; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016061 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016061
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold6:41653279..41670558
RNA-Seq ExpressionSpg016061
SyntenySpg016061
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.5e-3047.71Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GG+ YF ++EAR  IH G  + W+ SLQ R+  E + D     F  +S+F+S+RSC+LSSRC ++ +I +YSP RF RQFGFYQD+PND+G   P   L 
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  NVLCLWRMCTQRETLSQVYLPSRATKP---HTQRIT-FSCTPH--TIEAGEHH
        N+L  WR+CT+R TLS++YLP+R+ +P    TQR T +  T H    E   HH
Subjt:  NVLCLWRMCTQRETLSQVYLPSRATKP---HTQRIT-FSCTPH--TIEAGEHH

KAA0060136.1 uncharacterized protein E6C27_scaffold39G00570 [Cucumis melo var. makuwa]2.2e-3472.28Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GGAKY+ + EAR HIH  KYVSW+  LQA+N  ELL DDG L+ W +SFFISIR CFL S+ GSS VIE YSPCRF RQFGFYQD+P DLGKKIPKANLA
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  N
        N
Subjt:  N

TYK08451.1 uncharacterized protein E5676_scaffold654G00670 [Cucumis melo var. makuwa]4.9e-4267.72Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GGAKY+ + EAR HIHK KYVSW+  LQA+N  ELL DDG L+ W +SFFISIR CFL S+ GSS VIE YSPCRF RQFGFYQD+P DLGKKIPKANLA
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  NVLCLWRMCTQRETLSQVYLPSRATKP
        NV   W +C +  TLSQVYLP+    P
Subjt:  NVLCLWRMCTQRETLSQVYLPSRATKP

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]2.0e-4366.67Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GGAKY+ + EAR HIHKGKYVSW+  L  +N  ELL DDG+L+ W +SFFISIRSCFLSS+CGSS VIE YSPCRFSRQFGFYQD+P DLG++IP+AN  
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  NVLCLWRMCTQRETLSQVYLPSRATKPHT
        NV   W +C +  TLSQVYLP  A  P T
Subjt:  NVLCLWRMCTQRETLSQVYLPSRATKPHT

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.0e-4366.67Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GGAKY+ + EAR HIHKGKYVSW+  L  +N  ELL DDG+L+ W +SFFISIRSCFLSS+CGSS VIE YSPCRFSRQFGFYQD+P DLG++IP+AN  
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  NVLCLWRMCTQRETLSQVYLPSRATKPHT
        NV   W +C +  TLSQVYLP  A  P T
Subjt:  NVLCLWRMCTQRETLSQVYLPSRATKPHT

TrEMBL top hitse value%identityAlignment
A0A5A7TJC9 Reverse transcriptase2.3e-2953.49Show/hide
Query:  FLSGGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKA
        F  GGA Y+ +  A  HI+KGKYVSW+V LQ +N  ELLKDDG L++W +SFF+SIRSCFLSS+CGSSMVIE+YSP  FSR+  FYQD+P DL +K+ +A
Subjt:  FLSGGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKA

Query:  NLANVLCLWRMCTQRETLSQVYLPSRATK
        + A      +  T   + +  Y+ S+ TK
Subjt:  NLANVLCLWRMCTQRETLSQVYLPSRATK

A0A5A7TX42 Uncharacterized protein7.1e-3147.71Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GG+ YF ++EAR  IH G  + W+ SLQ R+  E + D     F  +S+F+S+RSC+LSSRC ++ +I +YSP RF RQFGFYQD+PND+G   P   L 
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  NVLCLWRMCTQRETLSQVYLPSRATKP---HTQRIT-FSCTPH--TIEAGEHH
        N+L  WR+CT+R TLS++YLP+R+ +P    TQR T +  T H    E   HH
Subjt:  NVLCLWRMCTQRETLSQVYLPSRATKP---HTQRIT-FSCTPH--TIEAGEHH

A0A5A7V0Y4 Uncharacterized protein1.1e-3472.28Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GGAKY+ + EAR HIH  KYVSW+  LQA+N  ELL DDG L+ W +SFFISIR CFL S+ GSS VIE YSPCRF RQFGFYQD+P DLGKKIPKANLA
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  N
        N
Subjt:  N

A0A5D3C9B7 Uncharacterized protein2.4e-4267.72Show/hide
Query:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA
        GGAKY+ + EAR HIHK KYVSW+  LQA+N  ELL DDG L+ W +SFFISIR CFL S+ GSS VIE YSPCRF RQFGFYQD+P DLGKKIPKANLA
Subjt:  GGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLA

Query:  NVLCLWRMCTQRETLSQVYLPSRATKP
        NV   W +C +  TLSQVYLP+    P
Subjt:  NVLCLWRMCTQRETLSQVYLPSRATKP

A0A5D3D3U4 Reverse transcriptase2.3e-2953.49Show/hide
Query:  FLSGGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKA
        F  GGA Y+ +  A  HI+KGKYVSW+V LQ +N  ELLKDDG L++W +SFF+SIRSCFLSS+CGSSMVIE+YSP  FSR+  FYQD+P DL +K+ +A
Subjt:  FLSGGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLKDDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKA

Query:  NLANVLCLWRMCTQRETLSQVYLPSRATK
        + A      +  T   + +  Y+ S+ TK
Subjt:  NLANVLCLWRMCTQRETLSQVYLPSRATK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGGGCACGCAAGCCAATTCCTTTGAGAAGTCAGCATTCTCAGCCTATAAAAATGGCCCAACTGCCAGATGAAGGAGGACGACGGAGAGAGAAAGGAAAGCAGAA
AAGAAGACATAGAGTCCCAGTGCAGCTTTCTCGCTTGCGATATAATGTATTGCGTTGTCTCAACAGCGTGATCGCTTTCAAATCCCTGGCAAATCGTGGATTTCTTTCTG
GTGGGGCTAAGTACTTTGACGATTTTGAAGCTCGTGTACATATTCACAAGGGTAAATATGTGTCGTGGTATGTGAGTCTTCAAGCCAGAAATACAGGCGAGCTTCTAAAA
GATGACGGGAAATTGTTGTTTTGGCTTTCTTCATTCTTCATAAGCATTCGATCGTGCTTCTTATCTTCACGGTGTGGATCGTCGATGGTTATTGAAGCTTATAGTCCTTG
TCGATTTAGTCGACAATTTGGATTCTATCAAGACATACCGAATGACTTGGGTAAAAAGATTCCTAAGGCAAACTTAGCCAATGTGTTATGTCTTTGGAGGATGTGCACTC
AAAGAGAAACATTATCTCAAGTGTACCTTCCTTCTCGTGCAACAAAACCACACACTCAGCGCATCACATTTTCTTGCACTCCCCACACCATTGAAGCTGGAGAGCATCAT
AGTCCACCTTATTTTGTGAGTCTAGATGTTTTTGATACTATGGCTGCGCGTGTGGCCAATTTCAAAGTGCTGATGGATAGAGTTGTGACTCAATCTTGTCATCATGTAAC
TGATGAGATTCTTGGACAAATAAAGACAACAACACATGCAGCTGCGTATAAGATGGACAGAAATATATCTACAGTGAGGGGAGTGCAGCTACGGGCTATAATGGAGTGTC
CGGGACAAGGCTGGGTACCTTATCCTAGTGACACTATGGATGCGACCTACTTTACGAACGAGGCAAACGTCGTGATCTTGGATCGTTCATGTAGAGACATAGGATCTCAC
AATCCGTTCCAAAGGCTTGAGGATAGCAAGGAAGATCAAGTGGTGGTTCGTGACAAGTTGTCGTATCAGCAGGATCCTCCCGGAACTCTGGATCTTTTGGAATGTGCTAC
CGATCAAGCACTAGGCAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGGGCACGCAAGCCAATTCCTTTGAGAAGTCAGCATTCTCAGCCTATAAAAATGGCCCAACTGCCAGATGAAGGAGGACGACGGAGAGAGAAAGGAAAGCAGAA
AAGAAGACATAGAGTCCCAGTGCAGCTTTCTCGCTTGCGATATAATGTATTGCGTTGTCTCAACAGCGTGATCGCTTTCAAATCCCTGGCAAATCGTGGATTTCTTTCTG
GTGGGGCTAAGTACTTTGACGATTTTGAAGCTCGTGTACATATTCACAAGGGTAAATATGTGTCGTGGTATGTGAGTCTTCAAGCCAGAAATACAGGCGAGCTTCTAAAA
GATGACGGGAAATTGTTGTTTTGGCTTTCTTCATTCTTCATAAGCATTCGATCGTGCTTCTTATCTTCACGGTGTGGATCGTCGATGGTTATTGAAGCTTATAGTCCTTG
TCGATTTAGTCGACAATTTGGATTCTATCAAGACATACCGAATGACTTGGGTAAAAAGATTCCTAAGGCAAACTTAGCCAATGTGTTATGTCTTTGGAGGATGTGCACTC
AAAGAGAAACATTATCTCAAGTGTACCTTCCTTCTCGTGCAACAAAACCACACACTCAGCGCATCACATTTTCTTGCACTCCCCACACCATTGAAGCTGGAGAGCATCAT
AGTCCACCTTATTTTGTGAGTCTAGATGTTTTTGATACTATGGCTGCGCGTGTGGCCAATTTCAAAGTGCTGATGGATAGAGTTGTGACTCAATCTTGTCATCATGTAAC
TGATGAGATTCTTGGACAAATAAAGACAACAACACATGCAGCTGCGTATAAGATGGACAGAAATATATCTACAGTGAGGGGAGTGCAGCTACGGGCTATAATGGAGTGTC
CGGGACAAGGCTGGGTACCTTATCCTAGTGACACTATGGATGCGACCTACTTTACGAACGAGGCAAACGTCGTGATCTTGGATCGTTCATGTAGAGACATAGGATCTCAC
AATCCGTTCCAAAGGCTTGAGGATAGCAAGGAAGATCAAGTGGTGGTTCGTGACAAGTTGTCGTATCAGCAGGATCCTCCCGGAACTCTGGATCTTTTGGAATGTGCTAC
CGATCAAGCACTAGGCAACTGA
Protein sequenceShow/hide protein sequence
MVGARKPIPLRSQHSQPIKMAQLPDEGGRRREKGKQKRRHRVPVQLSRLRYNVLRCLNSVIAFKSLANRGFLSGGAKYFDDFEARVHIHKGKYVSWYVSLQARNTGELLK
DDGKLLFWLSSFFISIRSCFLSSRCGSSMVIEAYSPCRFSRQFGFYQDIPNDLGKKIPKANLANVLCLWRMCTQRETLSQVYLPSRATKPHTQRITFSCTPHTIEAGEHH
SPPYFVSLDVFDTMAARVANFKVLMDRVVTQSCHHVTDEILGQIKTTTHAAAYKMDRNISTVRGVQLRAIMECPGQGWVPYPSDTMDATYFTNEANVVILDRSCRDIGSH
NPFQRLEDSKEDQVVVRDKLSYQQDPPGTLDLLECATDQALGN