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Spg015921 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015921
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein YABBY 4-like
Genome locationscaffold6:43840147..43841099
RNA-Seq ExpressionSpg015921
SyntenySpg015921
Gene Ontology termsGO:0009944 - polarity specification of adaxial/abaxial axis (biological process)
GO:0010154 - fruit development (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:1902183 - regulation of shoot apical meristem development (biological process)
GO:2000024 - regulation of leaf development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR006780 - YABBY protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19491.1 protein YABBY 4-like [Cucumis melo var. makuwa]3.9e-5680.28Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSSLPTTFSQLPP       PSDQLCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPV+M GGMLLPS +QFH F HSTTFFSPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII
        S  NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INRREII
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII

XP_004150647.1 protein YABBY 4 isoform X2 [Cucumis sativus]6.2e-5479.71Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSS PTTFSQLPPP      PSDQLCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPVNM GGMLLPS +QFH F HSTTF SPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        S  NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INR
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

XP_008448889.1 PREDICTED: protein YABBY 4-like [Cucumis melo]4.7e-5479.71Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSSLPTTFSQLPP       PSDQLCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPV+M GGMLLPS +QFH F HSTTFFSPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        S  NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INR
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

XP_038876835.1 protein YABBY 4-like isoform X1 [Benincasa hispida]3.0e-5681.88Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSS PTTFSQL     PPPSPSD++CYVHC+IC+TILAVSVPS SLFK VTVRCG+CANLLPVNM GGM LPS+NQFH FAHST FFSPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        S  NPNPNFL NQT+GIDLTMATRVAND+PRQPPSINR
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

XP_038876836.1 protein YABBY 4-like isoform X2 [Benincasa hispida]3.0e-5681.88Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSS PTTFSQL     PPPSPSD++CYVHC+IC+TILAVSVPS SLFK VTVRCG+CANLLPVNM GGM LPS+NQFH FAHST FFSPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        S  NPNPNFL NQT+GIDLTMATRVAND+PRQPPSINR
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

TrEMBL top hitse value%identityAlignment
A0A0A0L1N8 Uncharacterized protein3.0e-5479.71Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSS PTTFSQLPPP      PSDQLCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPVNM GGMLLPS +QFH F HSTTF SPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        S  NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INR
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

A0A1S4DXY3 protein YABBY 4-like2.3e-5479.71Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSSLPTTFSQLPP       PSDQLCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPV+M GGMLLPS +QFH F HSTTFFSPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        S  NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INR
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

A0A5D3D7E7 Protein YABBY 4-like1.9e-5680.28Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MSSSSLPTTFSQLPP       PSDQLCYVHC+IC+T+LAVSVPS SLFK VTVRCG+CANLLPV+M GGMLLPS +QFH F HSTTFFSPN HNF+EEI
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII
        S  NPNPNFL NQT+GIDLTMATRV ND+PRQPP+INRREII
Subjt:  SNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINRREII

A0A6J1KXR1 protein YABBY 4-like isoform X22.6e-5077.7Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTT-FFSPNAHNFMEE
        MSS SLPTTFSQ PP   PPPS SD LCYVHC+IC+T+LAVSVP ASLFKTVTVRCGHCANLLPVNM GGMLLPS N FH+F  S+T FF+PNAHNF+EE
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTT-FFSPNAHNFMEE

Query:  ISNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        IS  NPNPNF  NQTDGIDLTM TRV ND+PR P +INR
Subjt:  ISNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

A0A6J1KZK7 protein YABBY 4-like isoform X12.6e-5077.7Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTT-FFSPNAHNFMEE
        MSS SLPTTFSQ PP   PPPS SD LCYVHC+IC+T+LAVSVP ASLFKTVTVRCGHCANLLPVNM GGMLLPS N FH+F  S+T FF+PNAHNF+EE
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTT-FFSPNAHNFMEE

Query:  ISNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR
        IS  NPNPNF  NQTDGIDLTM TRV ND+PR P +INR
Subjt:  ISNPNPNPNFLFNQTDGIDLTMATRVANDIPRQPPSINR

SwissProt top hitse value%identityAlignment
A2X7Q3 Protein YABBY 41.6e-1745.74Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPS-----TNQFHSFAHSTTFFSPNA-H
        MSSSS  ++ +  P      PSP++QLCYVHC+ C+TILAV VP +SLFKTVTVRCGHCANLL VN+  G+LLP+      NQ H      +  SP + H
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPS-----TNQFHSFAHSTTFFSPNA-H

Query:  NFMEEISNPNPNPNFLFNQTDGIDLTMAT
          ++E++     P+ L  Q     L+  T
Subjt:  NFMEEISNPNPNPNFLFNQTDGIDLTMAT

O22152 Axial regulator YABBY 13.1e-1642.96Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MS SS+ +  S +  P     SPSD LCYV C+ C TILAV+VP  SLFKTVTVRCG C NLL VNM    +LP++NQ        ++F+P   + +EE+
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPN-FLFNQ---TDGIDLTMATRVANDIPRQPPSINR
         +   N N  + NQ    + I   M     ++IP+ PP +NR
Subjt:  SNPNPNPN-FLFNQ---TDGIDLTMATRVANDIPRQPPSINR

Q01JG2 Protein YABBY 58.2e-1747.57Show/hide
Query:  SSLPTTF-----SQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNA-HNFM
        SS P TF     SQ      PP +  +QLCYVHC+ C+TILAV VP +SLFKTVTVRCGHCANLL VN+ G +L  + +  +         SP + H  +
Subjt:  SSLPTTF-----SQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNA-HNFM

Query:  EEI
        +E+
Subjt:  EEI

Q0JBF0 Protein YABBY 58.2e-1747.57Show/hide
Query:  SSLPTTF-----SQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNA-HNFM
        SS P TF     SQ      PP +  +QLCYVHC+ C+TILAV VP +SLFKTVTVRCGHCANLL VN+ G +L  + +  +         SP + H  +
Subjt:  SSLPTTF-----SQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNA-HNFM

Query:  EEI
        +E+
Subjt:  EEI

Q6H668 Protein YABBY 41.6e-1745.74Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPS-----TNQFHSFAHSTTFFSPNA-H
        MSSSS  ++ +  P      PSP++QLCYVHC+ C+TILAV VP +SLFKTVTVRCGHCANLL VN+  G+LLP+      NQ H      +  SP + H
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPS-----TNQFHSFAHSTTFFSPNA-H

Query:  NFMEEISNPNPNPNFLFNQTDGIDLTMAT
          ++E++     P+ L  Q     L+  T
Subjt:  NFMEEISNPNPNPNFLFNQTDGIDLTMAT

Arabidopsis top hitse value%identityAlignment
AT1G08465.1 Plant-specific transcription factor YABBY family protein4.3e-1370.45Show/hide
Query:  SDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNM
        S+++CYVHC  C TILAVSVP ASLF  VTVRCGHC NLL +N+
Subjt:  SDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNM

AT2G26580.1 plant-specific transcription factor YABBY family protein4.8e-1253.45Show/hide
Query:  SDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHS
        ++QLCY+ C+ CN ILAV+VP +SLF  VTVRCGHC NL  VNM   +   S   F +
Subjt:  SDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHS

AT2G26580.2 plant-specific transcription factor YABBY family protein4.8e-1253.45Show/hide
Query:  SDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHS
        ++QLCY+ C+ CN ILAV+VP +SLF  VTVRCGHC NL  VNM   +   S   F +
Subjt:  SDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHS

AT2G45190.1 Plant-specific transcription factor YABBY family protein2.2e-1742.96Show/hide
Query:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI
        MS SS+ +  S +  P     SPSD LCYV C+ C TILAV+VP  SLFKTVTVRCG C NLL VNM    +LP++NQ        ++F+P   + +EE+
Subjt:  MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEI

Query:  SNPNPNPN-FLFNQ---TDGIDLTMATRVANDIPRQPPSINR
         +   N N  + NQ    + I   M     ++IP+ PP +NR
Subjt:  SNPNPNPN-FLFNQ---TDGIDLTMATRVANDIPRQPPSINR

AT4G00180.1 Plant-specific transcription factor YABBY family protein2.2e-1742.86Show/hide
Query:  SSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMH-GGMLLPS-TNQFHSFAHSTTFFSPNAHNFMEEI-
        SS+  + S  P  P    S +DQLCYVHC  C+T+LAVSVP +SLFKTVTVRCGHC+NLL V +    +LLPS +N  HSF        P   N +EE+ 
Subjt:  SSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMH-GGMLLPS-TNQFHSFAHSTTFFSPNAHNFMEEI-

Query:  -SNPNPNPNFLFNQTDGI-----DLTMATRVA------NDIPRQPPS
            N N N + +           L MATR         ++PR PP+
Subjt:  -SNPNPNPNFLFNQTDGI-----DLTMATRVA------NDIPRQPPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATCTTCTTCCCTTCCCACCACCTTCTCCCAACTTCCTCCTCCTCCTTCTCCTCCTCCTTCTCCTTCCGATCAGCTTTGTTATGTCCATTGCGACATTTGCAACAC
CATCCTAGCGGTGAGTGTTCCTTCTGCTAGTTTGTTCAAAACGGTCACCGTCCGTTGCGGCCACTGCGCCAACCTTCTACCGGTGAACATGCATGGTGGCATGCTTCTCC
CTTCTACAAATCAATTTCACAGCTTTGCTCACTCGACCACTTTCTTCTCACCCAATGCTCACAATTTCATGGAAGAGATCTCAAATCCAAATCCAAATCCAAATTTTCTG
TTCAATCAAACAGATGGAATTGATTTGACCATGGCGACTCGAGTAGCCAACGATATTCCAAGGCAACCCCCAAGCATAAATAGACGTGAGATAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATCTTCTTCCCTTCCCACCACCTTCTCCCAACTTCCTCCTCCTCCTTCTCCTCCTCCTTCTCCTTCCGATCAGCTTTGTTATGTCCATTGCGACATTTGCAACAC
CATCCTAGCGGTGAGTGTTCCTTCTGCTAGTTTGTTCAAAACGGTCACCGTCCGTTGCGGCCACTGCGCCAACCTTCTACCGGTGAACATGCATGGTGGCATGCTTCTCC
CTTCTACAAATCAATTTCACAGCTTTGCTCACTCGACCACTTTCTTCTCACCCAATGCTCACAATTTCATGGAAGAGATCTCAAATCCAAATCCAAATCCAAATTTTCTG
TTCAATCAAACAGATGGAATTGATTTGACCATGGCGACTCGAGTAGCCAACGATATTCCAAGGCAACCCCCAAGCATAAATAGACGTGAGATAATTTAA
Protein sequenceShow/hide protein sequence
MSSSSLPTTFSQLPPPPSPPPSPSDQLCYVHCDICNTILAVSVPSASLFKTVTVRCGHCANLLPVNMHGGMLLPSTNQFHSFAHSTTFFSPNAHNFMEEISNPNPNPNFL
FNQTDGIDLTMATRVANDIPRQPPSINRREII