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Spg015938 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015938
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold6:40155385..40157253
RNA-Seq ExpressionSpg015938
SyntenySpg015938
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]5.8e-2659.32Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+S+P +RKGLGYKSPEP+RIT++GK KV DINHIT+EE D++  KE  NQR SVF RIRP VAR  VF+R+ + E E E  Q   S  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEEST
        R  VFRRL+    KEEST
Subjt:  RSLVFRRLSMFIGKEEST

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]1.1e-0837.86Show/hide
Query:  IEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGEALEIVTCHIVDVVEDD
        IE+++EGW +VT RKK++    ++ESR +++ +R  K+Q+ K KK + + K V  E  +F  P + +TLA++ P+ FL D Q E  E+V CH ++  E++
Subjt:  IEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGEALEIVTCHIVDVVEDD

Query:  DVP
         +P
Subjt:  DVP

XP_031735972.1 uncharacterized protein LOC116401693 [Cucumis sativus]5.8e-2659.32Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+S+P +RKGLGYKSPEP+RIT++GK KV DINHIT+EE D++  KE  NQR SVF RIRP VAR  VF+R+ + E E E  Q   S  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEEST
        R  VFRRL+    KEEST
Subjt:  RSLVFRRLSMFIGKEEST

XP_031737045.1 uncharacterized protein LOC116402134 [Cucumis sativus]1.3e-2558.47Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+S+P +RKGLGYKSPEP+RIT++GK KV DINHIT+EE D++  KE  NQR SVF RIRP VAR  VF+R+ + E E E  Q   +  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEEST
        R  VFRRL+    KEEST
Subjt:  RSLVFRRLSMFIGKEEST

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.3e-2558.47Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+S+P +RKGLGYKSPEP+RIT++GK KV DINHIT+EE D++  KE  NQR SVF RIRP VAR  VF+R+ + E E E  Q   +  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEEST
        R  VFRRL+    KEEST
Subjt:  RSLVFRRLSMFIGKEEST

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.1e-0837.86Show/hide
Query:  IEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGEALEIVTCHIVDVVEDD
        IE+++EGW +VT RKK++    ++ESR +++ +R  K+Q+ K KK + + K V  E  +F  P + +TLA++ P+ FL D Q E  E+V CH ++  E++
Subjt:  IEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGEALEIVTCHIVDVVEDD

Query:  DVP
         +P
Subjt:  DVP

XP_031739134.1 uncharacterized protein LOC116402863 [Cucumis sativus]1.3e-2558.47Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+S+P +RKGLGYKSPEP+RIT++GK KV DINHIT+EE D++  KE  NQR SVF RIRP VAR  VF+R+ + E E E  Q   +  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEEST
        R  VFRRL+    KEEST
Subjt:  RSLVFRRLSMFIGKEEST

XP_031742032.1 uncharacterized protein LOC116404025 [Cucumis sativus]1.1e-0837.86Show/hide
Query:  IEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGEALEIVTCHIVDVVEDD
        IE+++EGW +VT RKK++    ++ESR +++ +R  K+Q+ K KK + + K V  E  +F  P + +TLA++ P+ FL D Q E  E+V CH ++  E++
Subjt:  IEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGEALEIVTCHIVDVVEDD

Query:  DVP
         +P
Subjt:  DVP

TrEMBL top hitse value%identityAlignment
A0A5A7SPV8 Ribonuclease H6.9e-2554.92Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+++P +RKGLGYKSPEP+RITR+GK KV D NHITV+EVD   EKE  +QRTS F RI P VARA VF+R+ V E E +  Q T++  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEESTLSTP
        R   F RLS+   K   T   P
Subjt:  RSLVFRRLSMFIGKEESTLSTP

A0A5A7TJZ7 Retrotransposon gag protein1.5e-2455.17Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+++P +RKGLGYKSPEP+RITR+GK KV D NHITV+EVD  +EKE   QRTS F RI P VAR  VF+R+ + E E +  Q T++  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEE
        R   F+RL+M   KE+
Subjt:  RSLVFRRLSMFIGKEE

A0A5A7TJZ7 Retrotransposon gag protein3.1e-0144.83Show/hide
Query:  SQEKYDSIEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSK
        S+EK  SIE+++EGW +VTRRKK++ +  +KESR +R+ +R  K+++ K KK +++ K
Subjt:  SQEKYDSIEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSK

A0A5A7TJZ7 Retrotransposon gag protein2.0e-2452Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D NHITV+EVD   EKE  NQRTS F RI P VARA VF+R+ + E E +  Q T++  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEESTLSTPDVT
        +   F+RL++   +E+    T   T
Subjt:  RSLVFRRLSMFIGKEESTLSTPDVT

A0A5A7UMY2 Reverse transcriptase domain-containing protein2.6e-2452Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+ +P +RKGLGYKSPEP+RITR+GK KV D NHITV+EVD   EKE  NQRTS F RI P VARA VF+R+ + E + +  Q T++  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEESTLSTPDVT
        R   F+RL++   +E+    T   T
Subjt:  RSLVFRRLSMFIGKEESTLSTPDVT

A0A5D3BY54 Ty3-gypsy retrotransposon protein3.4e-2453.78Show/hide
Query:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST
        L   +KKLL+EG+++P +RKGLGYK PEP+RITR+GK KV D NHITV+EVD   EKE  +QRTS F R+ P VARA VF+R+ + E E +  Q T+S  
Subjt:  LVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNETEEESAQPTNSST

Query:  RSLVFRRLSMFIGKEESTL
        R   F+RL+M    E+ +L
Subjt:  RSLVFRRLSMFIGKEESTL

A0A5D3BY54 Ty3-gypsy retrotransposon protein1.4e-0947.25Show/hide
Query:  SQEKYDSIEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGE
        SQEK   IE+++EGWT+VTRRKK++ +  +KESRL+ + +R  K+Q+ K KK +R+ K V E+ +DF    + +TLA++FP  FL D Q E
Subjt:  SQEKYDSIEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCACTCGTCGCAAAAAGCAAAGGCAAAGTTACGCACGAAAAGAGTCCCG
TCTGTTTCGAGACAGTAAAAGAAAGGTTAAATCTCAAAGAAAGAAGGGAAAAAAGAATTCAAGGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCTCTTTCTCGATGATAGTCAAGGAGAAGCACTTGAAATCGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGTTACTGTTGAAGATGTGAAGGCATCTGACCTGAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAGAAGAAGCTTCTAAAAGAAGGTTATAGTCT
GCCTACAACGAGAAAAGGACTTGGATATAAGTCGCCCGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTG
ATGACTCAAGAGAAAAAGAGAGCATTAACCAACGAACTTCTGTTTTTAGGCGCATTAGGCCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGATAATTGTGAATGAAACA
GAAGAAGAAAGTGCACAACCTACCAATAGCTCCACTCGATCTTTAGTTTTTCGAAGGTTAAGTATGTTCATTGGAAAAGAAGAGAGTACACTTTCAACTCCGGATGTCAC
GTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGGATCCCAAGAAAAATATGATTCCATCGAAGATGAGAACGAAGGTTGGACCCTTGTCACTCGTCGCAAAAAGCAAAGGCAAAGTTACGCACGAAAAGAGTCCCG
TCTGTTTCGAGACAGTAAAAGAAAGGTTAAATCTCAAAGAAAGAAGGGAAAAAAGAATTCAAGGAGGTCAAAGCCTGTCGTGGAGGAAAGTGAAGATTTCTTTTGCCCTC
CACAACCCATAACTTTGGCAGAATACTTCCCAAGGCTCTTTCTCGATGATAGTCAAGGAGAAGCACTTGAAATCGTCACGTGTCACATTGTGGACGTGGTGGAAGATGAT
GATGTCCCTGTTACTGTTGAAGATGTGAAGGCATCTGACCTGAAAAAGGGTGAAACATCTACAAGCCTTGTGAAACCTAAGAAGAAGCTTCTAAAAGAAGGTTATAGTCT
GCCTACAACGAGAAAAGGACTTGGATATAAGTCGCCCGAGCCGGTTCGCATAACAAGAAGAGGGAAGGCGAAAGTGGCAGACATAAATCATATAACAGTAGAGGAGGTTG
ATGACTCAAGAGAAAAAGAGAGCATTAACCAACGAACTTCTGTTTTTAGGCGCATTAGGCCACCAGTTGCTCGTGCTTCAGTCTTTCAGAGGATAATTGTGAATGAAACA
GAAGAAGAAAGTGCACAACCTACCAATAGCTCCACTCGATCTTTAGTTTTTCGAAGGTTAAGTATGTTCATTGGAAAAGAAGAGAGTACACTTTCAACTCCGGATGTCAC
GTGA
Protein sequenceShow/hide protein sequence
MKGSQEKYDSIEDENEGWTLVTRRKKQRQSYARKESRLFRDSKRKVKSQRKKGKKNSRRSKPVVEESEDFFCPPQPITLAEYFPRLFLDDSQGEALEIVTCHIVDVVEDD
DVPVTVEDVKASDLKKGETSTSLVKPKKKLLKEGYSLPTTRKGLGYKSPEPVRITRRGKAKVADINHITVEEVDDSREKESINQRTSVFRRIRPPVARASVFQRIIVNET
EEESAQPTNSSTRSLVFRRLSMFIGKEESTLSTPDVT