; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015594 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015594
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTy3-gypsy retrotransposon protein
Genome locationscaffold10:15922883..15940526
RNA-Seq ExpressionSpg015594
SyntenySpg015594
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031665.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]4.5e-0743.68Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        +KES  +R+ +R  K+Q+ K KKKTR LK V EE +DF  P + +TLA++FP  FL D Q E    V CH ++V E++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

KAA0032810.1 uncharacterized protein E6C27_scaffold708G00640 [Cucumis melo var. makuwa]4.5e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKESR +R+ +R  K+Q+ K KKKTR LK V EE +DF    + +TLA++FP  FL D Q E    + CH ++  E++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

KAA0046265.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]3.5e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKES  +R+ +R+ K+Q+ K KKKTR  K V EE +DF  P + +T+A+ FP  FL D Q E  E +TCH ++  E++  P  +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

KAA0048448.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.9e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKES  +R+ +R  K+Q KK KKKTR LK V EE +DF  P + +TLA++FP  FL + Q E    V CH ++  +++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

TYK28245.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]5.9e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKES  +R+ +R  K+Q KK KKKTR LK V EE +DF  P + +TLA++FP  FL + Q E    V CH ++  +++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

TrEMBL top hitse value%identityAlignment
A0A5A7SRA6 Ty3-gypsy retrotransposon protein2.2e-0743.68Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        +KES  +R+ +R  K+Q+ K KKKTR LK V EE +DF  P + +TLA++FP  FL D Q E    V CH ++V E++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

A0A5A7TY01 Ty3-gypsy retrotransposon protein1.7e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKES  +R+ +R+ K+Q+ K KKKTR  K V EE +DF  P + +T+A+ FP  FL D Q E  E +TCH ++  E++  P  +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

A0A5A7TZS6 Ty3-gypsy retrotransposon protein2.9e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKES  +R+ +R  K+Q KK KKKTR LK V EE +DF  P + +TLA++FP  FL + Q E    V CH ++  +++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

A0A5D3DY41 Ty3-gypsy retrotransposon protein2.9e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKES  +R+ +R  K+Q KK KKKTR LK V EE +DF  P + +TLA++FP  FL + Q E    V CH ++  +++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

A0A5D3E3J4 Uncharacterized protein2.2e-0742.53Show/hide
Query:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK
        QKESR +R+ +R  K+Q+ K KKKTR LK V EE +DF    + +TLA++FP  FL D Q E    + CH ++  E++  P+ +L++
Subjt:  QKESRLFRDSKRKVKSQRKKGKKKTRMLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAACTCATTGCATAGGACTCTCTTACTCACATGTCTCTACATGGACGATTCAGGATCACATCGTTTGCACAAAATACAAAGTAGGTCGCATCCATAGTGTCCCAAG
AATAAGGAATTTTCTGTTTGAGGAATTTCGTGCTGTAAATTCGGTCTACACACCTTTAAGTCTTGGGGTCTTGAAGTCTTTAAGAGTCTTTGGTCTTCAAGGATTGCTCA
AGTCTTTTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGATCTTGAAGTCTTGAAGAGATTGCTGAAGTCTTCTAGTCTTGAAGGGTCTTCATTCTTCAAGAAG
TCTTGGGGTCTTGAAGTCTTGAAGAGTCTTTGGTCTTCAAGGATTGTCGCACACAGCTCGAGGAAAAAGCCATCTTCATTCCATCTCTTCATCTCCTTCACGATTCAGCC
ATCTCTTCATATTCTTCAAGATTCAGCCACCAAGCCCACGAATTTCCTTGATTTCTTGAGCTTCTCGTCGTCGGCCAGCCTACTTCCTTCGACGACGTTCTTCTCCGGCA
ATGGCAAGCAGCGGCGGCGTTTCACTGCAGTTCGACGGTGTCATCAACGACAGCAGCTGCAGGTGGGTTTCGGTGCTCTGATTCTCACGTTTTTCCTTCTTTTCCACGGG
TTTTTCTCTCGATTTTTCCTCTCAAACGTTAGCTGGTCTGCAGGCTCTGATTGGGGGTTTTTCAGAATAGAGATCAAGGAGGATCACACTCTTGTCGCTGTTGCAAGTAG
GATCTCAAAATTTATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACCCGTTGTTCGAATCTGTCACTGCAACATCTGAGCAGCCAAAAGACGCACTAAATC
CTCATGTGATGTCTGTCATGATGGCTGATGAACAGAAGGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAGACAAGG
ATGTTAAAGCCTGTTGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCGGAATACTTCCCAAGGAGCTTTCTCGATGATAGTCAAGGAGAGGC
ACTTGAAACTGTCACGTGTCACATTGTGGACGTGGGGGAAGATGATGATGCCCCAGTGATAACTCTCCAAAAGGGAGTTATTTGTGCCTTATCCTGTGTGAGTTTGGTGG
ATGAGCGATCCGCCAGGGGTAAGGTTAATTGCATGAGCCATCTGATAGAGCCACGTGTCACACAGGGAAGATCAAAGGGCTTAGCCGTTGGACAGCTCATTGTTATTTAC
CATGGGCGATTGGGATTCAGATTTTACCGTTTGATGGTTTTAATTATTCAGATTGCATGGAAAGTGAAAACAAAGAAAAAGAAAACGTCGGAGGAAAAAGAAGCCAAAAG
AAGGAGAAGGCAACAGAGGGCTGAGGATCAAGAAAGTGTACAGAAGGTGGTAGAAGATGTGGCTGCCACAGTGGCTGAAGACCCGAAGGAACCAGAGGGACAGAACACTG
AGTTGATTGACCCAGTAGTTGCAGATACGGAGGGAGTAGTCCGAACTGATACCCCATCACCACCATCAACGGATTATGAGAAAGAGAATGCAGAGAGAGAGGAACGGGAG
AAAAAGGAGGCTGAGGACAGAGAGAGAGAAGAAGCAGGAAAGAAAGCAGCGGAAGAAACTTTGACAAAGCATCAAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGA
TGAACCTATAGAAGAAGCAGAAGAAGGACCATTCATCCGCTTCATCAATGAACTTGCTCGAGCAAAATATCGGGAGATGCTAAAAAGGGATTTCTTATTCGAAAGAGGGT
TTGGTGACGATCTGCCACATTTCTTAAGGGCAGGGATCGCGAATCACAGCTGGAGTCATATCAGAGCTAAGTTGTGGCAAATTCTTAGAATTGAGTTAAAAGTGGTGATT
ATTTGTCCATGCCGGAAGAATTACTTTGCTGCAGCAGAGCTTGGTTTTGCCGAATGCTCAGGTTGGTTAGTATTGCTCGGGACGCGCAATAGTTCAAGTTTGGGGAATAA
ATTGCTGAGCGACTTGAGGGAGCGAAAGCTATGCTGGAGCAAAGCTGGGAGCAAAACTGGCACATCACAGTTCGTTAGCCAATTTAATGAACTGAATTCTGTTAAGCTAT
TCTCGGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAACTCATTGCATAGGACTCTCTTACTCACATGTCTCTACATGGACGATTCAGGATCACATCGTTTGCACAAAATACAAAGTAGGTCGCATCCATAGTGTCCCAAG
AATAAGGAATTTTCTGTTTGAGGAATTTCGTGCTGTAAATTCGGTCTACACACCTTTAAGTCTTGGGGTCTTGAAGTCTTTAAGAGTCTTTGGTCTTCAAGGATTGCTCA
AGTCTTTTAGTCTTGAAGGGTCTTCAGTCTTCAAGAAGTCTTGGGATCTTGAAGTCTTGAAGAGATTGCTGAAGTCTTCTAGTCTTGAAGGGTCTTCATTCTTCAAGAAG
TCTTGGGGTCTTGAAGTCTTGAAGAGTCTTTGGTCTTCAAGGATTGTCGCACACAGCTCGAGGAAAAAGCCATCTTCATTCCATCTCTTCATCTCCTTCACGATTCAGCC
ATCTCTTCATATTCTTCAAGATTCAGCCACCAAGCCCACGAATTTCCTTGATTTCTTGAGCTTCTCGTCGTCGGCCAGCCTACTTCCTTCGACGACGTTCTTCTCCGGCA
ATGGCAAGCAGCGGCGGCGTTTCACTGCAGTTCGACGGTGTCATCAACGACAGCAGCTGCAGGTGGGTTTCGGTGCTCTGATTCTCACGTTTTTCCTTCTTTTCCACGGG
TTTTTCTCTCGATTTTTCCTCTCAAACGTTAGCTGGTCTGCAGGCTCTGATTGGGGGTTTTTCAGAATAGAGATCAAGGAGGATCACACTCTTGTCGCTGTTGCAAGTAG
GATCTCAAAATTTATTGAAGAATCCTCTAAGGACAAGGTTGCAGTCAAAGACAACCCGTTGTTCGAATCTGTCACTGCAACATCTGAGCAGCCAAAAGACGCACTAAATC
CTCATGTGATGTCTGTCATGATGGCTGATGAACAGAAGGAGTCCCGCCTATTTCGAGATAGTAAAAGAAAAGTTAAGTCTCAAAGGAAGAAGGGAAAAAAGAAGACAAGG
ATGTTAAAGCCTGTTGTGGAGGAAAGTGAAGATTTCTTTTGCCCTCCACAACCCATAACTTTGGCGGAATACTTCCCAAGGAGCTTTCTCGATGATAGTCAAGGAGAGGC
ACTTGAAACTGTCACGTGTCACATTGTGGACGTGGGGGAAGATGATGATGCCCCAGTGATAACTCTCCAAAAGGGAGTTATTTGTGCCTTATCCTGTGTGAGTTTGGTGG
ATGAGCGATCCGCCAGGGGTAAGGTTAATTGCATGAGCCATCTGATAGAGCCACGTGTCACACAGGGAAGATCAAAGGGCTTAGCCGTTGGACAGCTCATTGTTATTTAC
CATGGGCGATTGGGATTCAGATTTTACCGTTTGATGGTTTTAATTATTCAGATTGCATGGAAAGTGAAAACAAAGAAAAAGAAAACGTCGGAGGAAAAAGAAGCCAAAAG
AAGGAGAAGGCAACAGAGGGCTGAGGATCAAGAAAGTGTACAGAAGGTGGTAGAAGATGTGGCTGCCACAGTGGCTGAAGACCCGAAGGAACCAGAGGGACAGAACACTG
AGTTGATTGACCCAGTAGTTGCAGATACGGAGGGAGTAGTCCGAACTGATACCCCATCACCACCATCAACGGATTATGAGAAAGAGAATGCAGAGAGAGAGGAACGGGAG
AAAAAGGAGGCTGAGGACAGAGAGAGAGAAGAAGCAGGAAAGAAAGCAGCGGAAGAAACTTTGACAAAGCATCAAGAAGACAGAGGCAAAGGAATTGCTGAAGCATCGGA
TGAACCTATAGAAGAAGCAGAAGAAGGACCATTCATCCGCTTCATCAATGAACTTGCTCGAGCAAAATATCGGGAGATGCTAAAAAGGGATTTCTTATTCGAAAGAGGGT
TTGGTGACGATCTGCCACATTTCTTAAGGGCAGGGATCGCGAATCACAGCTGGAGTCATATCAGAGCTAAGTTGTGGCAAATTCTTAGAATTGAGTTAAAAGTGGTGATT
ATTTGTCCATGCCGGAAGAATTACTTTGCTGCAGCAGAGCTTGGTTTTGCCGAATGCTCAGGTTGGTTAGTATTGCTCGGGACGCGCAATAGTTCAAGTTTGGGGAATAA
ATTGCTGAGCGACTTGAGGGAGCGAAAGCTATGCTGGAGCAAAGCTGGGAGCAAAACTGGCACATCACAGTTCGTTAGCCAATTTAATGAACTGAATTCTGTTAAGCTAT
TCTCGGGATAA
Protein sequenceShow/hide protein sequence
MQTHCIGLSYSHVSTWTIQDHIVCTKYKVGRIHSVPRIRNFLFEEFRAVNSVYTPLSLGVLKSLRVFGLQGLLKSFSLEGSSVFKKSWDLEVLKRLLKSSSLEGSSFFKK
SWGLEVLKSLWSSRIVAHSSRKKPSSFHLFISFTIQPSLHILQDSATKPTNFLDFLSFSSSASLLPSTTFFSGNGKQRRRFTAVRRCHQRQQLQVGFGALILTFFLLFHG
FFSRFFLSNVSWSAGSDWGFFRIEIKEDHTLVAVASRISKFIEESSKDKVAVKDNPLFESVTATSEQPKDALNPHVMSVMMADEQKESRLFRDSKRKVKSQRKKGKKKTR
MLKPVVEESEDFFCPPQPITLAEYFPRSFLDDSQGEALETVTCHIVDVGEDDDAPVITLQKGVICALSCVSLVDERSARGKVNCMSHLIEPRVTQGRSKGLAVGQLIVIY
HGRLGFRFYRLMVLIIQIAWKVKTKKKKTSEEKEAKRRRRQQRAEDQESVQKVVEDVAATVAEDPKEPEGQNTELIDPVVADTEGVVRTDTPSPPSTDYEKENAEREERE
KKEAEDREREEAGKKAAEETLTKHQEDRGKGIAEASDEPIEEAEEGPFIRFINELARAKYREMLKRDFLFERGFGDDLPHFLRAGIANHSWSHIRAKLWQILRIELKVVI
ICPCRKNYFAAAELGFAECSGWLVLLGTRNSSSLGNKLLSDLRERKLCWSKAGSKTGTSQFVSQFNELNSVKLFSG