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Spg015482 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015482
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptioncullin-1
Genome locationscaffold10:14219247..14223909
RNA-Seq ExpressionSpg015482
SyntenySpg015482
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0031461 - cullin-RING ubiquitin ligase complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031625 - ubiquitin protein ligase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013630.1 Cullin-1 [Cucurbita argyrosperma subsp. argyrosperma]8.1e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
XP_004143085.1 cullin-1 [Cucumis sativus]8.1e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
XP_022138464.1 cullin-1 [Momordica charantia]8.1e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
XP_023548186.1 cullin-1 [Cucurbita pepo subsp. pepo]8.1e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
XP_038874772.1 cullin-1 [Benincasa hispida]8.1e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
TrEMBL top hitse value%identityAlignment
A0A0A0KCC8 CULLIN_2 domain-containing protein3.9e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
A0A1S3C7X3 cullin-13.9e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
A0A6J1CA75 cullin-13.9e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
A0A6J1H5I5 cullin-13.9e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
A0A6J1KV58 cullin-13.9e-12100Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
SwissProt top hitse value%identityAlignment
Q5ZC88 Cullin-18.5e-1289.19Show/hide
Query:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        M   ERKTIDLEQGWEFMQKGITKLKNILEG PEPQF
Subjt:  MTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Q94AH6 Cullin-12.5e-0881.82Show/hide
Query:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        ERKTIDLEQGW++MQ GITKLK ILEGL EP F
Subjt:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
Arabidopsis top hitse value%identityAlignment
AT1G59790.1 Cullin family protein1.3e-0457.14Show/hide
Query:  MGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        M   + I  E+GW  +QKGITKL  ILEG PEP F
Subjt:  MGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
AT4G02570.1 cullin 11.8e-0981.82Show/hide
Query:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        ERKTIDLEQGW++MQ GITKLK ILEGL EP F
Subjt:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
AT4G02570.2 cullin 11.8e-0981.82Show/hide
Query:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        ERKTIDLEQGW++MQ GITKLK ILEGL EP F
Subjt:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
AT4G02570.3 cullin 11.8e-0981.82Show/hide
Query:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        ERKTIDLEQGW++MQ GITKLK ILEGL EP F
Subjt:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
AT4G02570.4 cullin 11.8e-0981.82Show/hide
Query:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF
        ERKTIDLEQGW++MQ GITKLK ILEGL EP F
Subjt:  ERKTIDLEQGWEFMQKGITKLKNILEGLPEPQF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACACTTCTCAGCTAATTCTAATTCCGGAATAACTCATATTCCTATAGGCATTAGCCACCGTTATTTGGTCAAGGATTTGTTAACAACACTTAACTCATCC
TCGAGTTCACGGTGTTACGAATCTTATGATCAGACCCTCCGAAGGGATGGTTGCTCCAGGACAACACGCAGGCGGATCATAAGACTCTCACGGTTCCGGGTTTGT
TCCCAGAAAGCCTTAATCAATTCGCCTTTTCTTGCCAATAAGAATGAAAACGCAGCAACCCTCTTGTGCGAACACCACCAATCGGCTACACAGGTATTTGGTAAA
GAGATTTGTGTCGACATGACAATGGGTGAGCGGAAGACTATTGACTTAGAGCAAGGATGGGAGTTTATGCAGAAGGGGATCACAAAGTTGAAGAATATTCTAGAG
GGTTTGCCTGAGCCTCAATTCATAGTGTTACCAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACACTTCTCAGCTAATTCTAATTCCGGAATAACTCATATTCCTATAGGCATTAGCCACCGTTATTTGGTCAAGGATTTGTTAACAACACTTAACTCATCC
TCGAGTTCACGGTGTTACGAATCTTATGATCAGACCCTCCGAAGGGATGGTTGCTCCAGGACAACACGCAGGCGGATCATAAGACTCTCACGGTTCCGGGTTTGT
TCCCAGAAAGCCTTAATCAATTCGCCTTTTCTTGCCAATAAGAATGAAAACGCAGCAACCCTCTTGTGCGAACACCACCAATCGGCTACACAGGTATTTGGTAAA
GAGATTTGTGTCGACATGACAATGGGTGAGCGGAAGACTATTGACTTAGAGCAAGGATGGGAGTTTATGCAGAAGGGGATCACAAAGTTGAAGAATATTCTAGAG
GGTTTGCCTGAGCCTCAATTCATAGTGTTACCAGGATAA
Protein sequenceShow/hide protein sequence
MRHFSANSNSGITHIPIGISHRYLVKDLLTTLNSSSSSRCYESYDQTLRRDGCSRTTRRRIIRLSRFRVCSQKALINSPFLANKNENAATLLCEHHQSATQVFGK
EICVDMTMGERKTIDLEQGWEFMQKGITKLKNILEGLPEPQFIVLPG