; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015412 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015412
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRhodanese domain-containing protein
Genome locationscaffold10:15352696..15357268
RNA-Seq ExpressionSpg015412
SyntenySpg015412
Gene Ontology termsNA
InterPro domainsIPR001763 - Rhodanese-like domain
IPR020936 - tRNA uridine(34) hydroxylase
IPR022111 - Rhodanase, C-terminal
IPR036873 - Rhodanese-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136802.1 rhodanese-like domain-containing protein 8, chloroplastic isoform X1 [Cucumis sativus]1.2e-6991.97Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGS+QWVGNLFVFDSRLSLPPSAYNPEAESC T QFS NNAFARCYIC+SQVSQLRHRNCANLDCNLLFLCCKECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTSSPRLRPVL G QRYQKWHIYRDF+++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

XP_008443390.1 PREDICTED: rhodanese-like domain-containing protein 8, chloroplastic [Cucumis melo]1.2e-6991.24Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGS+QWVGNLFVFDSRLSLPPSAYNPE ESC T QFSGNNAFARCYIC SQVSQLRHRNCANLDC+LLFLCCKECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTSSPRLRPVL G QRYQKWHIYRDF+++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

XP_011652230.1 rhodanese-like domain-containing protein 8, chloroplastic isoform X3 [Cucumis sativus]1.2e-6991.97Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGS+QWVGNLFVFDSRLSLPPSAYNPEAESC T QFS NNAFARCYIC+SQVSQLRHRNCANLDCNLLFLCCKECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTSSPRLRPVL G QRYQKWHIYRDF+++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

XP_038903814.1 rhodanese-like domain-containing protein 8, chloroplastic isoform X1 [Benincasa hispida]2.5e-7294.16Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRT QFS NNAFARCYICTSQVSQLRHRNCANLDCNLLFLCC+ECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTS+PRLRPVLPG QRYQKWHIYRDFR++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

XP_038903815.1 rhodanese-like domain-containing protein 8, chloroplastic isoform X2 [Benincasa hispida]2.5e-7294.16Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRT QFS NNAFARCYICTSQVSQLRHRNCANLDCNLLFLCC+ECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTS+PRLRPVLPG QRYQKWHIYRDFR++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

TrEMBL top hitse value%identityAlignment
A0A0A0LHQ3 Rhodanese domain-containing protein5.7e-7091.97Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGS+QWVGNLFVFDSRLSLPPSAYNPEAESC T QFS NNAFARCYIC+SQVSQLRHRNCANLDCNLLFLCCKECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTSSPRLRPVL G QRYQKWHIYRDF+++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

A0A1S3B7Y6 rhodanese-like domain-containing protein 8, chloroplastic5.7e-7091.24Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGS+QWVGNLFVFDSRLSLPPSAYNPE ESC T QFSGNNAFARCYIC SQVSQLRHRNCANLDC+LLFLCCKECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTSSPRLRPVL G QRYQKWHIYRDF+++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

A0A5A7UJZ5 Rhodanese-like domain-containing protein 85.7e-7091.24Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVSNYLKDEGS+QWVGNLFVFDSRLSLPPSAYNPE ESC T QFSGNNAFARCYIC SQVSQLRHRNCANLDC+LLFLCCKECV EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECTSSPRLRPVL G QRYQKWHIYRDF+++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

A0A6J1CT82 rhodanese-like domain-containing protein 8, chloroplastic3.1e-6889.78Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGVS+YLK+EGSEQWVGNLFVFDSRLSL PSAYNP+ ES RTTQ SGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCK+CVKEL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCCSECT+SPRLRPVL  LQRYQKWH+YRDFR++Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

A0A6J1EZW9 rhodanese-like domain-containing protein 8, chloroplastic2.8e-6991.24Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        RERGFQNLYTLKGGV+NYLKDEG EQWVGNLFVFDSRLSLPPSAYNPE ES RT QFSGNNAFARCYICTS+VSQLRHRNCANLDCNLLFLCCKECV+EL
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ
        RGCCC+ECTSSPRLRPVL   QRYQKWHIYRDFRR+Q
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ

SwissProt top hitse value%identityAlignment
B0B8K2 tRNA uridine(34) hydroxylase2.2e-1838.6Show/hide
Query:  ERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKELR
        E+GF+ +Y L GGV  Y    G+ +W G LFVFD R+++P    +P             +  ARC +C +      + NCAN DCN LF+CC+ C+   +
Subjt:  ERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKELR

Query:  GCCCSECTSSPRLR
        GCC  EC+ +PR+R
Subjt:  GCCCSECTSSPRLR

F4I933 Rhodanese-like domain-containing protein 8, chloroplastic7.2e-5465.31Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEA-----------ESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLL
        R+RGF+NLYTLKGGVS+YLK+EG+ +WVGNLFVFDSRLSLPP+AYN              E+ RT Q   + +FARCY+C SQV +LRHRNCANLDCN L
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEA-----------ESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLL

Query:  FLCCKECVKELRGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ
        FLCC ECV +L+GCCCS+C S+PRLRPVL G++RY+KWH+YRD   Q
Subjt:  FLCCKECVKELRGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ

Q5L7A0 tRNA uridine(34) hydroxylase5.7e-1936.92Show/hide
Query:  ERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKELR
        E+GF+ +Y L GGV  Y +  G+ +W G LFVFD RL++P    + +               A C  C +      + NCAN DCN LF+CCKEC+   +
Subjt:  ERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKELR

Query:  GCCCSECTSSPRLRPVLP--GLQRYQKWHI
        GCC  EC+ +PR+R   P  G + +++ H+
Subjt:  GCCCSECTSSPRLRPVLP--GLQRYQKWHI

Q6ME97 tRNA uridine(34) hydroxylase5.5e-2237.5Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL
        ++ GF+ +Y L+GG+ NY   +GSE W+G LFVFD RL++P S                      C+ C  Q S   + NCAN+DCN L+LCC+ CV++ 
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKEL

Query:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ
         GCCC++C ++PR+RP       Y    +++ FR++
Subjt:  RGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ

Q9Z7H1 tRNA uridine(34) hydroxylase8.8e-2042.11Show/hide
Query:  ERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKELR
        E+GF+ +Y L GGV  Y +  G+ +W+G LFVFD RL++P    +P+               A C  C  Q     + NCAN DCN LFLCC EC+ + +
Subjt:  ERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLLFLCCKECVKELR

Query:  GCCCSECTSSPRLR
        GCC  EC+ SPR+R
Subjt:  GCCCSECTSSPRLR

Arabidopsis top hitse value%identityAlignment
AT1G17850.1 Rhodanese/Cell cycle control phosphatase superfamily protein5.1e-5565.31Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEA-----------ESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLL
        R+RGF+NLYTLKGGVS+YLK+EG+ +WVGNLFVFDSRLSLPP+AYN              E+ RT Q   + +FARCY+C SQV +LRHRNCANLDCN L
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEA-----------ESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLL

Query:  FLCCKECVKELRGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ
        FLCC ECV +L+GCCCS+C S+PRLRPVL G++RY+KWH+YRD   Q
Subjt:  FLCCKECVKELRGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ

AT1G17850.2 Rhodanese/Cell cycle control phosphatase superfamily protein5.1e-5565.31Show/hide
Query:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEA-----------ESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLL
        R+RGF+NLYTLKGGVS+YLK+EG+ +WVGNLFVFDSRLSLPP+AYN              E+ RT Q   + +FARCY+C SQV +LRHRNCANLDCN L
Subjt:  RERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEA-----------ESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDCNLL

Query:  FLCCKECVKELRGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ
        FLCC ECV +L+GCCCS+C S+PRLRPVL G++RY+KWH+YRD   Q
Subjt:  FLCCKECVKELRGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGATGGAAAGAGAACAAAAACGAAAGAAGGAAGAGGAGGAAGCAGTGAAGAAAAGAGAGCACAAGGAAGAAATGCGGATGGAAAGAGAACAAAAACGAAAGAAGGA
AGAGGAGCCGACGGTCACATGGTCAGGGATGAAGAGGTGGTGGAAGCTGCGACTGGAGGATGGTGAACGGACGAAAAGGGAGGGAGGTAGTCACGAGAGGGAGACTCATT
GCTGGCAGCGAAGACGAGTGTGGTTGGAGACGAAGACATGGTTGAAGCAGCGATTGGAGGATGGAGAACGTATGGAGATGGAAGGAGGCAGTCATCAAAGAGAAATGGCA
ATATCAAAAGCTAACCCTAGTCAAGTGGGCCAGATATTCGTGGATATAATTATTCCTTTCTATCATTGTGGCAGGGAAAGAGGGTTTCAAAACCTGTACACCTTGAAAGG
AGGAGTTTCTAATTATCTAAAAGATGAAGGTAGTGAGCAATGGGTTGGAAATTTATTTGTGTTCGACTCACGACTCTCACTGCCTCCATCTGCCTACAACCCCGAAGCTG
AATCATGCAGAACCACCCAATTTTCTGGGAATAATGCTTTTGCCAGATGCTATATATGTACTTCCCAGGTTTCTCAATTAAGGCACCGTAATTGTGCGAATCTCGATTGC
AATCTACTATTCCTGTGCTGTAAAGAGTGTGTGAAGGAGTTGAGAGGATGCTGCTGTTCAGAATGCACAAGTTCACCTCGTCTTAGACCTGTTTTACCAGGGCTTCAAAG
GTATCAGAAATGGCACATATATCGTGATTTTCGACGACAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGGATGGAAAGAGAACAAAAACGAAAGAAGGAAGAGGAGGAAGCAGTGAAGAAAAGAGAGCACAAGGAAGAAATGCGGATGGAAAGAGAACAAAAACGAAAGAAGGA
AGAGGAGCCGACGGTCACATGGTCAGGGATGAAGAGGTGGTGGAAGCTGCGACTGGAGGATGGTGAACGGACGAAAAGGGAGGGAGGTAGTCACGAGAGGGAGACTCATT
GCTGGCAGCGAAGACGAGTGTGGTTGGAGACGAAGACATGGTTGAAGCAGCGATTGGAGGATGGAGAACGTATGGAGATGGAAGGAGGCAGTCATCAAAGAGAAATGGCA
ATATCAAAAGCTAACCCTAGTCAAGTGGGCCAGATATTCGTGGATATAATTATTCCTTTCTATCATTGTGGCAGGGAAAGAGGGTTTCAAAACCTGTACACCTTGAAAGG
AGGAGTTTCTAATTATCTAAAAGATGAAGGTAGTGAGCAATGGGTTGGAAATTTATTTGTGTTCGACTCACGACTCTCACTGCCTCCATCTGCCTACAACCCCGAAGCTG
AATCATGCAGAACCACCCAATTTTCTGGGAATAATGCTTTTGCCAGATGCTATATATGTACTTCCCAGGTTTCTCAATTAAGGCACCGTAATTGTGCGAATCTCGATTGC
AATCTACTATTCCTGTGCTGTAAAGAGTGTGTGAAGGAGTTGAGAGGATGCTGCTGTTCAGAATGCACAAGTTCACCTCGTCTTAGACCTGTTTTACCAGGGCTTCAAAG
GTATCAGAAATGGCACATATATCGTGATTTTCGACGACAACAATGA
Protein sequenceShow/hide protein sequence
MRMEREQKRKKEEEEAVKKREHKEEMRMEREQKRKKEEEPTVTWSGMKRWWKLRLEDGERTKREGGSHERETHCWQRRRVWLETKTWLKQRLEDGERMEMEGGSHQREMA
ISKANPSQVGQIFVDIIIPFYHCGRERGFQNLYTLKGGVSNYLKDEGSEQWVGNLFVFDSRLSLPPSAYNPEAESCRTTQFSGNNAFARCYICTSQVSQLRHRNCANLDC
NLLFLCCKECVKELRGCCCSECTSSPRLRPVLPGLQRYQKWHIYRDFRRQQ