CuGenDBv2

Gene ID	Spg015555
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	DUF4216 domain-containing protein
Genome location	scaffold10:14980496..14983252
RNA-Seq Expression	Spg015555
Synteny	Spg015555
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

RVW51304.1 hypothetical protein CK203_075478 [Vitis vinifera]

2.6e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

RVW55021.1 hypothetical protein CK203_117381 [Vitis vinifera]

2.6e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

RVW66346.1 hypothetical protein CK203_065230 [Vitis vinifera]

2.6e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

RVW74856.1 hypothetical protein CK203_053854 [Vitis vinifera]

2.6e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

RVX04705.1 hypothetical protein CK203_024978 [Vitis vinifera]

2.6e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

TrEMBL top hits

e value

%identity

Alignment

A0A438D9E3 Uncharacterized protein

1.3e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

A0A438EUD1 Uncharacterized protein

1.3e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

A0A438F4W4 Uncharacterized protein

1.3e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

A0A438G2C1 Uncharacterized protein

1.3e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

A0A438J0W7 Uncharacterized protein

1.3e-23

49.55

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Query:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD
        S++EL KAHWY++ NC  + PY   EH  EL   S  N+ +  E +FP W  +++++     S E   ELY+L+CGPDNR+ +Y GCIVNGVRF  KDRD
Subjt:  SRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPMWFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRD

Query:  DCCTTQNSGVC
        D   TQNSG+C
Subjt:  DCCTTQNSGVC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCAGCGTCGAAACGCCCAAAGAGCAGCGTCGAAACGCTGAACAAAGGAGGGAGGGAGGAGGGACCTCCCTCCTCCTCGGTTTCCCACCGAAAATCGAGGAGATCCCC
GTCCAGATCTGGGCGGAAAGGGAGGAGGGACCTCCCTCCTCCTCGGTATGTTCTAACCAACTGTGACAAAGTATCCCGTGACGAATTACAAAAAGCTCATTGGTATGTTC
TAACCAACTGTGAAGCAGTAGATCCATATAGAAGTAGTGAACATGAGGTTGAGCTAAGGAATAAGAGTCAAGATAATATTCCTAGAATACATGAAGCACAATTTCCAATG
TGGTTTAAAAATAAAATTCAATCCCAAGTTCAGTCGACGTCAAATGAAGTTGAGCGAGAGTTATATGCACTATCATGTGGTCCTGATAATCGAATTAGTTCGTATAGTGG
GTGTATTGTTAATGGTGTTCGATTTAGCTGCAAGGATCGGGATGATTGTTGCACAACTCAAAATAGTGGAGTTTGTAATGAACCATTCATTCTTGCTTCCCAAGCACAAC
AGGGAAAAATGGTAGCGTTAACCCAAGAGCAAGCCAGCTCGAGTACACCAATGGATGATGATGAAGTTATGGCTACTGTTCTCGAAAAAAGACCATCGTATGTTAAAGGG
ATGGGATATGGTCCACAGCCACCACAGAGTCAGAAGACAAATTATTCACAAGAGTATGTCCAATCATTAGAGACTCGCCTAGTAAGGACTGAAGAATGTTTGGAGAATCA
AGTACGAGAAATGAAGGAATCAGACTCTCGATTGAAGGAACAAATGAAGGAACAAATGGAAGAACTATTGGCCATGCAGCGTCAAGAGTATGAAAGAAAATTTAGCCAAA
TGAATGAAATCTTAGAAAGATTCACTGGAGCAAATCCATCAGCTAGAAAGGTAAAGTTTTCGTACCTTCTTCATGTTCATACTACTTTCGTAACTTTGAGACTTTGA

mRNA sequence

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Protein sequence

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MSASKRPKSSVETLNKGGREEGPPSSSVSHRKSRRSPSRSGRKGRRDLPPPRYVLTNCDKVSRDELQKAHWYVLTNCEAVDPYRSSEHEVELRNKSQDNIPRIHEAQFPM
WFKNKIQSQVQSTSNEVERELYALSCGPDNRISSYSGCIVNGVRFSCKDRDDCCTTQNSGVCNEPFILASQAQQGKMVALTQEQASSSTPMDDDEVMATVLEKRPSYVKG
MGYGPQPPQSQKTNYSQEYVQSLETRLVRTEECLENQVREMKESDSRLKEQMKEQMEELLAMQRQEYERKFSQMNEILERFTGANPSARKVKFSYLLHVHTTFVTLRL

Spg015555 (gene) of Sponge gourd (cylindrica) v1 genome