CuGenDBv2

Gene ID	Spg016011
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Photosystem II CP43 reaction center protein
Genome location	scaffold6:39525857..39526673
RNA-Seq Expression	Spg016011
Synteny	Spg016011
Gene Ontology terms	GO:0009772 - photosynthetic electron transport in photosystem II (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009523 - photosystem II (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000932 - Photosystem antenna protein-like IPR036001 - Photosystem antenna protein-like superfamily IPR044900 - Photosystem II CP43 reaction centre protein superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAZ04075.1 photosystem II 44 kDa protein, partial [Acorus americanus]

2.6e-115

80.9

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGGRC---------------------------------------------SICILGGIWHILTKPFAWARRALV
        LLG+GAFLLVFKALYFGGVYDTWA  GGGRC                                             SICILGGIWHILTKPFAWARRA V
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGGRC---------------------------------------------SICILGGIWHILTKPFAWARRALV

Query:  WSGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        WSGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  WSGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

KQK24086.1 hypothetical protein BRADI_1g78082v3 [Brachypodium distachyon]

8.1e-117

87.55

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGGRC-------------------SICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALYVFGFIACCFVW
        LLGLGAFLLV KALYFGGVYDTWA GGGG C                    IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL AL VFGFIACCFVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGGRC-------------------SICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALYVFGFIACCFVW

Query:  FNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        FNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  FNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

QGA85764.1 photosystem II CP43 chlorophyll apoprotein, partial [Hymenostegia brachyura]

1.2e-115

81.2

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA GGGG                                              SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

YP_009767520.1 photosystem II 44 kDa protein [Daniellia ogea]

1.2e-115

81.2

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA GGGG                                              SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

YP_009771820.1 photosystem II CP43 chlorophyll apoprotein [Baphia racemosa]

1.5e-115

80.83

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGG+YDTWA GGGG                                              SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

TrEMBL top hits

e value

%identity

Alignment

A0A0Q3P231 Uncharacterized protein

3.9e-117

87.55

Show/hide

Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGGRC-------------------SICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALYVFGFIACCFVW
        LLGLGAFLLV KALYFGGVYDTWA GGGG C                    IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL AL VFGFIACCFVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGGRC-------------------SICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALYVFGFIACCFVW

Query:  FNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        FNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  FNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

A0A251VI22 Photosystem II D2 protein

8.8e-117

88.02

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------RCSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALYVFGFIACCFV
        LLGLGAFLLVFKALYFGGVYDTWA GGG                       SICILGGIWHILTKPF WARRALVWSGEAYLSYSL A+ VFGFIACCFV
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------RCSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALYVFGFIACCFV

Query:  WFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        WFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  WFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

A0A5Q0UWA7 Photosystem II CP43 reaction center protein (Fragment)

5.7e-116

81.2

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA GGGG                                              SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

A0A6H0E9P4 Photosystem II CP43 reaction center protein

5.7e-116

81.2

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA GGGG                                              SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

A0A6H0EL68 Photosystem II CP43 reaction center protein

7.4e-116

80.83

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGG+YDTWA GGGG                                              SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

SwissProt top hits

e value

%identity

Alignment

B1NWE6 Photosystem II CP43 reaction center protein

1.0e-117

80.83

Show/hide

Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA GGG                                               SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

P06413 Photosystem II CP43 reaction center protein

5.9e-118

81.2

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA GGG                                               SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

Q33C41 Photosystem II CP43 reaction center protein

5.9e-118

81.2

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA GGG                                               SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

Q3C1I3 Photosystem II CP43 reaction center protein

5.9e-118

81.2

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Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLGLGAFLLVFKALYFGGVYDTWA GGG                                               SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

Q8S8X7 Photosystem II CP43 reaction center protein

1.0e-117

80.83

Show/hide

Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA GGG                                               SICILGGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSLGAL VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

Arabidopsis top hits

e value

%identity

Alignment

ATCG00280.1 photosystem II reaction center protein C

1.1e-116

79.7

Show/hide

Query:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
        MNLFEVAHFV EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI
Subjt:  MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLI

Query:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW
        LLG+GAFLLVFKALYFGGVYDTWA GGG                                               SICI GGIWHILTKPFAWARRALVW
Subjt:  LLGLGAFLLVFKALYFGGVYDTWALGGGG--------------------------------------------RCSICILGGIWHILTKPFAWARRALVW

Query:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
        SGEAYLSYSL AL V GFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ
Subjt:  SGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQ

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAACCTATTCGAAGTGGCTCATTTCGTACTGGAGAAGCCCATGTATGAACAAGGATTAATTTTACTTCCCCACCTAGCTACTCTAGGTTGGGGGGTAGGTCCTGGTGG
GGAAGTTATAGACACCTTTCCTTACTTTGTGTCTGGAGTACTTCACTTAATTTCCTCCGCAGTATTGGGTTTTGGCGGTATTTATCATGCACTTCTGGGACCCGAGACCC
TGGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACTACCATTTTGGGTATTCACTTAATTTTGTTAGGTCTAGGTGCTTTTCTTCTAGTA
TTCAAAGCTCTTTATTTTGGGGGCGTATATGATACCTGGGCTCTGGGGGGGGGGGGGAGATGTTCCATTTGTATACTTGGTGGAATTTGGCATATCTTAACTAAACCCTT
TGCATGGGCTCGTCGCGCACTTGTATGGTCTGGAGAAGCTTACTTGTCTTATAGTTTAGGTGCTTTATATGTTTTTGGTTTTATTGCTTGTTGTTTTGTCTGGTTCAATA
ATACTGCTTATCCGAGTGAGTTTTACGGGCCGACTGGACCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGTCTTGGAGCTAACGTTGGATCC
GCTCAGGACCTACTGGTTTAG

mRNA sequence

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Protein sequence

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MNLFEVAHFVLEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLV
FKALYFGGVYDTWALGGGGRCSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALYVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGS
AQDLLV

Spg016011 (gene) of Sponge gourd (cylindrica) v1 genome