYNEFLGRVYELSSINSNDKEIVLRCLLQLRSKAPAFVIRNNVDLHKYGDDVNPDSDFHDWGEYGEEELGTYTDGTH
ENGEEDLHVVRPIDRYEFQVDDGHLGGCVNIHTRTCTCREFDCFELSCSHAIAACIFRNVPYLDLCSPCYRVEAVLAAYAEPVYPLGHVSEWKTSEHFVDFEVLPPKRVP
RVGQRQTLRIPSTGEVRQVHKCTRCGNRGLWGFVYKKECRTVFFPVISQPKRLTENPKRASVYFEQTSLVFLGCFPIETMD