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Spg015820 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015820
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold6:44806846..44807909
RNA-Seq ExpressionSpg015820
SyntenySpg015820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021801569.1 uncharacterized protein LOC110745747 isoform X1 [Prunus avium]7.9e-1741.96Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISCS-ASDKWIWHYDRRGEYSVK
        +LL  G++K +G+G    ++ D WIP P++FR  SP V   E   V+DFI     W+++ L  C   EDV+ I  +P+S +   D+WIWHY   G YSVK
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISCS-ASDKWIWHYDRRGEYSVK

Query:  SGYKLSMKSGQE
        SGY+L M   +E
Subjt:  SGYKLSMKSGQE

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]1.1e-1849.02Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFR-ITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPIS-CSASDKWIWHYDRRGEYSV
        DLL KG++  +GNG +INIF DPWIPRP +FR IT+P  PY  +  VAD I+ + QWD+  +      ED ++I  +P+S  ++ D WIWH+D+RG Y+V
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFR-ITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPIS-CSASDKWIWHYDRRGEYSV

Query:  KS
        KS
Subjt:  KS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]2.1e-1743.64Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTF---RITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISC-SASDKWIWHYDRRGEY
        DLL KG++  +GNG +I  F DPW+PRP+TF   R  +  +    +  VA FI+    WD+  +      ED ++I  +PIS  +  D W+WHYD+RG Y
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTF---RITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISC-SASDKWIWHYDRRGEY

Query:  SVKSGYKLSM
        SV+SGYKL M
Subjt:  SVKSGYKLSM

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]3.5e-1742.06Show/hide
Query:  LLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYL--ENAVVADFISRSWQWDIEKLYQ-CLNWEDVEVIRCLPISCSASDKWIWHYDRRGEYSV
        ++KKG++  +GNG  I IF D W+PRP TFR   P+ P     ++VVAD I    QWD  KL Q  L+ +  E+++    +  A D+ +WHYD+RG YSV
Subjt:  LLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYL--ENAVVADFISRSWQWDIEKLYQ-CLNWEDVEVIRCLPISCSASDKWIWHYDRRGEYSV

Query:  KSGYKLSMKSG-QEVVTLTEQTVKWW
        KSGY+L+++S   +  + TE + K+W
Subjt:  KSGYKLSMKSG-QEVVTLTEQTVKWW

XP_030505522.1 uncharacterized protein LOC115720515 [Cannabis sativa]3.0e-1635.71Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLEN-AVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISC-SASDKWIWHYDRRGEYSV
        +LL KG+++ +GNG +  +F DPWIPRP +F    P+   + N  +V++ I +S QW+I+ ++Q  +  D ++I  +PI+     D W+WH+   G YSV
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLEN-AVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISC-SASDKWIWHYDRRGEYSV

Query:  KSGYKLSM-KSGQEVVTLTEQTVKWW
        KSGY L++     +  +  E    WW
Subjt:  KSGYKLSM-KSGQEVVTLTEQTVKWW

TrEMBL top hitse value%identityAlignment
A0A6J1BRN0 uncharacterized protein LOC1110047875.3e-1949.02Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFR-ITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPIS-CSASDKWIWHYDRRGEYSV
        DLL KG++  +GNG +INIF DPWIPRP +FR IT+P  PY  +  VAD I+ + QWD+  +      ED ++I  +P+S  ++ D WIWH+D+RG Y+V
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFR-ITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPIS-CSASDKWIWHYDRRGEYSV

Query:  KS
        KS
Subjt:  KS

A0A6J1DX30 uncharacterized protein LOC1110248741.0e-1743.64Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTF---RITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISC-SASDKWIWHYDRRGEY
        DLL KG++  +GNG +I  F DPW+PRP+TF   R  +  +    +  VA FI+    WD+  +      ED ++I  +PIS  +  D W+WHYD+RG Y
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTF---RITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISC-SASDKWIWHYDRRGEY

Query:  SVKSGYKLSM
        SV+SGYKL M
Subjt:  SVKSGYKLSM

A0A6P5RF81 uncharacterized protein LOC110745747 isoform X13.8e-1741.96Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISCS-ASDKWIWHYDRRGEYSVK
        +LL  G++K +G+G    ++ D WIP P++FR  SP V   E   V+DFI     W+++ L  C   EDV+ I  +P+S +   D+WIWHY   G YSVK
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISCS-ASDKWIWHYDRRGEYSVK

Query:  SGYKLSMKSGQE
        SGY+L M   +E
Subjt:  SGYKLSMKSGQE

A0A803PM68 Uncharacterized protein5.0e-1736.22Show/hide
Query:  LLKKGIKKNLGNGLSINIFHDPWIPRPSTFRI-TSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPIS-CSASDKWIWHYDRRGEYSVK
        +++KG +  +GNG S+ +  DPW+PRP TF++   P +P  E   V D +  + +WD E +    N  D E+I  +P S     DK +WHY + GEYSV+
Subjt:  LLKKGIKKNLGNGLSINIFHDPWIPRPSTFRI-TSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPIS-CSASDKWIWHYDRRGEYSVK

Query:  SGYKLSMK-SGQEVVTLTEQTVKWWHV
        SGY+++      ++ + TE T +WW +
Subjt:  SGYKLSMK-SGQEVVTLTEQTVKWWHV

M5XJH9 Uncharacterized protein (Fragment)2.2e-1741.96Show/hide
Query:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISCS-ASDKWIWHYDRRGEYSVK
        +LL  G++K +G+G    ++ D WIPRP++FR  SP V   E   V+DFI     W+++ L  C + EDV+ I  +P+S +   D+W+WHY   G YSVK
Subjt:  DLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISCS-ASDKWIWHYDRRGEYSVK

Query:  SGYKLSMKSGQE
        SGY+L M   +E
Subjt:  SGYKLSMKSGQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein5.1e-0633.64Show/hide
Query:  LLKKGIKKNLGNGLSINIFHDPWI----PRPSTFRITSPVVPYLENAVVADFISRS--WQWDIEKLYQCLNWEDVEVIRCLPISCSAS-DKWIWHYDRRG
        LLKKG +  +G+G +I I  D  +    PRP     T     Y E  +   F  +   + WD  K+ Q ++  D   I  + ++ S   DK IW+Y+  G
Subjt:  LLKKGIKKNLGNGLSINIFHDPWI----PRPSTFRITSPVVPYLENAVVADFISRS--WQWDIEKLYQCLNWEDVEVIRCLPISCSAS-DKWIWHYDRRG

Query:  EYSVKSGYKL
        EY+V+SGY L
Subjt:  EYSVKSGYKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTTTGAAAAAAGGCATAAAGAAGAATTTGGGAAATGGCCTGTCTATAAATATTTTCCACGATCCTTGGATACCGAGGCCTTCCACTTTCCGAATCACTTCACC
TGTGGTACCTTATTTGGAGAATGCGGTAGTGGCGGACTTTATTTCCCGATCGTGGCAGTGGGATATTGAGAAGCTATACCAGTGCCTAAATTGGGAGGATGTGGAGGTGA
TAAGATGTCTTCCAATTAGTTGTTCGGCCTCGGACAAATGGATTTGGCATTATGATAGAAGGGGTGAGTATTCAGTGAAAAGTGGGTATAAGCTAAGTATGAAGAGTGGT
CAAGAGGTTGTGACCCTCACTGAGCAGACAGTGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAG
GAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCGTGTTGAGAAGCAACAGTGTCGTCAGACGCGGGGAGGCATGGTGTC
AGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTT
TGGGAATGGGTTTCCAAGGACAGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTTTGAAAAAAGGCATAAAGAAGAATTTGGGAAATGGCCTGTCTATAAATATTTTCCACGATCCTTGGATACCGAGGCCTTCCACTTTCCGAATCACTTCACC
TGTGGTACCTTATTTGGAGAATGCGGTAGTGGCGGACTTTATTTCCCGATCGTGGCAGTGGGATATTGAGAAGCTATACCAGTGCCTAAATTGGGAGGATGTGGAGGTGA
TAAGATGTCTTCCAATTAGTTGTTCGGCCTCGGACAAATGGATTTGGCATTATGATAGAAGGGGTGAGTATTCAGTGAAAAGTGGGTATAAGCTAAGTATGAAGAGTGGT
CAAGAGGTTGTGACCCTCACTGAGCAGACAGTGAAGTGGTGGCACGTCGAGTGTCGCCCATCGGGCCATGTCAGAGGGCCGAGAGAGAGAAGTGCCATGATGCGATCGAG
GAGGACGATGCATCATCCAACACACCAAGATGAGTGGACATTGATGTCACAAGAAGGCATGAGCGTGTTGAGAAGCAACAGTGTCGTCAGACGCGGGGAGGCATGGTGTC
AGCTCTCCACCACCCCTGGGCCCTGTGGCCTAAGTGAGCTACCCCATGGCACATGCGTGTGTCATGGCGTGGGCGAGCGTTGCAAGACGAGTGTCTTGGGCGTCTTCCTT
TGGGAATGGGTTTCCAAGGACAGTGTCGGGCGGCACGGGTGTGCCGACATTGCGCCCCCGCCCATGGGCTAG
Protein sequenceShow/hide protein sequence
MDLLKKGIKKNLGNGLSINIFHDPWIPRPSTFRITSPVVPYLENAVVADFISRSWQWDIEKLYQCLNWEDVEVIRCLPISCSASDKWIWHYDRRGEYSVKSGYKLSMKSG
QEVVTLTEQTVKWWHVECRPSGHVRGPRERSAMMRSRRTMHHPTHQDEWTLMSQEGMSVLRSNSVVRRGEAWCQLSTTPGPCGLSELPHGTCVCHGVGERCKTSVLGVFL
WEWVSKDSVGRHGCADIAPPPMG