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Spg015650 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015650
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description2-isopropylmalate synthase
Genome locationscaffold10:17300041..17302103
RNA-Seq ExpressionSpg015650
SyntenySpg015650
Gene Ontology termsGO:0009098 - leucine biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003852 - 2-isopropylmalate synthase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580949.1 2-isopropylmalate synthase 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.8e-5585.04Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAHQSGIHQDGMLKHR TYEIIPPEDIGY+RSN  GIVLGKLSGRHAL+S LR+LGY+ID D FDNVFWRFK +AEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVSKEVDIQVEEKRT
        V DADL+ALVSDEVSK+VDI+V E RT
Subjt:  VTDADLLALVSDEVSKEVDIQVEEKRT

XP_022141881.1 2-isopropylmalate synthase 2, chloroplastic-like isoform X1 [Momordica charantia]1.2e-5182.03Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PEDIGYERSNDAGIVLGKLSGRHALKS+L+ELGYE+DN+N DN+FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVS------KEVDIQV
        VTDADL ALVSDEV       K +D+QV
Subjt:  VTDADLLALVSDEVS------KEVDIQV

XP_022141882.1 2-isopropylmalate synthase 2, chloroplastic-like isoform X2 [Momordica charantia]1.2e-5182.03Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PEDIGYERSNDAGIVLGKLSGRHALKS+L+ELGYE+DN+N DN+FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVS------KEVDIQV
        VTDADL ALVSDEV       K +D+QV
Subjt:  VTDADLLALVSDEVS------KEVDIQV

XP_022934697.1 2-isopropylmalate synthase 2, chloroplastic-like isoform X1 [Cucurbita moschata]2.0e-5182.68Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAHQSGIHQDGMLKHR TYEII PEDIGY+RSN   IVLGKLSGRHALKS LR+LGYEID D  DNVFWRFK +AEQK R
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVSKEVDIQVEEKRT
        V DADL+ALVSD VSK+VDI+V E RT
Subjt:  VTDADLLALVSDEVSKEVDIQVEEKRT

XP_023528730.1 2-isopropylmalate synthase 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]1.5e-5484.25Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAHQSGIHQDGMLKHR TYEIIPPEDIGY+RSN  GIVLGKLSGRHALKS+LR+LGYEID D  DNVFWRFK +AE KKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVSKEVDIQVEEKRT
        + DADL+ALVSDEVSK+VDI+V E RT
Subjt:  VTDADLLALVSDEVSKEVDIQVEEKRT

TrEMBL top hitse value%identityAlignment
A0A6J1CKJ3 2-isopropylmalate synthase5.8e-5282.03Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PEDIGYERSNDAGIVLGKLSGRHALKS+L+ELGYE+DN+N DN+FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVS------KEVDIQV
        VTDADL ALVSDEV       K +D+QV
Subjt:  VTDADLLALVSDEVS------KEVDIQV

A0A6J1CL37 2-isopropylmalate synthase5.8e-5282.03Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PEDIGYERSNDAGIVLGKLSGRHALKS+L+ELGYE+DN+N DN+FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVS------KEVDIQV
        VTDADL ALVSDEV       K +D+QV
Subjt:  VTDADLLALVSDEVS------KEVDIQV

A0A6J1F3I8 2-isopropylmalate synthase 2, chloroplastic-like isoform X19.8e-5282.68Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAHQSGIHQDGMLKHR TYEII PEDIGY+RSN   IVLGKLSGRHALKS LR+LGYEID D  DNVFWRFK +AEQK R
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVSKEVDIQVEEKRT
        V DADL+ALVSD VSK+VDI+V E RT
Subjt:  VTDADLLALVSDEVSKEVDIQVEEKRT

A0A6J1F3K1 2-isopropylmalate synthase8.3e-5184.75Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PEDIGYERSNDAGIVLGKLSGRHALKS+L ELGYE+DN+  DNVFWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVSKEV
        VTDAD+ ALVSDEV + +
Subjt:  VTDADLLALVSDEVSKEV

A0A6J1G9D1 2-isopropylmalate synthase2.2e-5188.6Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+GLNVQPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PEDIGYERSNDAGIVLGKLSGRHALKS+L ELGYE+DN+N DNVFWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEV
        VTD DL ALVSDEV
Subjt:  VTDADLLALVSDEV

SwissProt top hitse value%identityAlignment
O04973 2-isopropylmalate synthase A7.0e-4776.32Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEYSGL VQPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII P+D+G  RSN+AGIVLGKLSGRHALKSK+ ELGY+ID    +++FWRFK VAE+KK+
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEV
        +TD DL+AL+SDEV
Subjt:  VTDADLLALVSDEV

O04974 2-isopropylmalate synthase B1.7e-4069.3Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VE  SGL+VQPHKAIVGANAF H+SGIHQDGMLKH+ TYEII PEDIG  R+N++GIV GKLSG    K K+ ELGYEI+    D++FWRFK VAE+KK+
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEV
        +TD DL+AL+SDEV
Subjt:  VTDADLLALVSDEV

Q39891 Probable 2-isopropylmalate synthase7.8e-3860.16Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEYSG+++QPHK +VGANAF H SGIHQDGMLKH+ TYE I PE+IG++R+   GIVLGKLSG  AL+ +L ELGY++  D  D+VFW+FK +AE+KK 
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVS------DEVSKEVDIQV
        VTD DL ALVS      + + K  D+QV
Subjt:  VTDADLLALVS------DEVSKEVDIQV

Q9C550 2-isopropylmalate synthase 2, chloroplastic3.7e-4878.95Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+G+  QPHKAIVGANAFAH+SGIHQDGMLKH+ TYEI+ PE+IG ERSNDAGIVLGKLSGRHALK +L ELGY +D+    N+FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEV
        VTDADL+ALVSDEV
Subjt:  VTDADLLALVSDEV

Q9LPR4 2-isopropylmalate synthase 1, chloroplastic3.7e-4872.66Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+G+  QPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PE+IG ERSNDAGIVLGKLSGRHALK +L ELGY++D++    +FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVS------KEVDIQV
        VTDAD++ALVSDEV       K +DIQ+
Subjt:  VTDADLLALVSDEVS------KEVDIQV

Arabidopsis top hitse value%identityAlignment
AT1G18500.1 methylthioalkylmalate synthase-like 42.7e-4972.66Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+G+  QPHKAIVGANAFAH+SGIHQDGMLKH+ TYEII PE+IG ERSNDAGIVLGKLSGRHALK +L ELGY++D++    +FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEVS------KEVDIQV
        VTDAD++ALVSDEV       K +DIQ+
Subjt:  VTDADLLALVSDEVS------KEVDIQV

AT1G74040.1 2-isopropylmalate synthase 12.7e-4978.95Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        VEEY+G+  QPHKAIVGANAFAH+SGIHQDGMLKH+ TYEI+ PE+IG ERSNDAGIVLGKLSGRHALK +L ELGY +D+    N+FWRFK VAEQKKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSDEV
        VTDADL+ALVSDEV
Subjt:  VTDADLLALVSDEV

AT5G23010.1 methylthioalkylmalate synthase 13.6e-3863.03Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        V+EY+GL VQ HK IVGAN F H+SGIHQDG+LK+RSTYEI+ PEDIG  +S ++G+VLGKLSGRHA+K +L+ELGYE+D++  + VF  F+ + + KKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALV--SDEVSKE
        +TDADL ALV  SDE+S E
Subjt:  VTDADLLALV--SDEVSKE

AT5G23020.1 2-isopropylmalate synthase 21.0e-3759.66Show/hide
Query:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR
        V+E++G+ VQPHK IVG N F H+SGIHQDG+LK+RSTYEI+ PED+G  +S ++GIVLGKLSGRHA+K +L+ELGYEI ++ F+++F R++ + + KKR
Subjt:  VEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKR

Query:  VTDADLLALVSD--EVSKE
        +TDADL ALV +  E+S E
Subjt:  VTDADLLALVSD--EVSKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAGTAGAAGAGTACAGTGGCTTGAATGTACAGCCACACAAGGCTATCGTTGGAGCTAATGCTTTTGCTCATCAAAGTGGCATCCACCAGGATGGAATGCTTAAGCA
CAGAAGTACTTACGAAATCATACCCCCTGAAGATATTGGCTATGAACGATCTAATGATGCTGGTATTGTTCTAGGAAAACTTAGTGGACGCCATGCCCTTAAAAGTAAAC
TTCGAGAGCTTGGTTATGAGATTGACAATGACAACTTTGACAACGTATTTTGGCGTTTCAAAGTAGTAGCTGAACAAAAAAAGAGAGTTACAGATGCAGATCTTCTAGCA
TTGGTATCTGATGAAGTTTCTAAGGAAGTTGACATTCAAGTGGAGGAAAAAAGAACATTGTTTACATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAGTAGAAGAGTACAGTGGCTTGAATGTACAGCCACACAAGGCTATCGTTGGAGCTAATGCTTTTGCTCATCAAAGTGGCATCCACCAGGATGGAATGCTTAAGCA
CAGAAGTACTTACGAAATCATACCCCCTGAAGATATTGGCTATGAACGATCTAATGATGCTGGTATTGTTCTAGGAAAACTTAGTGGACGCCATGCCCTTAAAAGTAAAC
TTCGAGAGCTTGGTTATGAGATTGACAATGACAACTTTGACAACGTATTTTGGCGTTTCAAAGTAGTAGCTGAACAAAAAAAGAGAGTTACAGATGCAGATCTTCTAGCA
TTGGTATCTGATGAAGTTTCTAAGGAAGTTGACATTCAAGTGGAGGAAAAAAGAACATTGTTTACATGA
Protein sequenceShow/hide protein sequence
MPVEEYSGLNVQPHKAIVGANAFAHQSGIHQDGMLKHRSTYEIIPPEDIGYERSNDAGIVLGKLSGRHALKSKLRELGYEIDNDNFDNVFWRFKVVAEQKKRVTDADLLA
LVSDEVSKEVDIQVEEKRTLFT