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Spg015582 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015582
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMicrotubule-associated protein 65-2
Genome locationscaffold10:11503004..11504399
RNA-Seq ExpressionSpg015582
SyntenySpg015582
Gene Ontology termsGO:0000226 - microtubule cytoskeleton organization (biological process)
GO:0005874 - microtubule (cellular component)
GO:0008017 - microtubule binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK36206.1 unknown [Lotus japonicus]4.9e-0546.97Show/hide
Query:  DSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKIHSKPFIFI
        + +R D +PQ +HV L +VLQ+V V    +LW+QS +PLLQQLED  RRT++ L     SK    I
Subjt:  DSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKIHSKPFIFI

GER35818.1 microtubule-associated protein 65-2 [Striga asiatica]3.3e-0964.81Show/hide
Query:  MPKSVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGR
        MP ++ +++R D +PQ +HVLLPKVLQKV +RA  +LW+QS LPLLQQLEDQGR
Subjt:  MPKSVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGR

GFP99388.1 gibberellin-regulated protein 4 [Phtheirospermum japonicum]2.2e-0563.27Show/hide
Query:  DTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSL
        D V + + VLL +VLQ+V +R+P +LW+QSRL LLQQLEDQGRRT+M L
Subjt:  DTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSL

KAG5535083.1 hypothetical protein RHGRI_023012 [Rhododendron griersonianum]1.2e-0852.86Show/hide
Query:  MPKSVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKIHSKPFI
        MP ++L  VR D VPQ +HV LP++L ++ V AP +LW+QS +PLLQQLEDQGR  Q+ L+   HS P++
Subjt:  MPKSVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKIHSKPFI

KAG5536615.1 hypothetical protein RHGRI_024138 [Rhododendron griersonianum]2.4e-0452.46Show/hide
Query:  SVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKI
        ++L ++  +TV +TM VLL ++L KVLV + WLL +Q  +PLLQQLEDQ RR QM L+ +I
Subjt:  SVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKI

TrEMBL top hitse value%identityAlignment
A0A5A7PT29 Microtubule-associated protein 65-21.6e-0964.81Show/hide
Query:  MPKSVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGR
        MP ++ +++R D +PQ +HVLLPKVLQKV +RA  +LW+QS LPLLQQLEDQGR
Subjt:  MPKSVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGR

A0A6A4MJE0 Uncharacterized protein (Fragment)1.2e-0452.46Show/hide
Query:  SVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKI
        ++L ++  +TV +TM VLL ++L KVLV + WLL +Q  +PLLQQLEDQ RR QM L+ +I
Subjt:  SVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKI

I3S7G4 Uncharacterized protein2.4e-0546.97Show/hide
Query:  DSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKIHSKPFIFI
        + +R D +PQ +HV L +VLQ+V V    +LW+QS +PLLQQLED  RRT++ L     SK    I
Subjt:  DSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKIHSKPFIFI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTGAACCCATACGGACCAGGGAGCGTCAAGATCTACCAATGCCCAAATCGGTGCTCGACTCGGTGCGGGAAGACACAGTACCACAAACCATGCATGTTCTTCT
GCCAAAAGTGCTGCAGAAAGTGCTTGTGCGTGCCCCCTGGTTACTATGGAAACAAAGCCGTTTGCCCTTGCTACAACAACTGGAAGACCAAGGAAGGAGGACCCAAATGT
CCTTGAAAACAAAAATTCATTCAAAACCCTTCATTTTCATTTCTCTCTCTGTTTCTGTTTTTTCCCCTTTTGCATTTTCCTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTTGAACCCATACGGACCAGGGAGCGTCAAGATCTACCAATGCCCAAATCGGTGCTCGACTCGGTGCGGGAAGACACAGTACCACAAACCATGCATGTTCTTCT
GCCAAAAGTGCTGCAGAAAGTGCTTGTGCGTGCCCCCTGGTTACTATGGAAACAAAGCCGTTTGCCCTTGCTACAACAACTGGAAGACCAAGGAAGGAGGACCCAAATGT
CCTTGAAAACAAAAATTCATTCAAAACCCTTCATTTTCATTTCTCTCTCTGTTTCTGTTTTTTCCCCTTTTGCATTTTCCTGCTAA
Protein sequenceShow/hide protein sequence
MGFEPIRTRERQDLPMPKSVLDSVREDTVPQTMHVLLPKVLQKVLVRAPWLLWKQSRLPLLQQLEDQGRRTQMSLKTKIHSKPFIFISLSVSVFSPFAFSC