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Spg016008 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016008
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionycf49-like protein
Genome locationscaffold6:43211156..43214980
RNA-Seq ExpressionSpg016008
SyntenySpg016008
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596827.1 hypothetical protein SDJN03_10007, partial [Cucurbita argyrosperma subsp. sororia]2.3e-2977.5Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFN
        MSLTSTL  SFSNPK PISSSSSSSSSLPRS  DFAA     T  R  RIIG+GLAL SKTMVVL+GTG TLALLGPESA   +AA ELQ    SSLQFN
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFN

Query:  EPQNALSLPTWAIHVSSVVE
        EPQNALSLPTWAIHVSSVVE
Subjt:  EPQNALSLPTWAIHVSSVVE

KAG7028356.1 hypothetical protein SDJN02_09537, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-2876.23Show/hide
Query:  MSLTSTLSYSFSNPKSPI--SSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQ
        MSLTSTL  SFSNPK PI  SSSSSSSSSLPRS  DFAA     T  R  RIIG+GLAL SKTMVVL+GTG TLALLGPESA   +AA ELQ    SSLQ
Subjt:  MSLTSTLSYSFSNPKSPI--SSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQ

Query:  FNEPQNALSLPTWAIHVSSVVE
        FNEPQNALSLPTWAIHVSSVVE
Subjt:  FNEPQNALSLPTWAIHVSSVVE

XP_022152779.1 uncharacterized protein LOC111020415 [Momordica charantia]5.9e-3381.03Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFAAPT----GTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQ----SSLQFNEPQN
        M LTSTL +SFSNPK PISSSSSSS   PRSRDFAAP+    G R RRIIG+GL L SK+MVVLLGTGFTLALLGPESASAAAELQ    SSLQFNEPQN
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFAAPT----GTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQ----SSLQFNEPQN

Query:  ALSLPTWAIHVSSVVE
        ALSLPTWAIHVSSVVE
Subjt:  ALSLPTWAIHVSSVVE

XP_023005556.1 uncharacterized protein LOC111498507 [Cucurbita maxima]8.9e-2977.31Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPES--ASAAAELQ----SSLQFNE
        MSLTSTL +SFSNPK PI  SSSSSSSLPRS  DFAA     TG R  RIIG+GLAL SKTMVVL+GTG TLALLGPES  A+AA ELQ    SSLQFNE
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPES--ASAAAELQ----SSLQFNE

Query:  PQNALSLPTWAIHVSSVVE
        PQNALSLPTWAIHVSSVVE
Subjt:  PQNALSLPTWAIHVSSVVE

XP_023539827.1 uncharacterized protein LOC111800391 [Cucurbita pepo subsp. pepo]4.4e-2875.83Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFN
        MSLTSTL +SFSNPK PI  SSSSSSSLPRS  DFAA     TG R  R IG+GLAL SKTMVVL+GTG TLALLGPESA   +AA ELQ    SSLQFN
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFN

Query:  EPQNALSLPTWAIHVSSVVE
        EPQNALSLPTWAIHVSSVVE
Subjt:  EPQNALSLPTWAIHVSSVVE

TrEMBL top hitse value%identityAlignment
A0A1S3BLS2 ycf49-like protein1.9e-2471.43Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFA----APTGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSL
        MSLTS L YSFS PKSP          LP S DFA     PTG   RR I S L   SK MVVLLGTGFTLALLGPESASAA ELQSSL FNEPQNALSL
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFA----APTGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSL

Query:  PTWAIHVSSVVE
        PTWAIHVSSVVE
Subjt:  PTWAIHVSSVVE

A0A5D3D7E0 Ycf49-like protein1.9e-2471.43Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFA----APTGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSL
        MSLTS L YSFS PKSP          LP S DFA     PTG   RR I S L   SK MVVLLGTGFTLALLGPESASAA ELQSSL FNEPQNALSL
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFA----APTGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSL

Query:  PTWAIHVSSVVE
        PTWAIHVSSVVE
Subjt:  PTWAIHVSSVVE

A0A6J1DH09 uncharacterized protein LOC1110204152.9e-3381.03Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFAAPT----GTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQ----SSLQFNEPQN
        M LTSTL +SFSNPK PISSSSSSS   PRSRDFAAP+    G R RRIIG+GL L SK+MVVLLGTGFTLALLGPESASAAAELQ    SSLQFNEPQN
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFAAPT----GTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQ----SSLQFNEPQN

Query:  ALSLPTWAIHVSSVVE
        ALSLPTWAIHVSSVVE
Subjt:  ALSLPTWAIHVSSVVE

A0A6J1FXT1 uncharacterized protein LOC1114487096.2e-2876.67Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFN
        MSLTSTL  SFSNPK PI SSSSSSSSLPRS  DFAA     T  R  RIIG+GLAL SKTMVVL+GTG TLALLGPESA   +AA ELQ    SSLQFN
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESA---SAAAELQ----SSLQFN

Query:  EPQNALSLPTWAIHVSSVVE
        EPQNALSLPTWAIHVSSVVE
Subjt:  EPQNALSLPTWAIHVSSVVE

A0A6J1KVA7 uncharacterized protein LOC1114985074.3e-2977.31Show/hide
Query:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPES--ASAAAELQ----SSLQFNE
        MSLTSTL +SFSNPK PI  SSSSSSSLPRS  DFAA     TG R  RIIG+GLAL SKTMVVL+GTG TLALLGPES  A+AA ELQ    SSLQFNE
Subjt:  MSLTSTLSYSFSNPKSPISSSSSSSSSLPRS-RDFAAP----TGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPES--ASAAAELQ----SSLQFNE

Query:  PQNALSLPTWAIHVSSVVE
        PQNALSLPTWAIHVSSVVE
Subjt:  PQNALSLPTWAIHVSSVVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G22830.1 unknown protein6.6e-0641.51Show/hide
Query:  TSTLSYSFSNPK-SPISSSSSSSSSLPRSRDFAAPTGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIH
        T+T+ +  + P    I S S  +SSL  S +       R R +I   +AL       L+   F  A  GP+ A+A A +  SLQ +EP NALSLPTWA+H
Subjt:  TSTLSYSFSNPK-SPISSSSSSSSSLPRSRDFAAPTGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIH

Query:  VSSVVE
        VSSVVE
Subjt:  VSSVVE

AT4G22830.2 unknown protein9.2e-0850Show/hide
Query:  RLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIHVSSVVE
        R R +I   +AL       L+   F  A  GP+ A+A A +  SLQ +EP NALSLPTWA+HVSSVVE
Subjt:  RLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIHVSSVVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTCACCTCCACCTTGTCATATTCCTTCTCTAATCCCAAATCGCCCATTTCGTCTTCTTCTTCCTCCTCCTCCTCGCTGCCCAGGTCCAGAGATTTTGCCGCTCC
GACGGGAACCCGACTCCGGAGGATTATCGGTTCCGGTCTGGCTTTGCACTCGAAAACCATGGTGGTTTTGCTCGGCACGGGCTTCACTCTGGCCCTTCTGGGACCTGAAT
CGGCTTCTGCTGCGGCGGAATTGCAGTCTTCGCTGCAATTTAACGAGCCCCAGAATGCTCTGTCCTTGCCCACCTGGGCCATTCACGTTTCCAGTGTTGTTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTCACCTCCACCTTGTCATATTCCTTCTCTAATCCCAAATCGCCCATTTCGTCTTCTTCTTCCTCCTCCTCCTCGCTGCCCAGGTCCAGAGATTTTGCCGCTCC
GACGGGAACCCGACTCCGGAGGATTATCGGTTCCGGTCTGGCTTTGCACTCGAAAACCATGGTGGTTTTGCTCGGCACGGGCTTCACTCTGGCCCTTCTGGGACCTGAAT
CGGCTTCTGCTGCGGCGGAATTGCAGTCTTCGCTGCAATTTAACGAGCCCCAGAATGCTCTGTCCTTGCCCACCTGGGCCATTCACGTTTCCAGTGTTGTTGAGTGA
Protein sequenceShow/hide protein sequence
MSLTSTLSYSFSNPKSPISSSSSSSSSLPRSRDFAAPTGTRLRRIIGSGLALHSKTMVVLLGTGFTLALLGPESASAAAELQSSLQFNEPQNALSLPTWAIHVSSVVE