; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015801 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015801
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3
Genome locationscaffold6:44824834..44827718
RNA-Seq ExpressionSpg015801
SyntenySpg015801
Gene Ontology termsNA
InterPro domainsIPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650054.1 hypothetical protein Csa_010079 [Cucumis sativus]2.5e-3695.6Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASACQRIASRISQSSFRT +RTNS AKS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

XP_004147213.1 uncharacterized protein LOC101221008 isoform X1 [Cucumis sativus]3.3e-3689.11Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDFSFFLLCN
        MASACQRIASRISQSSFRT +RTNS AKS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ     L C 
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDFSFFLLCN

Query:  S
        S
Subjt:  S

XP_004147214.1 uncharacterized protein LOC101221008 isoform X2 [Cucumis sativus]1.1e-3694.57Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASACQRIASRISQSSFRT +RTNS AKS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ+
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

XP_022154048.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]3.3e-3692.39Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQD
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

XP_022937856.1 uncharacterized protein LOC111444048 isoform X2 [Cucurbita moschata]7.4e-3692.39Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASAC+RIASRISQSSFRT+LRTNSPAKSPSS FPLP KS+APSV RFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQD
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

TrEMBL top hitse value%identityAlignment
A0A0A0L1I6 Uncharacterized protein7.0e-5673.91Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDFSFFLLCN
        MASACQRIASRISQSSFRT +RTNS AKS SSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDF F LL N
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDFSFFLLCN

Query:  SLSVSLCWYLLILVVFVIGALFRKSCRLC----------MKHIISIVNMLERNRLKFVELSYYGAVNQFQMQLMVRETYLLFFE
                 L + V+FV+  +F  SC LC          + HIISIVNMLERNRL+    S YGAVN FQMQLMVRETYLLF +
Subjt:  SLSVSLCWYLLILVVFVIGALFRKSCRLC----------MKHIISIVNMLERNRLKFVELSYYGAVNQFQMQLMVRETYLLFFE

A0A1S3BL94 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X24.7e-3693.48Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASACQRIASRISQSSFRT +RTNS AKS SS FPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ+
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

A0A6J1DJ71 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X31.6e-3692.39Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQD
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

A0A6J1DKL6 uncharacterized protein LOC111021400 isoform X24.7e-3691.3Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASAC RIASRISQSSFR  +RT SP KSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQ+
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

A0A6J1FBJ4 uncharacterized protein LOC111444048 isoform X23.6e-3692.39Show/hide
Query:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASAC+RIASRISQSSFRT+LRTNSPAKSPSS FPLP KS+APSV RFSLARSPSELGCVQSLLPFH+AVAGARMISCLSTNSRSCRALSQD
Subjt:  MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17310.1 unknown protein1.3e-1756.99Show/hide
Query:  MASACQRIASRISQSSFRTVLR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ
        MASAC+++ +R S SS ++ LR  T S + + S+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQ
Subjt:  MASACQRIASRISQSSFRTVLR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQ

AT4G17310.2 unknown protein5.7e-1856.38Show/hide
Query:  MASACQRIASRISQSSFRTVLR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        MASAC+++ +R S SS ++ LR  T S + + S+ F LPS+ T    R FS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RALSQ+
Subjt:  MASACQRIASRISQSSFRTVLR--TNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

AT5G47455.2 unknown protein1.7e-1753.12Show/hide
Query:  RIASRISQSSFRTVLRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        R  SR S SSF++ +R+          +SPA + S+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QD
Subjt:  RIASRISQSSFRTVLRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD

AT5G47455.4 unknown protein9.7e-1852.53Show/hide
Query:  RIASRISQSSFRTVLRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDFSF
        R  SR S SSF++ +R+          +SPA + S+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QD +F
Subjt:  RIASRISQSSFRTVLRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDFSF

AT5G47455.5 unknown protein1.7e-1753.12Show/hide
Query:  RIASRISQSSFRTVLRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD
        R  SR S SSF++ +R+          +SPA + S+ F +PSK  A  + RFS +R PSELGCVQSLLP H  VA AR+ SCLST SRS RAL+QD
Subjt:  RIASRISQSSFRTVLRT----------NSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCCCAATCTTCCTTCAGAACAGTCCTCCGTACAAATTCTCCGGCCAAATCTCCATCTTCTCCGTTCCCTCTACC
GTCTAAATCCACTGCACCTTCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGCGTTCAATCCCTATTGCCTTTTCACGACGCAGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGACTTTTCCTTTTTCTTGCTCTGCAATTCTCTGTCAGTGTCCTTGTGTTGGTATTTG
CTGATTCTTGTTGTCTTTGTCATTGGTGCATTGTTCCGCAAATCTTGCAGATTGTGTATGAAGCACATAATATCAATTGTCAATATGCTTGAAAGAAATAGATTGAAGTT
TGTGGAGCTTTCCTATTATGGTGCTGTGAATCAATTTCAAATGCAATTGATGGTACGTGAGACATATTTGCTGTTTTTTGAAGAGCTAGGTTTATCCGTTCCCAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGCTTGCCAAAGAATTGCGAGCAGAATCTCCCAATCTTCCTTCAGAACAGTCCTCCGTACAAATTCTCCGGCCAAATCTCCATCTTCTCCGTTCCCTCTACC
GTCTAAATCCACTGCACCTTCTGTTCGCCGATTCTCGCTCGCCAGGTCTCCGTCGGAGCTGGGATGCGTTCAATCCCTATTGCCTTTTCACGACGCAGTTGCTGGAGCGA
GAATGATTTCGTGTCTGAGCACAAATTCGAGGAGTTGTCGTGCGCTTTCTCAGGACTTTTCCTTTTTCTTGCTCTGCAATTCTCTGTCAGTGTCCTTGTGTTGGTATTTG
CTGATTCTTGTTGTCTTTGTCATTGGTGCATTGTTCCGCAAATCTTGCAGATTGTGTATGAAGCACATAATATCAATTGTCAATATGCTTGAAAGAAATAGATTGAAGTT
TGTGGAGCTTTCCTATTATGGTGCTGTGAATCAATTTCAAATGCAATTGATGGTACGTGAGACATATTTGCTGTTTTTTGAAGAGCTAGGTTTATCCGTTCCCAGGTGA
Protein sequenceShow/hide protein sequence
MASACQRIASRISQSSFRTVLRTNSPAKSPSSPFPLPSKSTAPSVRRFSLARSPSELGCVQSLLPFHDAVAGARMISCLSTNSRSCRALSQDFSFFLLCNSLSVSLCWYL
LILVVFVIGALFRKSCRLCMKHIISIVNMLERNRLKFVELSYYGAVNQFQMQLMVRETYLLFFEELGLSVPR