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Spg015760 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015760
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionLMBR1 domain-containing protein 2 homolog A-like
Genome locationscaffold10:20486199..20489166
RNA-Seq ExpressionSpg015760
SyntenySpg015760
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026858.1 LMBR1 domain-containing protein 2-like A [Cucurbita argyrosperma subsp. argyrosperma]7.0e-1792.16Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERR+STGWKYVSTLRHARSGKLGSI DTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
XP_004143454.1 LMBR1 domain-containing protein 2 homolog A [Cucumis sativus]3.1e-1794.12Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSI DTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
XP_022950670.1 LMBR1 domain-containing protein 2 homolog A-like [Cucurbita moschata]7.0e-1792.16Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRH R+GKLGSIFDTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
XP_023003088.1 LMBR1 domain-containing protein 2 homolog A-like [Cucurbita maxima]7.0e-1792.16Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERR+STGWKYVSTLRHARSGKLGSI DTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
XP_023544635.1 LMBR1 domain-containing protein 2 homolog A-like [Cucurbita pepo subsp. pepo]7.0e-1792.16Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRH R+GKLGSIFDTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
TrEMBL top hitse value%identityAlignment
A0A0A0KIU1 Uncharacterized protein1.5e-1794.12Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSI DTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
A0A5A7T436 LMBR1 domain-containing protein 2-like protein A7.6e-1790.2Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDT+KNYERRSSTGWKYVSTLRH RSGKLGSI DTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
A0A6J1GGE5 LMBR1 domain-containing protein 2 homolog A-like3.4e-1792.16Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRH R+GKLGSIFDTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
A0A6J1HDX3 LMBR1 domain-containing protein 2 homolog A-like5.8e-1792.16Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERR STGWKYVSTLRHARSGKLGSI DTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
A0A6J1KVG8 LMBR1 domain-containing protein 2 homolog A-like3.4e-1792.16Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
        SQYMTYVMKALELEDTIKNYERR+STGWKYVSTLRHARSGKLGSI DTL +
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65290.1 LMBR1-like membrane protein3.8e-1357.41Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGYSSR
        S+Y+TYV +AL LEDT+KNYERR +TGWKY+S+ R  R+GK+G++ D+L +  R
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGYSSR
AT5G65290.2 LMBR1-like membrane protein3.8e-1357.41Show/hide
Query:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGYSSR
        S+Y+TYV +AL LEDT+KNYERR +TGWKY+S+ R  R+GK+G++ D+L +  R
Subjt:  SQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGYSSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATATTATCGGGATTTTTTGCCTTCCTCCCACCTTCTTTATCTTTCCCTCATTCCCTCGCTCCCGTGCTCAGTGCTCCAGCGCCGCTTCCACGCTCTAGTGGCTC
CACTCCGCTTCGGACGCCGCTTCGACATAATCCCTCTTTTTCCCTCGCTCCATCAAAACTTCCAGCCGTCTCTCGCTCCAGTGCCGCCGCGGCTAGTCGTCGCTCTCTTT
TTCTCTCGCGTAAAGAACTGCCGGAGACTCAGCCATCTCCTACTGTCTCCGTCAGTGTAGAGGAGAACCAGGCTCGCGGCGTTCGTTCCAGCTACAAAAGAGATAATGGA
GGTGTCAAGCACGTGCTTAGCGCCAGCCAATATATGACATACGTTATGAAGGCCCTTGAACTTGAGGACACTATAAAGAATTATGAACGACGCTCATCAACTGGATGGAA
ATATGTTTCAACCCTCAGGCATGCTCGAAGTGGGAAGTTGGGGTCTATCTTCGATACCCTTGGATACAGCTCACGTACTGCATCTCAGTTCCTTCCTTACCCGAACAAAC
CAACTTGCGTCAGAAGTATCGATGTCTTTGTAGAATATGTGAAATCTTGCTTCATATACTGGAGGGAATTTGAAGTCATACATGTTTGGCATATAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATATTATCGGGATTTTTTGCCTTCCTCCCACCTTCTTTATCTTTCCCTCATTCCCTCGCTCCCGTGCTCAGTGCTCCAGCGCCGCTTCCACGCTCTAGTGGCTC
CACTCCGCTTCGGACGCCGCTTCGACATAATCCCTCTTTTTCCCTCGCTCCATCAAAACTTCCAGCCGTCTCTCGCTCCAGTGCCGCCGCGGCTAGTCGTCGCTCTCTTT
TTCTCTCGCGTAAAGAACTGCCGGAGACTCAGCCATCTCCTACTGTCTCCGTCAGTGTAGAGGAGAACCAGGCTCGCGGCGTTCGTTCCAGCTACAAAAGAGATAATGGA
GGTGTCAAGCACGTGCTTAGCGCCAGCCAATATATGACATACGTTATGAAGGCCCTTGAACTTGAGGACACTATAAAGAATTATGAACGACGCTCATCAACTGGATGGAA
ATATGTTTCAACCCTCAGGCATGCTCGAAGTGGGAAGTTGGGGTCTATCTTCGATACCCTTGGATACAGCTCACGTACTGCATCTCAGTTCCTTCCTTACCCGAACAAAC
CAACTTGCGTCAGAAGTATCGATGTCTTTGTAGAATATGTGAAATCTTGCTTCATATACTGGAGGGAATTTGAAGTCATACATGTTTGGCATATAGCTTGA
Protein sequenceShow/hide protein sequence
MQILSGFFAFLPPSLSFPHSLAPVLSAPAPLPRSSGSTPLRTPLRHNPSFSLAPSKLPAVSRSSAAAASRRSLFLSRKELPETQPSPTVSVSVEENQARGVRSSYKRDNG
GVKHVLSASQYMTYVMKALELEDTIKNYERRSSTGWKYVSTLRHARSGKLGSIFDTLGYSSRTASQFLPYPNKPTCVRSIDVFVEYVKSCFIYWREFEVIHVWHIA