CuGenDBv2

Gene ID	Spg015867
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Copper ion binding protein
Genome location	scaffold6:43648092..43651966
RNA-Seq Expression	Spg015867
Synteny	Spg015867
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6577605.1 hypothetical protein SDJN03_25179, partial [Cucurbita argyrosperma subsp. sororia]

1.6e-81

84.86

Show/hide

Query:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESE
        SLPRSIMGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSGMLKGSTSDGWPHQ+PPLFLP+IPP+HSAN ELDAIRS+LQESE
Subjt:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESE

Query:  RVVEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK
        RVVEKLQK ED M+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++  SSVEK
Subjt:  RVVEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK

XP_008448899.1 PREDICTED: uncharacterized protein LOC103490925 [Cucumis melo]

9.0e-80

84.53

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDT+KPKRKPRRNR+KVPQESK    KVD K+ SDDSG LKGSTSDGWPHQ PPLFLP+IPP+H ANAELDAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV

Query:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK ED ML+EVTQRAKDLHDKEFKLPYQKPMPC+AES+ACFQCYK++PND LKCARLVKNF +CNRQARQ++SS EK
Subjt:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

XP_022152722.1 uncharacterized protein LOC111020378 [Momordica charantia]

4.8e-81

86.19

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV
        MGDFSIQISSNLV+ML+DDTEKPKRKPRRNRTKVPQESK    KVD KH S DSGMLKGSTSDGWPHQ PPLFLPVIPP+HSAN ELDAIRSVL+ESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV

Query:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VE+LQK E+ M+QEVTQRAKDLHD+EFKLPYQKPMPCLAES ACFQCYK++ NDLLKCAR VKNFADCNRQARQQMSS EK
Subjt:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

XP_022965185.1 uncharacterized protein LOC111465118 [Cucurbita maxima]

3.3e-82

84.7

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Query:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESE
        SLPRSIMGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSG+LKGSTSDGWPHQ+PPLFLP+IPP+HSAN ELDAIRS+LQESE
Subjt:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESE

Query:  RVVEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        RVV+KLQK ED M+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++SSVEK
Subjt:  RVVEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

XP_038876833.1 uncharacterized protein LOC120069208 [Benincasa hispida]

7.4e-82

86.74

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDTEKPKRKPRRNR+KVPQESK    KVD KH SDDSGMLKGSTSDGWP+Q PPLFLP+IPP+HSAN ELDAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV

Query:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK ED ML+EVTQRAKDLHDKEFKLPYQKPMPCLAES+ACFQCYK++PN++LKCARLVKNF +CNRQARQQ+SSVEK
Subjt:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BKT1 uncharacterized protein LOC103490925

4.4e-80

84.53

Show/hide

Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDT+KPKRKPRRNR+KVPQESK    KVD K+ SDDSG LKGSTSDGWPHQ PPLFLP+IPP+H ANAELDAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV

Query:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK ED ML+EVTQRAKDLHDKEFKLPYQKPMPC+AES+ACFQCYK++PND LKCARLVKNF +CNRQARQ++SS EK
Subjt:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

A0A5D3D7J8 Uncharacterized protein

4.4e-80

84.53

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV
        MGDFSIQISSNLV+MLIDDT+KPKRKPRRNR+KVPQESK    KVD K+ SDDSG LKGSTSDGWPHQ PPLFLP+IPP+H ANAELDAIRSVLQESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV

Query:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VEKLQK ED ML+EVTQRAKDLHDKEFKLPYQKPMPC+AES+ACFQCYK++PND LKCARLVKNF +CNRQARQ++SS EK
Subjt:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

A0A6J1DFM6 uncharacterized protein LOC111020378

2.3e-81

86.19

Show/hide

Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV
        MGDFSIQISSNLV+ML+DDTEKPKRKPRRNRTKVPQESK    KVD KH S DSGMLKGSTSDGWPHQ PPLFLPVIPP+HSAN ELDAIRSVL+ESERV
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESK----KVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERV

Query:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        VE+LQK E+ M+QEVTQRAKDLHD+EFKLPYQKPMPCLAES ACFQCYK++ NDLLKCAR VKNFADCNRQARQQMSS EK
Subjt:  VEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

A0A6J1E6U2 uncharacterized protein LOC111431139

1.8e-78

84.36

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Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERVVEKL
        MGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSGMLKGSTSDGWPHQ+PPLFLP+IPP+HSAN ELDAIRS+LQESERVVEKL
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERVVEKL

Query:  QKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK
        QK ED M+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++  SSVEK
Subjt:  QKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQM--SSVEK

A0A6J1HN12 uncharacterized protein LOC111465118

1.6e-82

84.7

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Query:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESE
        SLPRSIMGDFSIQISSNLV+MLIDDTEKPKRKPRRNRTK PQ   KVD KH+SDDSG+LKGSTSDGWPHQ+PPLFLP+IPP+HSAN ELDAIRS+LQESE
Subjt:  SLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESE

Query:  RVVEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        RVV+KLQK ED M+QEVTQRAK+LHDKEFKLPYQKPMPC+AESEACFQCYK++PND LKCA LVK+F +CNRQARQ++SSVEK
Subjt:  RVVEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G12340.1 copper ion binding

2.7e-34

46.89

Show/hide

Query:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERVVEKL
        MGDFSIQISS L++ L +  ++PKR+ ++ + KV  +SK+   K   D+    K +     P Q PP F P IPP  +A+ EL++I+SV++ESE+V+EKL
Subjt:  MGDFSIQISSNLVDMLIDDTEKPKRKPRRNRTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERVVEKL

Query:  QKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK
        +  E  +++EVT+RAKDL +KEFK+P  KPMPC ++ EA  +CYKE     LKC+  VK+F DC R++RQQ++  EK
Subjt:  QKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEACFQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

Sequences

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CDS sequence

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ATGTCTTCTCTTTGGAACTGCTTCTTTTGTTCCTTTGGGGTGTCCACAGTTCGAAATGGAGATTGTGGTTCCATGATTGAGGAAGTGCTTCTCAACTCTCCCTTTGGCGA
TAAAGGAAAGTTTTTGTGGCAAGCTTGCTTCTTTGCTACTCTGTGGAATATTTGGCTTGAAAGGAATGGTCGTATCTTTAGAGGGATTGAGAGATCGGGGGAGGATCCTT
GTAGTCTGCCTAGGAGCATAATGGGTGATTTTTCCATTCAGATTAGTTCAAACCTTGTTGATATGCTTATCGATGATACCGAAAAACCAAAAAGAAAACCGAGAAGAAAT
AGAACCAAGGTACCTCAAGAGAGTAAAAAGGTCGATCATAAACATATATCTGATGATTCTGGAATGCTGAAGGGAAGCACAAGTGATGGATGGCCACACCAATCTCCCCC
GCTCTTCCTTCCCGTAATTCCTCCCATACATTCTGCCAATGCAGAGCTAGATGCAATCCGATCCGTCCTGCAAGAGAGTGAAAGGGTTGTGGAGAAGTTGCAGAAGCATG
AGGACAAAATGCTGCAGGAAGTCACTCAAAGGGCAAAAGACCTCCATGACAAGGAGTTCAAGCTCCCTTACCAGAAGCCTATGCCATGCTTGGCCGAAAGTGAAGCTTGC
TTTCAATGCTACAAAGAATATCCCAACGACCTCTTGAAATGTGCTCGTCTTGTAAAAAATTTTGCCGATTGTAACCGCCAAGCTCGGCAGCAAATGAGCTCGGTCGAGAA
GTAG

mRNA sequence

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Protein sequence

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MSSLWNCFFCSFGVSTVRNGDCGSMIEEVLLNSPFGDKGKFLWQACFFATLWNIWLERNGRIFRGIERSGEDPCSLPRSIMGDFSIQISSNLVDMLIDDTEKPKRKPRRN
RTKVPQESKKVDHKHISDDSGMLKGSTSDGWPHQSPPLFLPVIPPIHSANAELDAIRSVLQESERVVEKLQKHEDKMLQEVTQRAKDLHDKEFKLPYQKPMPCLAESEAC
FQCYKEYPNDLLKCARLVKNFADCNRQARQQMSSVEK

Spg015867 (gene) of Sponge gourd (cylindrica) v1 genome