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Spg015624 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015624
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold10:16821363..16826395
RNA-Seq ExpressionSpg015624
SyntenySpg015624
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041121.1 hypothetical protein E6C27_scaffold128G00290 [Cucumis melo var. makuwa]1.1e-1854.62Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPASAESSRSSSSTWLELYIESVTFQTRLCQGCTMCML-----KGFRGFRCVVFHVE
        MTEILS RLYGTVCT                  VEIELPVPD LP SAESS S+SSTWLELY ESV  +    +   + ++     +GFRGF CVVFHVE
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPASAESSRSSSSTWLELYIESVTFQTRLCQGCTMCML-----KGFRGFRCVVFHVE

Query:  CFISMISMFIRFNFQEGQR
          IS I MFI FN Q GQ+
Subjt:  CFISMISMFIRFNFQEGQR

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]3.6e-1452.21Show/hide
Query:  FGLSYTERTKRPRGNRSSLQTRKLAKTISIDYMT-EILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSD----------------FPNRVMSGLHL
        FGL Y E TKRPRGNR+SLQT +L KT+     T  +L           VEIELPVPDTLPTSAESS S+SS                 F N+VMSGLHL
Subjt:  FGLSYTERTKRPRGNRSSLQTRKLAKTISIDYMT-EILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSD----------------FPNRVMSGLHL

Query:  LFNVSGGSTDFLK
        +FNVS GST  ++
Subjt:  LFNVSGGSTDFLK

KAA0066850.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-1352.34Show/hide
Query:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM
        PR NR SLQT +L KT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  S+SS                 F N+VM
Subjt:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM

Query:  SGLHLLF
        SGLHL++
Subjt:  SGLHLLF

TYK21916.1 hypothetical protein E5676_scaffold494G00570 [Cucumis melo var. makuwa]3.2e-1864.84Show/hide
Query:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSDFPNRVMSGLHLLF
        PRGNRSSLQT +L  TISIDYMTEILS RLYGTVCT                  VEIELPVPD LPTSAESS S+SS F N+VMSGL+L++
Subjt:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSDFPNRVMSGLHLLF

TYK27997.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.1e-1352.34Show/hide
Query:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM
        PR NR SLQT +L KT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  S+SS                 F N+VM
Subjt:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM

Query:  SGLHLLF
        SGLHL++
Subjt:  SGLHLLF

TrEMBL top hitse value%identityAlignment
A0A5A7THH5 Uncharacterized protein5.3e-1954.62Show/hide
Query:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPASAESSRSSSSTWLELYIESVTFQTRLCQGCTMCML-----KGFRGFRCVVFHVE
        MTEILS RLYGTVCT                  VEIELPVPD LP SAESS S+SSTWLELY ESV  +    +   + ++     +GFRGF CVVFHVE
Subjt:  MTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPASAESSRSSSSTWLELYIESVTFQTRLCQGCTMCML-----KGFRGFRCVVFHVE

Query:  CFISMISMFIRFNFQEGQR
          IS I MFI FN Q GQ+
Subjt:  CFISMISMFIRFNFQEGQR

A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.8e-1452.21Show/hide
Query:  FGLSYTERTKRPRGNRSSLQTRKLAKTISIDYMT-EILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSD----------------FPNRVMSGLHL
        FGL Y E TKRPRGNR+SLQT +L KT+     T  +L           VEIELPVPDTLPTSAESS S+SS                 F N+VMSGLHL
Subjt:  FGLSYTERTKRPRGNRSSLQTRKLAKTISIDYMT-EILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSD----------------FPNRVMSGLHL

Query:  LFNVSGGSTDFLK
        +FNVS GST  ++
Subjt:  LFNVSGGSTDFLK

A0A5A7VI26 Putative DNA/RNA polymerases superfamily protein5.1e-1452.34Show/hide
Query:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM
        PR NR SLQT +L KT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  S+SS                 F N+VM
Subjt:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM

Query:  SGLHLLF
        SGLHL++
Subjt:  SGLHLLF

A0A5D3DE96 Uncharacterized protein1.5e-1864.84Show/hide
Query:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSDFPNRVMSGLHLLF
        PRGNRSSLQT +L  TISIDYMTEILS RLYGTVCT                  VEIELPVPD LPTSAESS S+SS F N+VMSGL+L++
Subjt:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSDFPNRVMSGLHLLF

A0A5D3DW05 Putative DNA/RNA polymerases superfamily protein5.1e-1452.34Show/hide
Query:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM
        PR NR SLQT +L KT+SIDYMTEILS R YGTVCTQ                 VEIELPVPDTLP+S ES  S+SS                 F N+VM
Subjt:  PRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQ-----------------VEIELPVPDTLPTSAESSRSSSSD----------------FPNRVM

Query:  SGLHLLF
        SGLHL++
Subjt:  SGLHLLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAGCGTCTGCTGAAAGTTCTAGATCAAG
CTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGG
TGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACTTTCAGGAGGGTCAGCGGGAAATAGCTCAAGCAAAGGCAACCATAGCAGAATCTGAG
TTCAACCTGTCTACCTCTGGTTTTTGTTTCGGTTTGAGCTACACAGAAAGAACTAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACTAT
TTCCATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAA
GTTCCAGATCAAGCTCCAGTGATTTTCCAAACCGAGTTATGTCAGGGCTGCACCTCTTGTTTAACGTTTCAGGAGGGTCAACGGACTTCTTGAAGCAGGAGACTGGTGGG
ATTCTTTTGGGAGAGATCTCTGAGAGAATGGGAGTCAATGGGATGCCTTTCACCCTACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCGGTGCCTGATACACTGCCAGCGTCTGCTGAAAGTTCTAGATCAAG
CTCCAGTACGTGGTTGGAGTTGTATATTGAGTCCGTTACTTTCCAAACCAGGTTATGTCAGGGCTGCACCATGTGTATGTTGAAAGGTTTCCGTGGATTCCGCTGTGTGG
TGTTTCATGTAGAATGTTTTATATCTATGATTAGTATGTTTATCAGGTTCAACTTTCAGGAGGGTCAGCGGGAAATAGCTCAAGCAAAGGCAACCATAGCAGAATCTGAG
TTCAACCTGTCTACCTCTGGTTTTTGTTTCGGTTTGAGCTACACAGAAAGAACTAAGAGGCCAAGAGGAAATAGGTCGAGTCTACAGACCAGGAAACTAGCTAAGACTAT
TTCCATTGACTACATGACTGAGATATTGAGCCCGAGGCTATATGGTACCGTGTGCACACAGGTAGAGATCGAGCTCCCAGTGCCTGATACACTGCCAACGTCTGCTGAAA
GTTCCAGATCAAGCTCCAGTGATTTTCCAAACCGAGTTATGTCAGGGCTGCACCTCTTGTTTAACGTTTCAGGAGGGTCAACGGACTTCTTGAAGCAGGAGACTGGTGGG
ATTCTTTTGGGAGAGATCTCTGAGAGAATGGGAGTCAATGGGATGCCTTTCACCCTACCCTAG
Protein sequenceShow/hide protein sequence
MTEILSPRLYGTVCTQVEIELPVPDTLPASAESSRSSSSTWLELYIESVTFQTRLCQGCTMCMLKGFRGFRCVVFHVECFISMISMFIRFNFQEGQREIAQAKATIAESE
FNLSTSGFCFGLSYTERTKRPRGNRSSLQTRKLAKTISIDYMTEILSPRLYGTVCTQVEIELPVPDTLPTSAESSRSSSSDFPNRVMSGLHLLFNVSGGSTDFLKQETGG
ILLGEISERMGVNGMPFTLP