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Spg015510 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015510
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRAB6-interacting golgin
Genome locationscaffold10:16317908..16322957
RNA-Seq ExpressionSpg015510
SyntenySpg015510
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139478.1 uncharacterized protein LOC101203874 [Cucumis sativus]1.6e-1875Show/hide
Query:  MKRMKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        M+R+KNSGMISS+VN   IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE   G
Subjt:  MKRMKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

XP_008461743.1 PREDICTED: probable DNA double-strand break repair Rad50 ATPase [Cucumis melo]9.4e-1975.95Show/hide
Query:  MKRMKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        M+R+KNSGMISS+V N IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE   G
Subjt:  MKRMKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

XP_022142637.1 uncharacterized protein LOC111012700 [Momordica charantia]3.8e-2083.78Show/hide
Query:  MKRMKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        M+R++NSGMI SHVNAIGS ++EDQ EELSRSAFALFRAKEE+IERKKMEMRDKVEA LGRAEEA KRL EIRE
Subjt:  MKRMKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

XP_022970344.1 uncharacterized protein LOC111469338 [Cucurbita maxima]1.2e-1379.37Show/hide
Query:  AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        AIGS  REDQ EELSRSA ALFRAKEE+IERKKMEMR+KVE  LGRAEEA KRL EIRE   G
Subjt:  AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

XP_038893849.1 uncharacterized protein LOC120082661 [Benincasa hispida]3.2e-1977.22Show/hide
Query:  MKRMKNSG-MISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        M+R+KNSG MISS+VNAIGS V+EDQ EE+SRSA A+FRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE   G
Subjt:  MKRMKNSG-MISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

TrEMBL top hitse value%identityAlignment
A0A0A0LY59 RAB6-interacting golgin7.8e-1975Show/hide
Query:  MKRMKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        M+R+KNSGMISS+VN   IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE   G
Subjt:  MKRMKNSGMISSHVN--AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

A0A1S3CFV6 RAB6-interacting golgin4.6e-1975.95Show/hide
Query:  MKRMKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        M+R+KNSGMISS+V N IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE   G
Subjt:  MKRMKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

A0A5D3CH78 RAB6-interacting golgin4.6e-1975.95Show/hide
Query:  MKRMKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        M+R+KNSGMISS+V N IGS ++EDQ EE+SRSA ALFRAKEE+IERKKMEMR+KVEA LGRAEEA KRL EIRE   G
Subjt:  MKRMKNSGMISSHV-NAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

A0A6J1CNF1 RAB6-interacting golgin1.8e-2083.78Show/hide
Query:  MKRMKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        M+R++NSGMI SHVNAIGS ++EDQ EELSRSAFALFRAKEE+IERKKMEMRDKVEA LGRAEEA KRL EIRE
Subjt:  MKRMKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

A0A6J1I589 RAB6-interacting golgin5.8e-1479.37Show/hide
Query:  AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        AIGS  REDQ EELSRSA ALFRAKEE+IERKKMEMR+KVE  LGRAEEA KRL EIRE   G
Subjt:  AIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27740.1 Family of unknown function (DUF662)1.1e-1255.41Show/hide
Query:  MKRMKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        ++R+K+SG IS +    GS + +++ EELS+SAFALF+AKE++IER+KME++D+V+  LG AEEA +RL EIRE
Subjt:  MKRMKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT2G36410.1 Family of unknown function (DUF662)2.7e-0850Show/hide
Query:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        SSH++      RED  EE++RSA + FRAKE++IE+++ME+R++++A LGR E+  KRL+ IRE
Subjt:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT2G36410.2 Family of unknown function (DUF662)2.7e-0850Show/hide
Query:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        SSH++      RED  EE++RSA + FRAKE++IE+++ME+R++++A LGR E+  KRL+ IRE
Subjt:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT2G36410.3 Family of unknown function (DUF662)2.7e-0850Show/hide
Query:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE
        SSH++      RED  EE++RSA + FRAKE++IE+++ME+R++++A LGR E+  KRL+ IRE
Subjt:  SSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRE

AT3G09980.1 Family of unknown function (DUF662)1.1e-0950.72Show/hide
Query:  ISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG
        +S  ++    + +ED  EE+SR+A + FRAKEE+IE+KKME+R++V+A LGR EE  KRL  IRE   G
Subjt:  ISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCTAGTGAGGGAGGATCAAGTCGAGGAGCTTTCGAGATCGGCATTCGCATTGTT
TCGAGCCAAGGAAGAGAAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCACCTTGGACGAGCTGAAGAAGCGATGAAGCGATTGACGGAGATTCGCG
AAAGTCATAGCGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACGTTTGGTCCCTATGAAATCAAGAAAGACGTTCTTGATATTTCAGAGAAAACAACGACGATGGCA
GCAACTCCTAGCGTCGAGACGCTGATGTCACAGCGTCACGTAATATGCTTGTTGCCGAAATTGCTTAGCGTCGGGACGTTGCCCCATTTCCAGCTTACTCTCCACAGCTG
GCTAGCGTCAAAACGCTCAAGGCTAGCATCTCAACGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAATGAAGAACTCGGGCATGATAAGCAGCCATGTGAATGCGATTGGGAGTCTAGTGAGGGAGGATCAAGTCGAGGAGCTTTCGAGATCGGCATTCGCATTGTT
TCGAGCCAAGGAAGAGAAGATCGAGAGGAAGAAGATGGAGATGAGAGACAAGGTGGAGGCCCACCTTGGACGAGCTGAAGAAGCGATGAAGCGATTGACGGAGATTCGCG
AAAGTCATAGCGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACGTTTGGTCCCTATGAAATCAAGAAAGACGTTCTTGATATTTCAGAGAAAACAACGACGATGGCA
GCAACTCCTAGCGTCGAGACGCTGATGTCACAGCGTCACGTAATATGCTTGTTGCCGAAATTGCTTAGCGTCGGGACGTTGCCCCATTTCCAGCTTACTCTCCACAGCTG
GCTAGCGTCAAAACGCTCAAGGCTAGCATCTCAACGCTAG
Protein sequenceShow/hide protein sequence
MKRMKNSGMISSHVNAIGSLVREDQVEELSRSAFALFRAKEEKIERKKMEMRDKVEAHLGRAEEAMKRLTEIRESHSGEDQLVVSQLLTFGPYEIKKDVLDISEKTTTMA
ATPSVETLMSQRHVICLLPKLLSVGTLPHFQLTLHSWLASKRSRLASQR