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Spg015640 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015640
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationscaffold10:20176535..20178089
RNA-Seq ExpressionSpg015640
SyntenySpg015640
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030498047.1 uncharacterized protein LOC115713707 [Cannabis sativa]3.7e-1252.5Show/hide
Query:  PKQNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGKANILFLT
        P+  +   PQ +  SSLE++M +YMA  DAVIQS  AS+R +E+Q+GQLAN LK RPQG LP+D ++PRR+GK +   +T
Subjt:  PKQNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGKANILFLT

XP_030505532.1 uncharacterized protein LOC115720524 [Cannabis sativa]2.2e-1254.65Show/hide
Query:  PKQNKQALP-------------QQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK
        P Q +QA P             Q +  SSLE++M +YMA  DAVIQS  AS+R +ELQ+G LANELKARPQG LP+D K+PRR+GK
Subjt:  PKQNKQALP-------------QQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK

XP_030509134.1 uncharacterized protein LOC115723804 [Cannabis sativa]1.3e-1253.75Show/hide
Query:  PKQNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGKANILFLT
        P+  +   PQ +  SSLE++M +YMA  DAVIQS  AS+R +E+Q+GQLAN+LK RPQG LP+D K+PRR+GK +   +T
Subjt:  PKQNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGKANILFLT

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]3.7e-1252.5Show/hide
Query:  PKQNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGKANILFLT
        P+  +   PQ +  SSLE++M +YMA  DAVIQS  AS+R +E+Q+GQLAN+LK RPQG LP+D ++PRR+GK +   +T
Subjt:  PKQNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGKANILFLT

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]5.1e-1442.54Show/hide
Query:  NNQAENPILVKSVLEVDGVSTIRADIEMLVNALKNV--------TVVLPKQNKQALP-------------QQNSESSLEAMMTEYMASTDAVIQSNQASM
        N +A     V  VLEVD ++ + A +  + N   N+        +   P Q +QA P             Q    SSLE++M +YMA  DAVIQS  AS+
Subjt:  NNQAENPILVKSVLEVDGVSTIRADIEMLVNALKNV--------TVVLPKQNKQALP-------------QQNSESSLEAMMTEYMASTDAVIQSNQASM

Query:  RAMELQMGQLANELKARPQGKLPADIKHPRREGK
        R +ELQ+G LANELKARPQG LP+D ++PRR+GK
Subjt:  RAMELQMGQLANELKARPQGKLPADIKHPRREGK

TrEMBL top hitse value%identityAlignment
A0A5B6VNM1 Uncharacterized protein4.1e-0945.56Show/hide
Query:  NALKNVTVVLPKQNKQALPQQN-------SESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK
        NA++      P   KQ +P+QN       S SSLE ++ EYMA  D +IQS  AS+RA+E Q+G++A  L +RPQG LP+D K+ R +GK
Subjt:  NALKNVTVVLPKQNKQALPQQN-------SESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK

A0A6J1DW02 uncharacterized protein LOC1110248975.7e-1161.97Show/hide
Query:  QNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK
        Q  Q  P QN+ S+LE MM EYMA TDAVIQS  ASMR    Q+G LANELK RPQG  P   + PRREGK
Subjt:  QNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK

A0A6J1DYG0 uncharacterized protein LOC1110257645.2e-1263.38Show/hide
Query:  QNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK
        Q  Q  P QN+ S+LE MM EYMA TDAVIQS  ASMR  E Q+GQLANELK RPQG  P   + P+REGK
Subjt:  QNKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK

A0A6J1GJ68 uncharacterized protein LOC1114543441.4e-0957.81Show/hide
Query:  QQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK
        Q  S +S+E+++ EYMA  D VIQS QAS++ +E+Q+GQLA EL+ RP GKLPAD + P+REGK
Subjt:  QQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGK

A0A6J1H7K8 uncharacterized protein LOC1114611673.7e-1060.32Show/hide
Query:  QQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREG
        Q   E+SLE+++ EYMA  D VIQS QAS+R +E+Q+GQLANEL+ RP GKLP+D + P+REG
Subjt:  QQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATCCGCCTGGGGTAAGGTTCGAGCTTGATCCAGAAATTGAAAGGACATTCAGGAGAAGAAGGGGAGAGCAGCGTAGAAATCAAAATCCAATGGATAACGTGCC
GCGTCTCCCGCAGGTTCCAGAAGGTCAAGATGATCCCCATCAGAATCGTGTGCTGCAGCCTAATCCACCACTAGAGCAAAATGGACAGCAAAATAATCAGGCTGAGAATC
CTATCTTAGTTAAGAGTGTGTTAGAGGTTGATGGTGTGTCTACCATTAGGGCTGATATTGAAATGTTAGTTAACGCTCTTAAAAATGTGACAGTGGTATTGCCCAAGCAA
AATAAGCAGGCTTTGCCCCAACAAAATTCGGAGAGTTCTCTTGAGGCAATGATGACAGAATATATGGCTAGTACAGATGCCGTAATTCAAAGTAATCAAGCTTCAATGAG
AGCCATGGAATTGCAAATGGGTCAGCTAGCTAATGAGCTAAAGGCAAGGCCTCAAGGGAAACTTCCTGCGGATATTAAGCACCCTAGAAGGGAAGGTAAGGCAAATATTC
TTTTTCTCACTCCCAAAGCATTAAACAAGCTGTTTTGCAAACATTTCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATCCGCCTGGGGTAAGGTTCGAGCTTGATCCAGAAATTGAAAGGACATTCAGGAGAAGAAGGGGAGAGCAGCGTAGAAATCAAAATCCAATGGATAACGTGCC
GCGTCTCCCGCAGGTTCCAGAAGGTCAAGATGATCCCCATCAGAATCGTGTGCTGCAGCCTAATCCACCACTAGAGCAAAATGGACAGCAAAATAATCAGGCTGAGAATC
CTATCTTAGTTAAGAGTGTGTTAGAGGTTGATGGTGTGTCTACCATTAGGGCTGATATTGAAATGTTAGTTAACGCTCTTAAAAATGTGACAGTGGTATTGCCCAAGCAA
AATAAGCAGGCTTTGCCCCAACAAAATTCGGAGAGTTCTCTTGAGGCAATGATGACAGAATATATGGCTAGTACAGATGCCGTAATTCAAAGTAATCAAGCTTCAATGAG
AGCCATGGAATTGCAAATGGGTCAGCTAGCTAATGAGCTAAAGGCAAGGCCTCAAGGGAAACTTCCTGCGGATATTAAGCACCCTAGAAGGGAAGGTAAGGCAAATATTC
TTTTTCTCACTCCCAAAGCATTAAACAAGCTGTTTTGCAAACATTTCCTCTAA
Protein sequenceShow/hide protein sequence
MSDPPGVRFELDPEIERTFRRRRGEQRRNQNPMDNVPRLPQVPEGQDDPHQNRVLQPNPPLEQNGQQNNQAENPILVKSVLEVDGVSTIRADIEMLVNALKNVTVVLPKQ
NKQALPQQNSESSLEAMMTEYMASTDAVIQSNQASMRAMELQMGQLANELKARPQGKLPADIKHPRREGKANILFLTPKALNKLFCKHFL