; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016021 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016021
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpeptidyl-tRNA hydrolase ICT1, mitochondrial
Genome locationscaffold6:43514123..43520845
RNA-Seq ExpressionSpg016021
SyntenySpg016021
Gene Ontology termsGO:0006415 - translational termination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003747 - translation release factor activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR000352 - Peptide chain release factor class I


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2298991.1 hypothetical protein GH714_029582 [Hevea brasiliensis]3.3e-6088.44Show/hide
Query:  LSLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAA
        +S  DHVTVNFARSGGPGGQNVNK         VNTKVDMRF+VKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGN+EDAL KLQAIIDAA
Subjt:  LSLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAA

Query:  SYVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        +YV PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
Subjt:  SYVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

XP_021616566.1 peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1 [Manihot esculenta]3.0e-6192.31Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        DHVTVNFARSGGPGGQNVNK         VNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDAL KLQAIIDAASYV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

XP_021691536.1 peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X2 [Hevea brasiliensis]2.5e-6089.04Show/hide
Query:  SLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAAS
        S  DHVTVNFARSGGPGGQNVNK         VNTKVDMRF+VKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGN+EDAL KLQAIIDAA+
Subjt:  SLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAAS

Query:  YVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        YV PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
Subjt:  YVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

XP_022152820.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Momordica charantia]3.0e-6192.31Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        DHVTVNFARSGGPGGQNVNK         VNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKIAKMAAIGEQKRLKSKK LSDKKAFRRSRDSWD
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

XP_028762680.1 peptidyl-tRNA hydrolase ICT1, mitochondrial [Prosopis alba]4.3e-6090.21Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        DHVTVNFARSGGPGGQNVNK         VNTKVDMRFNVK+AYWL DRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAA+YV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRS+DSWD
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

TrEMBL top hitse value%identityAlignment
A0A067K023 RF_PROK_I domain-containing protein1.0e-5988.81Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        DHVTV+FARSGGPGGQNVNK         VNTKVDMRFNVKDAYWLS+R+RERIMQMEKNRINKDGE+VISSTKTRTQKGNIEDAL KLQAIIDAASYV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKIAK+AAIGEQKRLKSKKALSDKKAFRRSRDSWD
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

A0A2C9WIQ0 RF_PROK_I domain-containing protein1.5e-6192.31Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        DHVTVNFARSGGPGGQNVNK         VNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDAL KLQAIIDAASYV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

A0A438ESH7 Peptidyl-tRNA hydrolase ICT1, mitochondrial1.8e-5981.01Show/hide
Query:  LLYLCEFIFSCLSLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDA
        L+ L   +FS + ++DHVTV+FARSGGPGGQNVNK         VNTKVDMRFNVK+AYWLSDRIRERIMQMEKNRINKDGE+VISSTKTRTQKGNIEDA
Subjt:  LLYLCEFIFSCLSLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDA

Query:  LEKLQAIIDAASYVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        L KLQAIIDAASYV PPPSEEQKKKIAK+AAIGEQKRL++KK LS KKAFRRSRDSWD
Subjt:  LEKLQAIIDAASYVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

A0A6A6LC16 RF_PROK_I domain-containing protein1.6e-6088.44Show/hide
Query:  LSLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAA
        +S  DHVTVNFARSGGPGGQNVNK         VNTKVDMRF+VKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGN+EDAL KLQAIIDAA
Subjt:  LSLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAA

Query:  SYVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        +YV PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
Subjt:  SYVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

A0A6J1DF18 peptidyl-tRNA hydrolase ICT1, mitochondrial1.5e-6192.31Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        DHVTVNFARSGGPGGQNVNK         VNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKIAKMAAIGEQKRLKSKK LSDKKAFRRSRDSWD
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

SwissProt top hitse value%identityAlignment
B5XAM2 Peptidyl-tRNA hydrolase ICT1, mitochondrial3.1e-1639.42Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        D +TV+++RS GPGGQ+VNK         V+TK ++RF+V  A W+ + +R++I+   KNRINK GEL+++S ++R+Q+ N+ D ++K+  II  A+   
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRR
          PS E     A       ++RLK KK  S  K  RR
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRR

D2HD32 Peptidyl-tRNA hydrolase ICT1, mitochondrial5.8e-1535.77Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        D +T+++ RS GPGGQNVNK         VN+K ++RF++  A W+++ +R+++  M KN+IN+ GEL+++S  +R Q  N+ D L+K++ +I  AS   
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRR
          PS+E             ++RL+ K+  S  K  RR
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRR

Q14197 Peptidyl-tRNA hydrolase ICT1, mitochondrial4.4e-1535.77Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        D +T+++ RS GPGGQNVNK         VN+K ++RF++  A W+++ +R++I    KN+IN+ GEL+++S  +R Q  N+ D L+K++ +I  AS   
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRR
          P++E  K          ++RL+ K+  S  K  RR
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRR

Q3T116 Peptidyl-tRNA hydrolase ICT1, mitochondrial3.4e-1536.88Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        D +T+++ RS GPGGQNVNK         VN+K ++RF++  A W+++ +R+++    KN+IN+ GEL+++S  +R Q  N+ D L+K++ +I  AS   
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEE----QKKKIAKMAAIGEQKRLKSKKALSDKKAFRR
          PS+E    QK +I  M     ++RL+ K+  S  K  RR
Subjt:  PPPSEE----QKKKIAKMAAIGEQKRLKSKKALSDKKAFRR

Q8R035 Peptidyl-tRNA hydrolase ICT1, mitochondrial5.2e-1638.3Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        D +++++ RS GPGGQNVNK         VN+K ++RF++  A W+ + +R++I    KN+INK GELV++S  +R Q  N+ + L+K++ +I  AS V 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEE----QKKKIAKMAAIGEQKRLKSKKALSDKKAFRR
          PS+E    Q+ +I KM     ++RL+ K+  S  K  RR
Subjt:  PPPSEE----QKKKIAKMAAIGEQKRLKSKKALSDKKAFRR

Arabidopsis top hitse value%identityAlignment
AT1G62850.2 Class I peptide chain release factor2.2e-5479.02Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        D+VT+NFARSGGPGGQNVNK         +NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELVISSTKTRTQKGNI+DALEKLQAIIDAASYV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKI K+AA  + KRLKSKK LSDKK+ RRSR S+D
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD

AT1G62850.3 Class I peptide chain release factor2.2e-5479.02Show/hide
Query:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL
        D+VT+NFARSGGPGGQNVNK         +NTKVDMRFNVK+AYWLSDRIRE+I+  EKNRINKDGELVISSTKTRTQKGNI+DALEKLQAIIDAASYV 
Subjt:  DHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVISSTKTRTQKGNIEDALEKLQAIIDAASYVL

Query:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD
        PPPSEEQKKKI K+AA  + KRLKSKK LSDKK+ RRSR S+D
Subjt:  PPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCTTTTGGCTAGCTTGAAAAGGGAGAAAAGGCGTGTTTGCAGCATTGAGACGTTGGTTGTAGCTCATCATCTTCTTTACTTGTGTGAATTTATCTTTTCCTGTCT
CTCCCTCACAGACCATGTCACTGTGAATTTTGCAAGAAGTGGTGGCCCTGGGGGTCAGAATGTCAACAAAGGTATTATTTCCGTAATTGATAGTGCAGTGAACACGAAGG
TTGACATGCGCTTCAATGTTAAAGATGCATATTGGCTAAGTGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATCGGATCAATAAGGATGGGGAGCTTGTAATT
TCATCCACTAAAACTAGAACGCAGAAGGGTAACATTGAGGATGCCTTGGAGAAACTTCAGGCAATAATCGATGCTGCTTCTTATGTTCTGCCACCTCCCTCAGAAGAACA
AAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAACAGAAACGCCTTAAAAGCAAGAAGGCCCTTTCAGATAAGAAGGCGTTTCGAAGGAGTCGAGACAGTTGGGATT
AA
mRNA sequenceShow/hide mRNA sequence
ATGACTCTTTTGGCTAGCTTGAAAAGGGAGAAAAGGCGTGTTTGCAGCATTGAGACGTTGGTTGTAGCTCATCATCTTCTTTACTTGTGTGAATTTATCTTTTCCTGTCT
CTCCCTCACAGACCATGTCACTGTGAATTTTGCAAGAAGTGGTGGCCCTGGGGGTCAGAATGTCAACAAAGGTATTATTTCCGTAATTGATAGTGCAGTGAACACGAAGG
TTGACATGCGCTTCAATGTTAAAGATGCATATTGGCTAAGTGACAGAATCAGGGAAAGGATTATGCAAATGGAGAAAAATCGGATCAATAAGGATGGGGAGCTTGTAATT
TCATCCACTAAAACTAGAACGCAGAAGGGTAACATTGAGGATGCCTTGGAGAAACTTCAGGCAATAATCGATGCTGCTTCTTATGTTCTGCCACCTCCCTCAGAAGAACA
AAAGAAGAAAATTGCTAAGATGGCTGCTATTGGGGAACAGAAACGCCTTAAAAGCAAGAAGGCCCTTTCAGATAAGAAGGCGTTTCGAAGGAGTCGAGACAGTTGGGATT
AA
Protein sequenceShow/hide protein sequence
MTLLASLKREKRRVCSIETLVVAHHLLYLCEFIFSCLSLTDHVTVNFARSGGPGGQNVNKGIISVIDSAVNTKVDMRFNVKDAYWLSDRIRERIMQMEKNRINKDGELVI
SSTKTRTQKGNIEDALEKLQAIIDAASYVLPPPSEEQKKKIAKMAAIGEQKRLKSKKALSDKKAFRRSRDSWD