; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015898 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015898
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold6:43164589..43167610
RNA-Seq ExpressionSpg015898
SyntenySpg015898
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]4.5e-3146.97Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        Q+YMSA E   SK+ E   KR+          K++R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K 
Subjt:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK   REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

XP_022152370.1 uncharacterized protein LOC111020115 [Momordica charantia]6.3e-2539.41Show/hide
Query:  DLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRM
        D +ELI  K    E+ +   ++ ++ +++ +   D         D+  R    H R RP        +E+YTPT +P  ++L  I  +    LLK P ++
Subjt:  DLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRM

Query:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREA
        +  P++R+K +YCLFHRDHGHST NC +LK +IE LIQ+ Y K+FVG+P++  A++   R R     R K+ P   I TIFGGP+GG S  KRK +AREA
Subjt:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREA

Query:  RFE
        R E
Subjt:  RFE

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]5.7e-3448.48Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K 
Subjt:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRKA  REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]5.0e-3045.73Show/hide
Query:  QKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        QKYMSAEE       L+ K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P
Subjt:  QKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP
        ++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG     S RKRKA  REAR  P
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.5e-3146.46Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK    +R K 
Subjt:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128052.2e-3146.97Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        Q+YMSA E   SK+ E   KR+          K++R+ +  +G     R R  +  P  KFEKYT T VP EQVLMEI+N  LLK+P RM +S  +R K 
Subjt:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFH DHGH+T++C  LK+E+E LI  GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRK   REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

A0A6J1DDR5 uncharacterized protein LOC1110201153.0e-2539.41Show/hide
Query:  DLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRM
        D +ELI  K    E+ +   ++ ++ +++ +   D         D+  R    H R RP        +E+YTPT +P  ++L  I  +    LLK P ++
Subjt:  DLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNT---GLLKFPGRM

Query:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREA
        +  P++R+K +YCLFHRDHGHST NC +LK +IE LIQ+ Y K+FVG+P++  A++   R R     R K+ P   I TIFGGP+GG S  KRK +AREA
Subjt:  KSSPDRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKA-EADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREA

Query:  RFE
        R E
Subjt:  RFE

A0A6J1DWY0 uncharacterized protein LOC1110252932.8e-3448.48Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK+S  +R K 
Subjt:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFHRDHGH+T++C  LK+E+E LI+ GYLKE+V EPKA           T++G   + P REIRTI GGP    S RKRKA  REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

A0A6J1DYL6 uncharacterized protein LOC1110257852.2e-3146.46Show/hide
Query:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS
        Q+YMSA E   SK+ E + KR+          K++R+ +  +G     R R  +  P  KFEKYTPT VP EQVLMEI++  LLK+P RMK    +R K 
Subjt:  QKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKS

Query:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV
        +YCLFHRDH H+T++   LK+E+E LI+ GYL+E+V EPKA           T++G  ++ P REIRTI GGP    S+RKRKA  REAR   E   V
Subjt:  QYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAV

A0A6J1DZ52 uncharacterized protein LOC1110256122.4e-3045.73Show/hide
Query:  QKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP
        QKYMSAEE       L+ K+++++ +RS      S+ +K+ R      G+ D  R          KFEKYTPT VP EQVLMEI++  LLK+P  MK+ P
Subjt:  QKYMSAEEL------LKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSP

Query:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP
        ++R K +YCLFHRDHGH+T +C  LK+E+E LI+ GYLKE+V + KA  ++            D + P REIRTI GG     S RKRKA  REAR  P
Subjt:  DRRDKSQYCLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAATTTTGGACCACTCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTGGGAAACCGACCCAGAGGAGGAACCAACCAAAGGGCCAGGCCAAC
TTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGAGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCA
CCCCGGTTTCGCCTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACA
GAAAATTCGGATGGTGACCGTTACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGC
TCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATC
CGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGAT
CGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGA
GAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCG
AGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCA
CAAGACTTGGAAGAATTGATCGATCAAAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAG
TAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACAC
CAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTAT
TGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCC
CAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAG
GAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGCCGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGAGCCGAGGC
CGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCAATTTTGGACCACTCGACGCACAAGGAGCTGACGAGGACGTCCGGGCGAAAATAGGGCTGGGAAACCGACCCAGAGGAGGAACCAACCAAAGGGCCAGGCCAAC
TTGGCCCGACCCAAATGGTCGGCCTCGGCCCAAGGCCGAGGCCGACCATTCGGCCCGCTTGAGCGGGCCGAGCTCGGTCACCTCCTCTCGGTCCCCAATGTCGCTAGCCA
CCCCGGTTTCGCCTGTTGGCGCCGTCTGTGGGGAAGAAAGCTTGCCAAATCTGCATATCGGTCATTCCATGAGTAAGGGGATGGAGAAGGGAAATCAAGACATAAACACA
GAAAATTCGGATGGTGACCGTTACCAGCGGAGGTCACGGGCTGAATCTCCTCGTCCTCGGTCTCCACTGCCCTCATCCCGAGAGAAGCAAACTGATCTCAAATTCGCTGC
TCTCGAAAACAAAGTAAGTGCGATGGATCAAAATTTGTCCAGGATACTTCGTATCTTGGATAAACCTGGTCCTAGCACTAGAACCCTTGATGAGAGGCTGGTTAGGGATC
CGAGGAAGGGGAAGGAGCCCCTGGAGCGCACTGCAGAATCGGAGACGAGATCGAAGGGAAAGAAGACTAGCAGCATGACCAGCAAGGTCAGGGGGCTCAAACCTACTGAT
CGTACGATTTTGAGGAGCCCAGAGTCAAGCACACTTAAGGGGCATGACTACACAGTTTCTACCCCAAGCTATGGTCATACTAAGACAGACCTGAGGAATCTGATCGAGGA
GAAGCGCAGAAGTGCCAAAACTGCCGAATCTGAGGCCAGGGCTGCCGAAGCTGAAGCCAGGGCTGCCGAGGCCGAGGCCAGAGCAGCCGAGGCCGAGGCTAGGTTGGCCG
AGGCCGAGGCCAAGAAGGACAATCTCCCCTGGAAGACTGAGCTTCTGAATGCACTGAAGGAGCTCGGAAATCCTCAGGGAGAACTACCCAAGTTAAAGGACTCAGGAGCA
CAAGACTTGGAAGAATTGATCGATCAAAAATACATGAGCGCAGAAGAGTTGCTCAAGTCAAAGAAATCAGAACGTGAACACAAGAGGTCTTCGACATCTGACCACGACAG
TAGGAAGGATAAAAAGCAGCGGACCGACGAGGGAGGCCGAGGCCGACCAGACCATGGCCGAGGCCGACCAGACCGAGCACATCCCTTTGGTAAATTCGAGAAATATACAC
CAACAGCTGTTCCACAGGAGCAAGTATTGATGGAGATTCGAAATACGGGACTCCTGAAATTCCCGGGAAGGATGAAGTCAAGTCCCGATAGAAGAGACAAGAGCCAGTAT
TGCCTTTTCCATCGAGACCATGGACATTCAACTAGGAATTGTATTCAGTTGAAGGATGAAATCGAAGCATTGATTCAGAATGGGTATTTGAAGGAGTTCGTCGGCGAGCC
CAAGGCCGAGGCCGACCAGGGATGGCCGAGGCCGAGGCTGACCAAGGATGGCCGAGACAAAGAAGAGCCCCTACGAGAGATCAGAACCATCTTTGGAGGACCAGCTGGAG
GAAGTTCAAGCAGGAAGAGGAAAGCTATTGCCAGGGAAGCAAGGTTCGAGCCAGAGTATCGAGCCGTTAAACCACAGAGGGCCGAGGCCGACCAGAGGATGAGCCGAGGC
CGAGCAGGACACACTTCCACCGATACTGAATCTGAACTTATGGAGTTTTAG
Protein sequenceShow/hide protein sequence
MGNFGPLDAQGADEDVRAKIGLGNRPRGGTNQRARPTWPDPNGRPRPKAEADHSARLSGPSSVTSSRSPMSLATPVSPVGAVCGEESLPNLHIGHSMSKGMEKGNQDINT
ENSDGDRYQRRSRAESPRPRSPLPSSREKQTDLKFAALENKVSAMDQNLSRILRILDKPGPSTRTLDERLVRDPRKGKEPLERTAESETRSKGKKTSSMTSKVRGLKPTD
RTILRSPESSTLKGHDYTVSTPSYGHTKTDLRNLIEEKRRSAKTAESEARAAEAEARAAEAEARAAEAEARLAEAEAKKDNLPWKTELLNALKELGNPQGELPKLKDSGA
QDLEELIDQKYMSAEELLKSKKSEREHKRSSTSDHDSRKDKKQRTDEGGRGRPDHGRGRPDRAHPFGKFEKYTPTAVPQEQVLMEIRNTGLLKFPGRMKSSPDRRDKSQY
CLFHRDHGHSTRNCIQLKDEIEALIQNGYLKEFVGEPKAEADQGWPRPRLTKDGRDKEEPLREIRTIFGGPAGGSSSRKRKAIAREARFEPEYRAVKPQRAEADQRMSRG
RAGHTSTDTESELMEF