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Spg016073 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016073
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCACTA en-spm transposon protein
Genome locationscaffold6:40081925..40085961
RNA-Seq ExpressionSpg016073
SyntenySpg016073
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_020253546.1 uncharacterized protein LOC109830640 isoform X3 [Asparagus officinalis]7.4e-0729.84Show/hide
Query:  SSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLLIGDPEVANTRPHKNV-TQEDWN
        + +VRG + GV  D++      ++ V+ T E G+P G  A MF  EI    R++ PL   K K I K  + N+++R+     E A    H+ V TQE+W 
Subjt:  SSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLLIGDPEVANTRPHKNV-TQEDWN

Query:  MLNDRWETPDWKDSTRDSVADSTR
         L   + +  +K  +  +V + ++
Subjt:  MLNDRWETPDWKDSTRDSVADSTR

XP_022159083.1 uncharacterized protein LOC111025525 [Momordica charantia]1.6e-0930Show/hide
Query:  EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL--------------
        E ++  +  ++ +G + G  L R++   G ++ + WT +QG+PVG  +  F +EI  L+R++I  K  KKK+I       I++ LL              
Subjt:  EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL--------------

Query:  -----IG------------------DPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR
             IG                  DP  A  +P+K++ QE WN+L DRWE+P WK+ S R+ +A S  R
Subjt:  -----IG------------------DPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR

XP_038895319.1 uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]7.9e-1736.31Show/hide
Query:  NEDDIV---EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL-----
        N DD V     ++      +VRG S GV L++   AT  R+ V+WTP QGKP+G +A++F  EI  L R FIPLKY K+KDIP E+   + E+LL     
Subjt:  NEDDIV---EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL-----

Query:  --------------------------------IGDPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR
                                          DP  A   P+K  T +DWN+L DRWE+  WK+ S R+ V+ S  R
Subjt:  --------------------------------IGDPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR

XP_038895320.1 uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida]7.9e-1736.31Show/hide
Query:  NEDDIV---EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL-----
        N DD V     ++      +VRG S GV L++   AT  R+ V+WTP QGKP+G +A++F  EI  L R FIPLKY K+KDIP E+   + E+LL     
Subjt:  NEDDIV---EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL-----

Query:  --------------------------------IGDPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR
                                          DP  A   P+K  T +DWN+L DRWE+  WK+ S R+ V+ S  R
Subjt:  --------------------------------IGDPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR

XP_038895321.1 uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]7.9e-1736.31Show/hide
Query:  NEDDIV---EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL-----
        N DD V     ++      +VRG S GV L++   AT  R+ V+WTP QGKP+G +A++F  EI  L R FIPLKY K+KDIP E+   + E+LL     
Subjt:  NEDDIV---EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL-----

Query:  --------------------------------IGDPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR
                                          DP  A   P+K  T +DWN+L DRWE+  WK+ S R+ V+ S  R
Subjt:  --------------------------------IGDPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR

TrEMBL top hitse value%identityAlignment
A0A5A7T3V0 CACTA en-spm transposon protein1.5e-0531.13Show/hide
Query:  GVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLLIGDPEVANTRPHKNVTQEDWNMLNDRW
        G    + LD+ ++  G +V +  + E+GKPV   A     +I    R+ IPL    +K +P +V   +++R                +T EDWNM+ DRW
Subjt:  GVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLLIGDPEVANTRPHKNVTQEDWNMLNDRW

Query:  ETPDWK
        ET  WK
Subjt:  ETPDWK

A0A5A7TRX4 DUF4216 domain-containing protein6.3e-0425Show/hide
Query:  DDIVEMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIP---KEVMMNIVERLLIGDPE--
        D+  ++  + S    VRG    + LD+ ++  G ++ +    E+GKPV   A      I    R+ IPL     K +P   +E++++ +E     DP   
Subjt:  DDIVEMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIP---KEVMMNIVERLLIGDPE--

Query:  --------------------------------VANTRPHKNVTQEDWNMLNDRWETPDWK
                                         A   P   +T EDWNM+ DRWET  WK
Subjt:  --------------------------------VANTRPHKNVTQEDWNMLNDRWETPDWK

A0A5D3B974 DUF4216 domain-containing protein1.5e-0531.13Show/hide
Query:  GVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLLIGDPEVANTRPHKNVTQEDWNMLNDRW
        G    + LD+ ++  G +V +  + E+GKPV   A     +I    R+ IPL    +K +P +V   +++R                +T EDWNM+ DRW
Subjt:  GVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLLIGDPEVANTRPHKNVTQEDWNMLNDRW

Query:  ETPDWK
        ET  WK
Subjt:  ETPDWK

A0A6J1DXU5 uncharacterized protein LOC1110255257.7e-1030Show/hide
Query:  EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL--------------
        E ++  +  ++ +G + G  L R++   G ++ + WT +QG+PVG  +  F +EI  L+R++I  K  KKK+I       I++ LL              
Subjt:  EMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLL--------------

Query:  -----IG------------------DPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR
             IG                  DP  A  +P+K++ QE WN+L DRWE+P WK+ S R+ +A S  R
Subjt:  -----IG------------------DPEVANTRPHKNVTQEDWNMLNDRWETPDWKD-STRDSVADSTRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCAAATAACGAGGACGATATTGTAGAAATGGATGAGGCATACTCTCACAGTTCCCAAGTTCGTGGAGTTTCCTGTGGGGTTGGTCTTGATAGGATTATTAAGGC
CACTGGTGAAAGAGTTTCTGTTTCATGGACTCCAGAGCAAGGTAAACCTGTTGGACGAGTAGCAAATATGTTCAAGACTGAAATTGATTGTCTATCGAGGAGTTTCATCC
CTTTAAAGTACCATAAGAAGAAAGACATTCCAAAAGAAGTCATGATGAACATAGTAGAGAGGTTGTTGATTGGTGATCCAGAAGTAGCTAATACACGTCCACACAAGAAT
GTTACTCAGGAAGATTGGAACATGTTGAATGATAGATGGGAGACTCCCGATTGGAAGGATTCCACGCGAGATTCAGTGGCAGATTCGACTCGGCGGCAGATTCCACAGCG
AGATTCGGCTGATTCAACGGCAGATGTGTGTGGGACTTCGACGACAGATGAGCTTCGACGGCAAGACGTGTGTGGGACTTCAGTTGAAATCGAGGGGAAGTGTGTTGGAG
GCACCGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCAAATAACGAGGACGATATTGTAGAAATGGATGAGGCATACTCTCACAGTTCCCAAGTTCGTGGAGTTTCCTGTGGGGTTGGTCTTGATAGGATTATTAAGGC
CACTGGTGAAAGAGTTTCTGTTTCATGGACTCCAGAGCAAGGTAAACCTGTTGGACGAGTAGCAAATATGTTCAAGACTGAAATTGATTGTCTATCGAGGAGTTTCATCC
CTTTAAAGTACCATAAGAAGAAAGACATTCCAAAAGAAGTCATGATGAACATAGTAGAGAGGTTGTTGATTGGTGATCCAGAAGTAGCTAATACACGTCCACACAAGAAT
GTTACTCAGGAAGATTGGAACATGTTGAATGATAGATGGGAGACTCCCGATTGGAAGGATTCCACGCGAGATTCAGTGGCAGATTCGACTCGGCGGCAGATTCCACAGCG
AGATTCGGCTGATTCAACGGCAGATGTGTGTGGGACTTCGACGACAGATGAGCTTCGACGGCAAGACGTGTGTGGGACTTCAGTTGAAATCGAGGGGAAGTGTGTTGGAG
GCACCGATTGA
Protein sequenceShow/hide protein sequence
MLSNNEDDIVEMDEAYSHSSQVRGVSCGVGLDRIIKATGERVSVSWTPEQGKPVGRVANMFKTEIDCLSRSFIPLKYHKKKDIPKEVMMNIVERLLIGDPEVANTRPHKN
VTQEDWNMLNDRWETPDWKDSTRDSVADSTRRQIPQRDSADSTADVCGTSTTDELRRQDVCGTSVEIEGKCVGGTD