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Spg016039 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016039
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein cornichon homolog 4-like
Genome locationscaffold6:43339354..43343482
RNA-Seq ExpressionSpg016039
SyntenySpg016039
Gene Ontology termsGO:0016192 - vesicle-mediated transport (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR003377 - Cornichon


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008448916.1 PREDICTED: protein cornichon homolog 4 isoform X1 [Cucumis melo]2.7e-4066.67Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        M DLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEF++MGVLCLFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIY+ALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

XP_022943501.1 protein cornichon homolog 4-like [Cucurbita moschata]2.1e-4065.96Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSAS+INKVI PEFISMGVLCLFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIYYALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

XP_023005595.1 protein cornichon homolog 4-like [Cucurbita maxima]7.2e-4166.67Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLCLFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIYYALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

XP_023539252.1 protein cornichon homolog 4-like [Cucurbita pepo subsp. pepo]7.2e-4166.67Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLCLFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIYYALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

XP_038876883.1 protein cornichon homolog 4-like [Benincasa hispida]1.6e-4067.38Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVI+PEF+S+GVLCLFYLLTGHWGMSMICGPYIYYNV+L  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIY ALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

TrEMBL top hitse value%identityAlignment
A0A1S3BLR3 protein cornichon homolog 4 isoform X11.3e-4066.67Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        M DLYVWLVSFF LIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEF++MGVLCLFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIY+ALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

A0A6J1E6H8 protein cornichon homolog 4-like1.5e-3963.83Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEF+++GVLCLFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIY ALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

A0A6J1FRW5 protein cornichon homolog 4-like1.0e-4065.96Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSAS+INKVI PEFISMGVLCLFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIYYALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

A0A6J1HL36 protein cornichon homolog 4-like1.1e-3964.54Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDL+VWL+SFF L+ALLIVLVYQLMCLADLEFDYINPYDSASRINKV+MPEFI++GVLCLFYLLTGHWGMSM+CGPYIYYNV+L  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIY ALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

A0A6J1KXU1 protein cornichon homolog 4-like3.5e-4166.67Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGDLYVWLVSFF LIALLIVL+YQLMCLADLEFDYINPYDSASRINKVI PEFISMGVLCLFYLLTGHWGMS++CGPYIYYNV++  +     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++  L      +    WMIYYALEDDE
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

SwissProt top hitse value%identityAlignment
Q3EDD7 Probable protein cornichon homolog 24.0e-2650.83Show/hide
Query:  VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLPE
        ++ L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN  L SK     D+  I+          L  +A++     
Subjt:  VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLPE

Query:  WLGTYEDSTWMIYYALEDDE
         L  +    WMIY AL+D E
Subjt:  WLGTYEDSTWMIYYALEDDE

Q84W04 Protein cornichon homolog 48.9e-3453.9Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGD++ WL+SFF LIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN  L SK     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++      L  +    WMIY AL+D E
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

Q8GWT5 Protein cornichon homolog 31.2e-2745.83Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYL
        MG+++ W++SF +LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE I  G LC+FYL+TGHW M+++C PY+YYN  L S+     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYL

Query:  PAIAFMPQLPEW-------------LGTYEDSTWMIYYALEDDE
                L +W             L  +    W+IY  L+D E
Subjt:  PAIAFMPQLPEW-------------LGTYEDSTWMIYYALEDDE

Q9C7D7 Protein cornichon homolog 18.9e-1842.27Show/hide
Query:  DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY
        DL++W+VSFFV +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEFI  G LCL +LLT HW   ++  P   Y+  L  +     D+  ++
Subjt:  DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY

Q9SZ74 Protein cornichon homolog 55.8e-2551.52Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY
        MGDL  W++SF  L  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LCL+Y+LTGHW M+++  P+++YN++L  K     D+  +Y
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY

Arabidopsis top hitse value%identityAlignment
AT1G12340.1 Cornichon family protein2.8e-2750.83Show/hide
Query:  VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLPE
        ++ L+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN  L SK     D+  I+          L  +A++     
Subjt:  VYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY----------LPAIAFMPQLPE

Query:  WLGTYEDSTWMIYYALEDDE
         L  +    WMIY AL+D E
Subjt:  WLGTYEDSTWMIYYALEDDE

AT1G12390.1 Cornichon family protein6.3e-3553.9Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-
        MGD++ WL+SFF LIAL+ ++VYQL+CLADLEFDYINPYDSASRIN V++PEFI  GVLC+FYLLTGHW M+++C PY+YYN  L SK     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY-

Query:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE
                 L  +A++      L  +    WMIY AL+D E
Subjt:  ---------LPAIAFMPQLPEWLGTYEDSTWMIYYALEDDE

AT1G62880.1 Cornichon family protein8.8e-2945.83Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYL
        MG+++ W++SF +LI LL ++VYQL+ LADLEFDYINPYDSASRIN V++PE I  G LC+FYL+TGHW M+++C PY+YYN  L S+     D+  I+ 
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYL

Query:  PAIAFMPQLPEW-------------LGTYEDSTWMIYYALEDDE
                L +W             L  +    W+IY  L+D E
Subjt:  PAIAFMPQLPEW-------------LGTYEDSTWMIYYALEDDE

AT3G12180.1 Cornichon family protein6.3e-1942.27Show/hide
Query:  DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY
        DL++W+VSFFV +AL+  + YQ++CL DLE DY+NP+++++RIN++++PEFI  G LCL +LLT HW   ++  P   Y+  L  +     D+  ++
Subjt:  DLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY

AT4G12090.1 Cornichon family protein4.1e-2651.52Show/hide
Query:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY
        MGDL  W++SF  L  L+I+++YQL CLADLEFD INPYD +SRIN++++PEF   G+LCL+Y+LTGHW M+++  P+++YN++L  K     D+  +Y
Subjt:  MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAA
TCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATGA
TTTGTGGGCCCTACATATATTATAATGTGAAACTGAAAAGTAAGCATTCTAAAAATGATGATATTTTGGTGATTTACCTCCCAGCTATTGCATTCATGCCTCAGTTACCT
GAATGGTTAGGTACCTACGAAGACAGCACCTGGATGATATATTATGCTTTGGAAGATGATGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGATCTATATGTGTGGCTTGTATCATTCTTCGTCCTCATAGCTCTTCTGATAGTCCTTGTCTATCAGCTCATGTGCTTGGCGGATCTCGAGTTTGATTATATCAA
TCCTTATGACTCTGCTTCTCGAATTAATAAAGTGATTATGCCGGAGTTCATTTCTATGGGAGTTTTGTGCCTCTTCTATCTTTTAACGGGGCATTGGGGTATGTCAATGA
TTTGTGGGCCCTACATATATTATAATGTGAAACTGAAAAGTAAGCATTCTAAAAATGATGATATTTTGGTGATTTACCTCCCAGCTATTGCATTCATGCCTCAGTTACCT
GAATGGTTAGGTACCTACGAAGACAGCACCTGGATGATATATTATGCTTTGGAAGATGATGAATGA
Protein sequenceShow/hide protein sequence
MGDLYVWLVSFFVLIALLIVLVYQLMCLADLEFDYINPYDSASRINKVIMPEFISMGVLCLFYLLTGHWGMSMICGPYIYYNVKLKSKHSKNDDILVIYLPAIAFMPQLP
EWLGTYEDSTWMIYYALEDDE