; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016030 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016030
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold6:44969464..44978806
RNA-Seq ExpressionSpg016030
SyntenySpg016030
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW48791.1 hypothetical protein CK203_076065 [Vitis vinifera]1.9e-0835.45Show/hide
Query:  SSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGEPGSS
        SS F    + DS +WSL  S +FS+KS    L   S+  L      +W    P K+K   W ++   +NT D LQ R P+ SL   WCI+   +   G S
Subjt:  SSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGEPGSS

Query:  FCHLFFCYPI
          H+F  YP+
Subjt:  FCHLFFCYPI

RVX22527.1 hypothetical protein CK203_012735 [Vitis vinifera]5.6e-0836.7Show/hide
Query:  SSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGEPGSSF
        SS L   ++DS +WSL  S LFS+KS    L   S+  L      +W    P K+KI  W ++   +NT D L+ R P+ +L   WCI+    GE   S 
Subjt:  SSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGEPGSSF

Query:  CHLFFCYPI
         HLF   P+
Subjt:  CHLFFCYPI

TYK09967.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]7.8e-1043.82Show/hide
Query:  DMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE
        +++D WSW L+PS +FS+KSL+  L G   T+ +NLY  IW + YPKKI IF  ELSL  +N+ D        F L  S CI+     E
Subjt:  DMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE

VVA20721.1 Hypothetical predicted protein, partial [Prunus dulcis]3.6e-0737.21Show/hide
Query:  DSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE
        D   W L+PS LF+  SL + +Q   +  +   Y+ IWK   P K+KIF W+  L  +NT D LQ R P+  +   WC +  K G+
Subjt:  DSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE

VVA33204.1 PREDICTED: ribonuclease H [Prunus dulcis]1.5e-0835.48Show/hide
Query:  LSSSFG-RRQLHRLRRRLLVAVVVPWLTSSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVD
        LS  FG RR L+ L   +  A  +  L     L+    D   W L+PS LF+  SL + +Q   +  + + Y+ IWK   P K+KIF W+  L  +NT D
Subjt:  LSSSFG-RRQLHRLRRRLLVAVVVPWLTSSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVD

Query:  HLQCRLPHFSLLSSWCIVLFKYGE
         LQ R P+  +   WC +  K GE
Subjt:  HLQCRLPHFSLLSSWCIVLFKYGE

TrEMBL top hitse value%identityAlignment
A0A438EM29 zf-RVT domain-containing protein9.3e-0935.45Show/hide
Query:  SSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGEPGSS
        SS F    + DS +WSL  S +FS+KS    L   S+  L      +W    P K+K   W ++   +NT D LQ R P+ SL   WCI+   +   G S
Subjt:  SSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGEPGSS

Query:  FCHLFFCYPI
          H+F  YP+
Subjt:  FCHLFFCYPI

A0A5D3CDA3 Calpain-type cysteine protease DEK13.8e-1043.82Show/hide
Query:  DMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE
        +++D WSW L+PS +FS+KSL+  L G   T+ +NLY  IW + YPKKI IF  ELSL  +N+ D        F L  S CI+     E
Subjt:  DMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE

A0A5E4G0J2 PREDICTED: ribonuclease H7.1e-0935.48Show/hide
Query:  LSSSFG-RRQLHRLRRRLLVAVVVPWLTSSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVD
        LS  FG RR L+ L   +  A  +  L     L+    D   W L+PS LF+  SL + +Q   +  + + Y+ IWK   P K+KIF W+  L  +NT D
Subjt:  LSSSFG-RRQLHRLRRRLLVAVVVPWLTSSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVD

Query:  HLQCRLPHFSLLSSWCIVLFKYGE
         LQ R P+  +   WC +  K GE
Subjt:  HLQCRLPHFSLLSSWCIVLFKYGE

M5WDM3 zf-RVT domain-containing protein (Fragment)9.3e-0936.96Show/hide
Query:  LVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE
        L+    D   W L+PS LFS  S  + +Q   +  + + Y+ IWK   P K+KIF W+  L  +NT D LQ R P+  L   WC++    GE
Subjt:  LVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVDHLQCRLPHFSLLSSWCIVLFKYGE

M5XUF8 Reverse transcriptase domain-containing protein (Fragment)1.2e-0835.48Show/hide
Query:  LSSSFG-RRQLHRLRRRLLVAVVVPWLTSSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVD
        LS  FG RR L+ L   +  A  +  L     L+    D   W L+PS LF+  S  A +Q   +  + + Y+ IWK   P K+KIF W+  L  +NT D
Subjt:  LSSSFG-RRQLHRLRRRLLVAVVVPWLTSSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTVD

Query:  HLQCRLPHFSLLSSWCIVLFKYGE
         LQ R P+  +   WC +  K GE
Subjt:  HLQCRLPHFSLLSSWCIVLFKYGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAATCGATGGATGTAGAAGGGAGAACCATGGATCGAATGATGGAGGAAGGGGAAGGGATTCTCTCGAAGGATCAGGATGATGGAGGAAGGGGAAAGGATTTTCT
CGGTGAACGGTGTTCATCCCACATGTTAGGTGTTCATTTTTTCTTCTTTGATTTCGTGTCTGGTTTATTTTTTTTGTTGGATCTGTTCTTCATTGTTGCGGATACAGTGT
TTAATCAAAAACTGAGGGTGTTTGTCCTTGGCCTATTCCCATCCAAAGGGGATCCTTCAAATCTCCTTGTTGCTATTACCATCGCTTGGTTGCCGTCAGCTCGTCGTTCC
AGCCGTGAATGTGCTGCTTCTCCTTCGTTGTGGTTGCTGTCGTCGTCGTTTGGTCGCCGTCAACTTCATCGTCTTCGTCGTCGCCTCTTGGTCGCCGTCGTCGTGCCTTG
GTTGACGTCTTCTTCGTTCCTTGTCTGCGATATGAATGACTCTTGGTCCTGGTCCCTTGAACCATCCAAGTTGTTCTCCATTAAATCTTTGATGGCTGACCTTCAAGGTG
GTTCTGATACTACTTTGAATAACCTGTATTCGATGATATGGAAAGATAATTATCCTAAAAAGATAAAAATCTTTCAATGGGAGCTTAGCCTTAGAGCTATTAATACAGTG
GACCATCTTCAATGTAGGTTGCCTCACTTTTCCCTTTTGTCATCGTGGTGTATTGTGCTCTTCAAATATGGAGAACCCGGGTCATCTTTTTGTCACCTGTTCTTTTGCTA
CCCAATATTGGAACTTGATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAATCGATGGATGTAGAAGGGAGAACCATGGATCGAATGATGGAGGAAGGGGAAGGGATTCTCTCGAAGGATCAGGATGATGGAGGAAGGGGAAAGGATTTTCT
CGGTGAACGGTGTTCATCCCACATGTTAGGTGTTCATTTTTTCTTCTTTGATTTCGTGTCTGGTTTATTTTTTTTGTTGGATCTGTTCTTCATTGTTGCGGATACAGTGT
TTAATCAAAAACTGAGGGTGTTTGTCCTTGGCCTATTCCCATCCAAAGGGGATCCTTCAAATCTCCTTGTTGCTATTACCATCGCTTGGTTGCCGTCAGCTCGTCGTTCC
AGCCGTGAATGTGCTGCTTCTCCTTCGTTGTGGTTGCTGTCGTCGTCGTTTGGTCGCCGTCAACTTCATCGTCTTCGTCGTCGCCTCTTGGTCGCCGTCGTCGTGCCTTG
GTTGACGTCTTCTTCGTTCCTTGTCTGCGATATGAATGACTCTTGGTCCTGGTCCCTTGAACCATCCAAGTTGTTCTCCATTAAATCTTTGATGGCTGACCTTCAAGGTG
GTTCTGATACTACTTTGAATAACCTGTATTCGATGATATGGAAAGATAATTATCCTAAAAAGATAAAAATCTTTCAATGGGAGCTTAGCCTTAGAGCTATTAATACAGTG
GACCATCTTCAATGTAGGTTGCCTCACTTTTCCCTTTTGTCATCGTGGTGTATTGTGCTCTTCAAATATGGAGAACCCGGGTCATCTTTTTGTCACCTGTTCTTTTGCTA
CCCAATATTGGAACTTGATGCTTGA
Protein sequenceShow/hide protein sequence
MEESMDVEGRTMDRMMEEGEGILSKDQDDGGRGKDFLGERCSSHMLGVHFFFFDFVSGLFFLLDLFFIVADTVFNQKLRVFVLGLFPSKGDPSNLLVAITIAWLPSARRS
SRECAASPSLWLLSSSFGRRQLHRLRRRLLVAVVVPWLTSSSFLVCDMNDSWSWSLEPSKLFSIKSLMADLQGGSDTTLNNLYSMIWKDNYPKKIKIFQWELSLRAINTV
DHLQCRLPHFSLLSSWCIVLFKYGEPGSSFCHLFFCYPILELDA