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Spg015484 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015484
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionamino acid transporter AVT1I isoform X2
Genome locationscaffold10:13053596..13053835
RNA-Seq ExpressionSpg015484
SyntenySpg015484
Gene Ontology termsGO:0006865 - amino acid transport (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015293 - symporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588368.1 Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1478.18Show/hide
Query:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG
        MGESV  TL GHL EPLL GDKQNDVELQ T A  G GAT+F+KTCFNGLNALSG
Subjt:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG

XP_022933849.1 amino acid transporter AVT1I isoform X2 [Cucurbita moschata]2.7e-1478.18Show/hide
Query:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG
        MGESV  TL GHL EPLL GDKQNDVELQ T A  G GAT+F+KTCFNGLNALSG
Subjt:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG

XP_023006249.1 amino acid transporter AVT1I-like isoform X2 [Cucurbita maxima]5.0e-1376.79Show/hide
Query:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQT-TAVNGGGATSFVKTCFNGLNALSG
        MGESV  TL GHL EPLL GDKQNDVELQ T  A  G GAT+F+KTCFNGLNALSG
Subjt:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQT-TAVNGGGATSFVKTCFNGLNALSG

XP_023529536.1 amino acid transporter AVT1I-like isoform X1 [Cucurbita pepo subsp. pepo]1.7e-1377.19Show/hide
Query:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTT--AVNGGGATSFVKTCFNGLNALSG
        MGESV  TL GHL EPLL GDKQNDVELQ TT  A  G GAT+F+KTCFNGLNALSG
Subjt:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTT--AVNGGGATSFVKTCFNGLNALSG

XP_038905111.1 amino acid transporter AVT1J-like isoform X2 [Benincasa hispida]1.1e-1277.78Show/hide
Query:  ESVHPTLSGHLDEPLL-IGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG
        +SVH  LSGHL  PLL  GDKQNDVE Q+TTA NGGGATSF+K CFNGLNALSG
Subjt:  ESVHPTLSGHLDEPLL-IGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG

TrEMBL top hitse value%identityAlignment
A0A1S3B7X7 vacuolar amino acid transporter 1-like isoform X25.0e-1178.18Show/hide
Query:  ESVHPTLSGHLDEPLLIGDKQN-DVELQQTTA-VNGGGATSFVKTCFNGLNALSG
        E VH TLSGHL  PLL G KQN DVE Q TT  VN GGATSFVKTCFNGLNALSG
Subjt:  ESVHPTLSGHLDEPLLIGDKQN-DVELQQTTA-VNGGGATSFVKTCFNGLNALSG

A0A6J1E227 amino acid transporter AVT1I-like3.7e-0675Show/hide
Query:  LDEPLLIGDKQN-DVELQQTTAVNGGGATSFVKTCFNGLNALSG
        +D PLLI +KQN DVELQQ++A   G ATSFVKTCFNGLNALSG
Subjt:  LDEPLLIGDKQN-DVELQQTTAVNGGGATSFVKTCFNGLNALSG

A0A6J1F0W3 amino acid transporter AVT1I isoform X21.3e-1478.18Show/hide
Query:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG
        MGESV  TL GHL EPLL GDKQNDVELQ T A  G GAT+F+KTCFNGLNALSG
Subjt:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSG

A0A6J1L1M9 amino acid transporter AVT1I-like isoform X22.4e-1376.79Show/hide
Query:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQT-TAVNGGGATSFVKTCFNGLNALSG
        MGESV  TL GHL EPLL GDKQNDVELQ T  A  G GAT+F+KTCFNGLNALSG
Subjt:  MGESVHPTLSGHLDEPLLIGDKQNDVELQQT-TAVNGGGATSFVKTCFNGLNALSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAGTCCGTCCATCCCACATTATCAGGCCACCTCGATGAGCCGCTTCTAATCGGAGACAAGCAAAACGACGTCGAACTGCAACAAACCACCGCCGTCAAT
GGCGGTGGCGCCACCTCCTTCGTCAAAACCTGCTTCAACGGACTCAACGCTCTTTCAGGTTCTAATTTCTCTCTTTTTTCTTTGATTTTGCCATTTCCATTTTCG
CCGCCCCCTTCTGCTTTTCTTTTCGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAGTCCGTCCATCCCACATTATCAGGCCACCTCGATGAGCCGCTTCTAATCGGAGACAAGCAAAACGACGTCGAACTGCAACAAACCACCGCCGTCAAT
GGCGGTGGCGCCACCTCCTTCGTCAAAACCTGCTTCAACGGACTCAACGCTCTTTCAGGTTCTAATTTCTCTCTTTTTTCTTTGATTTTGCCATTTCCATTTTCG
CCGCCCCCTTCTGCTTTTCTTTTCGTCTAG
Protein sequenceShow/hide protein sequence
MGESVHPTLSGHLDEPLLIGDKQNDVELQQTTAVNGGGATSFVKTCFNGLNALSGSNFSLFSLILPFPFSPPPSAFLFV