; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg015948 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg015948
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
Genome locationscaffold6:39798006..39805128
RNA-Seq ExpressionSpg015948
SyntenySpg015948
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR021099 - Plant organelle RNA recognition domain
IPR045040 - PORR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578890.1 Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.2e-11469.75Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L+K R+W+PRLSSPY+ K FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+L CPNQTAPVKFLQKKFKTLD QGKALNWLKKYP CFEVYLH+D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        EYYFRLTKRMMALVEEEET+KDMQEP FVERLAKLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+FHE NASP   PY N  GLV+ TKE EKRTVGLIHEILSLTLW+KASIMKLGHFSREFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

KAG7016419.1 Vacuolar iron transporter-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-11369.43Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        + +K R+W+PRLSSPY+ K FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+L CPNQTAPVKFLQKKFKTLD QGKALNWLKKYP CFEVYLH+D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        EYYFRLTKRMMALVEEEET+KDMQEP FVERLAKLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+FHE NASP   PY N  GLV+ TKE EKRTVGLIHEILSLTLW+KASIMKLGHFSREFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

XP_022939501.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata]7.2e-11469.75Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L K R+W+PRLSSPY+ K FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+L CPNQTAPVKFLQKKFKTLD QGKALNWLKKYP CFEVYLH+D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        EYYFRLTKRMMALVEEEET+KDMQEP FVERLAKLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+FHE NASP   PY N  GLV+ TKE EKRTVGLIHEILSLTLW+KASIMKLGHFSREFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

XP_022993888.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucurbita maxima]9.5e-11470.06Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L+K R+W+PRLSSPY+ K FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+L CPNQTAPVKFLQKKFKTLD QGKALNWLKKYP CFEVYLHDD
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        EYYFRLTKRMMALVEEEETVKDMQEP FVERLAKLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+FHE NASP   PY    GLV+ TKE EKRTVGLIHEILSLTLW+KASIMKLGHFSREFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

XP_038886354.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida]3.3e-11469.43Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L+KLRYW+PR SSPY  KYFLRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIIL CP+Q  PVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLH+D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        E YFRLTKRMMALVEEEE VKDMQEP+ V+RLAKLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+FHE NASP   PY NP GLVQGTKE EKR VGLIHEILSLTLW+KASI+KLGHFSREFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

TrEMBL top hitse value%identityAlignment
A0A1S4DTX7 LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 11.1e-11067.83Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L+K RYW+P LSSP   KY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIIL CP+Q APVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL++D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        E+YFRLTKRMMALVEEEE VKDMQEP  V+RL KLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+F+E NASP   PYVNP GLVQGT+E EKRTVGLIHEILSLTLW+KASI+KLGHFS+EFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

A0A5D3DGZ3 Protein ROOT PRIMORDIUM DEFECTIVE 11.1e-11067.83Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L+K RYW+P LSSP   KY LRNFSLWSMKKDPDLESALSRNRRWI NNQIKNIIL CP+Q APVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL++D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        E+YFRLTKRMMALVEEEE VKDMQEP  V+RL KLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+F+E NASP   PYVNP GLVQGT+E EKRTVGLIHEILSLTLW+KASI+KLGHFS+EFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

A0A6J1C186 protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X12.8e-11167.83Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L+K RYWNP LSS  A KY LRNFSLWSMKK+PDLESALSRNRRWIVNNQIKNI+L  PNQ APVKFLQK+FKTLDLQGKALNWLKKYPCCFEVYL +D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        EYYFRLTKRMMALVEEE  +KDMQEP+FVERLAKLLMMASN+RLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTW+NSWE+FHE NASP   PYVNPR LVQG+KE EKRTVGLIHEILSLTLW+KASIMKL HFSREFG+PAKLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFY+SNKYQIYT
Subjt:  PGIFYVSNKYQIYT

A0A6J1FG34 protein WHAT'S THIS FACTOR 1 homolog3.5e-11469.75Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L K R+W+PRLSSPY+ K FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+L CPNQTAPVKFLQKKFKTLD QGKALNWLKKYP CFEVYLH+D
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        EYYFRLTKRMMALVEEEET+KDMQEP FVERLAKLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+FHE NASP   PY N  GLV+ TKE EKRTVGLIHEILSLTLW+KASIMKLGHFSREFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

A0A6J1K3L2 protein ROOT PRIMORDIUM DEFECTIVE 14.6e-11470.06Show/hide
Query:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD
        +L+K R+W+PRLSSPY+ K FLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNI+L CPNQTAPVKFLQKKFKTLD QGKALNWLKKYP CFEVYLHDD
Subjt:  MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDD

Query:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------
        EYYFRLTKRMMALVEEEETVKDMQEP FVERLAKLLMMASNQRLNV                                                      
Subjt:  EYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV------------------------------------------------------

Query:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH
                    PAFSCSLPTTWVNSWE+FHE NASP   PY    GLV+ TKE EKRTVGLIHEILSLTLW+KASIMKLGHFSREFGLP KLN LLLKH
Subjt:  ------------PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKH

Query:  PGIFYVSNKYQIYT
        PGIFYVSNKYQIYT
Subjt:  PGIFYVSNKYQIYT

SwissProt top hitse value%identityAlignment
A0MFS5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic2.9e-0939.74Show/hide
Query:  RFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK
        +F ++    PY +   L  GT E+EK   G+IHE+LSLT  ++  +  L HF  EF    +L  +L++HP +FYVS K
Subjt:  RFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK

B6TTV8 Protein WHAT'S THIS FACTOR 1, chloroplastic1.7e-0931.78Show/hide
Query:  LVEEEETVKDMQE-PIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSWERFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKL
        L EEE   ++ +E  + ++R  K        R+ +P     L         RF E+    PY +   L  G+ E+EK   G++HEILSLT+ ++  +  L
Subjt:  LVEEEETVKDMQE-PIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSWERFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKL

Query:  GHFSREFGLPAKLNTLLLKHPGIFYVSNK
         HF  EF     L  ++++HP +FYVS K
Subjt:  GHFSREFGLPAKLNTLLLKHPGIFYVSNK

Q65XL5 Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic2.9e-0932.56Show/hide
Query:  LVEEEETVKDMQE-PIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSWERFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKL
        + EEE   ++ QE  + ++R  K        R+ +P     L         +F E+    PY +   L  G+ E+EK   G++HEILSLTL ++  +  L
Subjt:  LVEEEETVKDMQE-PIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSWERFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKL

Query:  GHFSREFGLPAKLNTLLLKHPGIFYVSNK
         HF  EF     L  +L++HP +FYVS K
Subjt:  GHFSREFGLPAKLNTLLLKHPGIFYVSNK

Q689D6 Protein ROOT PRIMORDIUM DEFECTIVE 11.2e-0748.15Show/hide
Query:  EKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK
        EKR+V  IHE+LSLT+ +K ++ ++ HF     LP KL   LL+H GIFY+S +
Subjt:  EKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK

Q9ZUZ6 Protein WHAT'S THIS FACTOR 9, mitochondrial3.1e-0624.55Show/hide
Query:  MKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQ----GKALNWLKKYPCCFEVYLHDDEYYFRLTKRMMALVEEEETVKDMQE
        M KD  L  ++ +  +W +        LP      P   L   F+ +D++    G A++           Y   D+    L K  M     E ++++++ 
Subjt:  MKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQ----GKALNWLKKYPCCFEVYLHDDEYYFRLTKRMMALVEEEETVKDMQE

Query:  PIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSWERFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLN
        P+F                  P+  C L     +    F +L    PY +   L   +   EKR VG +HE+L L +   A   KL    + FGLP K++
Subjt:  PIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSWERFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLN

Query:  TLLLKHPGIFYVSNKYQIYT
            +HP IFY+S K +  T
Subjt:  TLLLKHPGIFYVSNKYQIYT

Arabidopsis top hitse value%identityAlignment
AT2G31290.1 Ubiquitin carboxyl-terminal hydrolase family protein3.0e-8956.44Show/hide
Query:  LSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDDEYYFRLTKRMM
        L + YA    +R FSLWS KKDPDLESALSRN+RWIVN+++KNIIL CPNQ A +KFLQKKFKTLDLQGKALNWLKKYPCCF VYL +DEYY RLTK MM
Subjt:  LSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDDEYYFRLTKRMM

Query:  ALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV-----------------------------------------------------------------
         LVEEEE VKD QEP+  +RLAKLLM++ NQRLNV                                                                 
Subjt:  ALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV-----------------------------------------------------------------

Query:  -PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNKYQ
         P+FSCSLP+TW   WERF E NA P   PY +   LV+G+KE EKR+VGL+HE+LSLTLW+K SI+KL HF REFGLP KLN +LLKHPGIFYV NKYQ
Subjt:  -PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNKYQ

Query:  IYT
        ++T
Subjt:  IYT

AT2G31290.2 Ubiquitin carboxyl-terminal hydrolase family protein3.0e-8956.44Show/hide
Query:  LSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDDEYYFRLTKRMM
        L + YA    +R FSLWS KKDPDLESALSRN+RWIVN+++KNIIL CPNQ A +KFLQKKFKTLDLQGKALNWLKKYPCCF VYL +DEYY RLTK MM
Subjt:  LSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDDEYYFRLTKRMM

Query:  ALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV-----------------------------------------------------------------
         LVEEEE VKD QEP+  +RLAKLLM++ NQRLNV                                                                 
Subjt:  ALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNV-----------------------------------------------------------------

Query:  -PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNKYQ
         P+FSCSLP+TW   WERF E NA P   PY +   LV+G+KE EKR+VGL+HE+LSLTLW+K SI+KL HF REFGLP KLN +LLKHPGIFYV NKYQ
Subjt:  -PAFSCSLPTTWVNSWERFHELNASP---PYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNKYQ

Query:  IYT
        ++T
Subjt:  IYT

AT3G63090.1 Ubiquitin carboxyl-terminal hydrolase family protein1.2e-2125.08Show/hide
Query:  KKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL------HDDEYYFRLTKRMMALVEEEETVKDMQ
        KKD  L+ A+ +++R+ +  ++   +L  P Q  P+++L+K+ + L L  KA ++++  P  FE+Y        D   + R T R+ A ++EE+ +    
Subjt:  KKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYL------HDDEYYFRLTKRMMALVEEEETVKDMQ

Query:  EPIFVERLAKLLMMASNQRLNV-----------------------------------------------------------------------PAFSCSL
        EP+ V +L +LLMMA ++ ++                                                                        P ++  L
Subjt:  EPIFVERLAKLLMMASNQRLNV-----------------------------------------------------------------------PAFSCSL

Query:  PTTW-----VNSWER-FHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK-------
        P+ +     +  W R + E +   PY +   L Q +KE EKRTVG++HE+LSL+L ++  +  LG F  EF      +++  +H GIFY+S K       
Subjt:  PTTW-----VNSWER-FHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK-------

Query:  -YQIYTDDESLRRWKEQLLAVVD
          + Y DDE + R  + LLA+ D
Subjt:  -YQIYTDDESLRRWKEQLLAVVD

AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein1.4e-1431.12Show/hide
Query:  LNWLKKYPCCFEVY-LHDDEYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSW------ERFHELNASPPYVN
        +NW+  +P  F+V  L D E Y  L     A    E   K +      E    +L +         AF    P ++   +      E F + +   PY +
Subjt:  LNWLKKYPCCFEVY-LHDDEYYFRLTKRMMALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSW------ERFHELNASPPYVN

Query:  PRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK--------YQIYTDDESLRR-----WKEQLL
         RGL  G+KE +KR + ++HE+LS TL ++     L HF REF +P KL  + LKH GIFYVS +         + Y   E + +     WKE+LL
Subjt:  PRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIFYVSNK--------YQIYTDDESLRR-----WKEQLL

AT5G45790.1 Ubiquitin carboxyl-terminal hydrolase family protein3.8e-1236.19Show/hide
Query:  AFSCSLPTTW---------VNSWERFHELNASPPYVNP---RGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIF
        AF   LPT +         + +W+R        PYV P   + + +G +  EKR V +IHE+LSLT+ +   + +L HF ++ G+   +  ++LKHPGIF
Subjt:  AFSCSLPTTW---------VNSWERFHELNASPPYVNP---RGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGLPAKLNTLLLKHPGIF

Query:  YVSNK
        YVS K
Subjt:  YVSNK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAGAAGCTTAGGTATTGGAATCCTAGGCTCTCATCTCCTTATGCCTTCAAATACTTCCTTAGGAATTTTTCTCTATGGTCAATGAAGAAAGACCCCGACCTTGA
ATCAGCTCTATCTCGTAACCGTCGATGGATTGTCAATAACCAAATAAAAAATATCATCCTTCCTTGTCCTAATCAGACAGCACCAGTAAAGTTTCTCCAGAAGAAGTTTA
AAACCCTTGACCTTCAAGGAAAAGCCCTTAACTGGCTGAAAAAGTATCCTTGCTGCTTTGAAGTTTATCTCCACGATGATGAGTACTACTTTCGGCTGACAAAGAGGATG
ATGGCTTTGGTTGAGGAGGAAGAAACTGTCAAAGATATGCAGGAGCCCATTTTTGTTGAGCGATTGGCTAAGTTGCTGATGATGGCTTCAAATCAGAGACTAAATGTTCC
AGCTTTCTCCTGCTCACTGCCAACAACTTGGGTAAATTCATGGGAAAGGTTTCATGAATTGAATGCCTCTCCACCGTATGTAAACCCCAGAGGCTTGGTGCAAGGTACAA
AGGAGAGGGAAAAGAGGACAGTGGGGTTGATTCATGAGATATTGTCGTTGACTTTATGGGAAAAAGCATCAATTATGAAACTTGGCCATTTCAGCAGGGAATTCGGTCTG
CCAGCGAAATTGAACACATTGCTGCTTAAGCACCCTGGCATATTCTATGTCTCAAACAAGTATCAGATTTACACTGATGATGAGAGTCTGAGGAGGTGGAAGGAACAGCT
TCTTGCGGTTGTGGATTTAGAAAATGCTGGAGGTATCTGCAGCCATATATTTCCCCTTTGTCCAAAGGGAAAGTTGTTGTTACTGGATTCAAATGTTGTTTCTTACTCTT
TGTTGTTGGTTTTTAGTTTATGCTTTCTGCTCAATGAATTTGGTTCTTCTGTACGTGATGACACTTATGCTTTGAAGAAGGTACTGATTCAGAGCAGTGAACCATTGGAG
CTGGTAGTGGCTGAGATGTTTTTGCTATGTCTGCTGAGTAAGATTTTAAATGCTGTAAGTTGTGCATTTGCTCTAAATGATACTGAAACTTTGAAGAAATACTATGGAGT
TGAAGTGAATTCATCACAATTCGGCTCCCACAAGCCCGTTCTAAGGCCGGAGAATAGCACGAAAGATCTCGGTGGTCGTCCACAACGTATTCGTGTTGAGAATCATCCAA
CGAAATGCTTGGAATCGAGCTACAAAAATAAGGCTAGATTTCCTTATCCTGGGGACACTATGGATGCGACCTACTTTGCACGTAAGGCAAACAATGTGATCCTGAATCGT
TCATGTAAAGACATGCGAGTGGGGGCATCTTGTGCAATGAGATTATCCTTTGATTTACACGGGCCGACAACAAATCCGGCCTATACCAATGGGCTGATTACATCCTTGAA
ATCGGCTTTCTTCCCCAGCCCATCAAAATTGAAGCTCTCCGCAAATGGGAATGGCCTCAACCTCATCATTCCAGAGCCATTGATTTTGGAAGCCCAAAGGCGCCATCGAC
GACCATTGCTGTCAGGGCACAGAAACCAACGCTCTGGTCTATTCGATCATCTTGATAAGTTTTTCCAATTTTCACCATTTCTAAAATTCTACGCCATGGGGCGGCTTAAA
TTGACTAACCCTCTGTGTTCGTCTCCCCAATTGGATGGTTTCGTGCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAGAAGCTTAGGTATTGGAATCCTAGGCTCTCATCTCCTTATGCCTTCAAATACTTCCTTAGGAATTTTTCTCTATGGTCAATGAAGAAAGACCCCGACCTTGA
ATCAGCTCTATCTCGTAACCGTCGATGGATTGTCAATAACCAAATAAAAAATATCATCCTTCCTTGTCCTAATCAGACAGCACCAGTAAAGTTTCTCCAGAAGAAGTTTA
AAACCCTTGACCTTCAAGGAAAAGCCCTTAACTGGCTGAAAAAGTATCCTTGCTGCTTTGAAGTTTATCTCCACGATGATGAGTACTACTTTCGGCTGACAAAGAGGATG
ATGGCTTTGGTTGAGGAGGAAGAAACTGTCAAAGATATGCAGGAGCCCATTTTTGTTGAGCGATTGGCTAAGTTGCTGATGATGGCTTCAAATCAGAGACTAAATGTTCC
AGCTTTCTCCTGCTCACTGCCAACAACTTGGGTAAATTCATGGGAAAGGTTTCATGAATTGAATGCCTCTCCACCGTATGTAAACCCCAGAGGCTTGGTGCAAGGTACAA
AGGAGAGGGAAAAGAGGACAGTGGGGTTGATTCATGAGATATTGTCGTTGACTTTATGGGAAAAAGCATCAATTATGAAACTTGGCCATTTCAGCAGGGAATTCGGTCTG
CCAGCGAAATTGAACACATTGCTGCTTAAGCACCCTGGCATATTCTATGTCTCAAACAAGTATCAGATTTACACTGATGATGAGAGTCTGAGGAGGTGGAAGGAACAGCT
TCTTGCGGTTGTGGATTTAGAAAATGCTGGAGGTATCTGCAGCCATATATTTCCCCTTTGTCCAAAGGGAAAGTTGTTGTTACTGGATTCAAATGTTGTTTCTTACTCTT
TGTTGTTGGTTTTTAGTTTATGCTTTCTGCTCAATGAATTTGGTTCTTCTGTACGTGATGACACTTATGCTTTGAAGAAGGTACTGATTCAGAGCAGTGAACCATTGGAG
CTGGTAGTGGCTGAGATGTTTTTGCTATGTCTGCTGAGTAAGATTTTAAATGCTGTAAGTTGTGCATTTGCTCTAAATGATACTGAAACTTTGAAGAAATACTATGGAGT
TGAAGTGAATTCATCACAATTCGGCTCCCACAAGCCCGTTCTAAGGCCGGAGAATAGCACGAAAGATCTCGGTGGTCGTCCACAACGTATTCGTGTTGAGAATCATCCAA
CGAAATGCTTGGAATCGAGCTACAAAAATAAGGCTAGATTTCCTTATCCTGGGGACACTATGGATGCGACCTACTTTGCACGTAAGGCAAACAATGTGATCCTGAATCGT
TCATGTAAAGACATGCGAGTGGGGGCATCTTGTGCAATGAGATTATCCTTTGATTTACACGGGCCGACAACAAATCCGGCCTATACCAATGGGCTGATTACATCCTTGAA
ATCGGCTTTCTTCCCCAGCCCATCAAAATTGAAGCTCTCCGCAAATGGGAATGGCCTCAACCTCATCATTCCAGAGCCATTGATTTTGGAAGCCCAAAGGCGCCATCGAC
GACCATTGCTGTCAGGGCACAGAAACCAACGCTCTGGTCTATTCGATCATCTTGATAAGTTTTTCCAATTTTCACCATTTCTAAAATTCTACGCCATGGGGCGGCTTAAA
TTGACTAACCCTCTGTGTTCGTCTCCCCAATTGGATGGTTTCGTGCCTTAG
Protein sequenceShow/hide protein sequence
MLKKLRYWNPRLSSPYAFKYFLRNFSLWSMKKDPDLESALSRNRRWIVNNQIKNIILPCPNQTAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLHDDEYYFRLTKRM
MALVEEEETVKDMQEPIFVERLAKLLMMASNQRLNVPAFSCSLPTTWVNSWERFHELNASPPYVNPRGLVQGTKEREKRTVGLIHEILSLTLWEKASIMKLGHFSREFGL
PAKLNTLLLKHPGIFYVSNKYQIYTDDESLRRWKEQLLAVVDLENAGGICSHIFPLCPKGKLLLLDSNVVSYSLLLVFSLCFLLNEFGSSVRDDTYALKKVLIQSSEPLE
LVVAEMFLLCLLSKILNAVSCAFALNDTETLKKYYGVEVNSSQFGSHKPVLRPENSTKDLGGRPQRIRVENHPTKCLESSYKNKARFPYPGDTMDATYFARKANNVILNR
SCKDMRVGASCAMRLSFDLHGPTTNPAYTNGLITSLKSAFFPSPSKLKLSANGNGLNLIIPEPLILEAQRRHRRPLLSGHRNQRSGLFDHLDKFFQFSPFLKFYAMGRLK
LTNPLCSSPQLDGFVP