; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016093 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016093
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein UPSTREAM OF FLC-like
Genome locationscaffold6:43454103..43456718
RNA-Seq ExpressionSpg016093
SyntenySpg016093
Gene Ontology termsGO:0051258 - protein polymerization (biological process)
GO:0051302 - regulation of cell division (biological process)
GO:0090708 - specification of plant organ axis polarity (biological process)
GO:2000067 - regulation of root morphogenesis (biological process)
GO:0031234 - extrinsic component of cytoplasmic side of plasma membrane (cellular component)
InterPro domainsIPR010369 - Protein SOSEKI


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583462.1 Protein UPSTREAM OF FLC, partial [Cucurbita argyrosperma subsp. sororia]5.0e-4381.75Show/hide
Query:  TDEKHRRRRRVARGEE-KGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSI
        TDEKHRRRRR  R EE K EKE EEVHGESNPT STEL+ EEISPP SDSSPETLESLMKADGRLII EAANANRT ESF SGRM+ASAVLMQLISCGS+
Subjt:  TDEKHRRRRRVARGEE-KGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSI

Query:  SFKDCGATSMEDQEFGLVGSCKSRAP
        SFKDC A S+ +QEF LVG CKSR P
Subjt:  SFKDCGATSMEDQEFGLVGSCKSRAP

XP_022948402.1 protein UPSTREAM OF FLC-like [Cucurbita moschata]8.5e-4382.68Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS
        TDEKHRRRRRV R EEK EKE EEV+GESN T STELSREEISPP SD SPETLESLMKADGRLII EA N NRT ESF SGRMKASAVLMQLISCGSIS
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS

Query:  FKDCGATSMEDQEFGLVGSCKSRAPCG
        FKDCGATSME QEF +   CKSR P G
Subjt:  FKDCGATSMEDQEFGLVGSCKSRAPCG

XP_022998737.1 protein UPSTREAM OF FLC-like [Cucurbita maxima]2.9e-4383.46Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS
        TDEKHRRRRRV   EEK EKE EEVHGESN T STELSREEISPP SD SPETLESLMKADGRLII EA N NRT ESF SGRMKASAVLMQLISCGSIS
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS

Query:  FKDCGATSMEDQEFGLVGSCKSRAPCG
        FKDCGATSME QEF L   CKSR P G
Subjt:  FKDCGATSMEDQEFGLVGSCKSRAPCG

XP_023519054.1 protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo]2.2e-4382.54Show/hide
Query:  TDEKHRRRRRVARGEEK-GEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSI
        TDEKHRRRRR  R EEK  EKE EEVHGESNPT STEL+ EEISPP SDSSPETLESLMKADGRLII EAANANRT ESF SGRM+ASAVLMQLISCGS+
Subjt:  TDEKHRRRRRVARGEEK-GEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSI

Query:  SFKDCGATSMEDQEFGLVGSCKSRAP
        SFKDC A S+ DQEF LVG CKSR P
Subjt:  SFKDCGATSMEDQEFGLVGSCKSRAP

XP_023523042.1 protein UPSTREAM OF FLC-like [Cucurbita pepo subsp. pepo]1.0e-4384.25Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS
        TDEKHRRRRRV R EEK EKEIEEV+GESN T STELSREEISPP SD SPETLESLMKADGRLII EA N NRT ESF SGRMKASAVLMQLISCGSIS
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS

Query:  FKDCGATSMEDQEFGLVGSCKSRAPCG
        FKDCGATSME QEF L   CKSR P G
Subjt:  FKDCGATSMEDQEFGLVGSCKSRAPCG

TrEMBL top hitse value%identityAlignment
A0A6J1E0L9 protein UPSTREAM OF FLC3.0e-3880.77Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANA---NRTVESFSSGRMKASAVLMQLISCG
        TDEK RRRRR AR EEK EKE EE+    NPT STELSREEISPP SDSSPETLESLMKADGRLII E+AN    NRT ESF SGRMKASAVLMQLISCG
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANA---NRTVESFSSGRMKASAVLMQLISCG

Query:  SISFKDCGATSMEDQEFGLVGSCKSRAPCG
        SISFKDCGATSMEDQEF LVG  KSRA  G
Subjt:  SISFKDCGATSMEDQEFGLVGSCKSRAPCG

A0A6J1G949 protein UPSTREAM OF FLC-like4.1e-4382.68Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS
        TDEKHRRRRRV R EEK EKE EEV+GESN T STELSREEISPP SD SPETLESLMKADGRLII EA N NRT ESF SGRMKASAVLMQLISCGSIS
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS

Query:  FKDCGATSMEDQEFGLVGSCKSRAPCG
        FKDCGATSME QEF +   CKSR P G
Subjt:  FKDCGATSMEDQEFGLVGSCKSRAPCG

A0A6J1HPC6 protein UPSTREAM OF FLC-like7.0e-4381.75Show/hide
Query:  TDEKHRRRRRVARGEE-KGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSI
        TDEKHRRRRR  R EE K EKE EEVHGESNPT STEL+ EEISPP SDSSPETLESLMKADGRLII EAANANRT ESF SGRM+ASAVLMQLISCGS+
Subjt:  TDEKHRRRRRVARGEE-KGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSI

Query:  SFKDCGATSMEDQEFGLVGSCKSRAP
        SFKDC A S+ DQEF LVG CKS  P
Subjt:  SFKDCGATSMEDQEFGLVGSCKSRAP

A0A6J1HZ99 protein UPSTREAM OF FLC-like3.5e-4280.8Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS
        TDEKHRRRRR  R E   +KE EEVHGESNPT STEL+ EEISPP SDSSPETLESLMKADGRLII EA NANRT ESF SGRM+ASAVLMQLISCGS+S
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS

Query:  FKDCGATSMEDQEFGLVGSCKSRAP
        FKDC A SM DQEF LVG CKSR P
Subjt:  FKDCGATSMEDQEFGLVGSCKSRAP

A0A6J1K8T0 protein UPSTREAM OF FLC-like1.4e-4383.46Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS
        TDEKHRRRRRV   EEK EKE EEVHGESN T STELSREEISPP SD SPETLESLMKADGRLII EA N NRT ESF SGRMKASAVLMQLISCGSIS
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSIS

Query:  FKDCGATSMEDQEFGLVGSCKSRAPCG
        FKDCGATSME QEF L   CKSR P G
Subjt:  FKDCGATSMEDQEFGLVGSCKSRAPCG

SwissProt top hitse value%identityAlignment
Q8GY65 Protein SOSEKI 41.4e-1656.76Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMKADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGS
        TD++ RR+  V         E+ EV         TELSREEI SPP SDSSPETLESLM+ADGRLI+L E    NRTVE     +M+ SAVLMQLISCG+
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMKADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGS

Query:  ISFKDCGATSM
        +SFK CG T M
Subjt:  ISFKDCGATSM

Q8GYT8 Protein SOSEKI 32.1e-0436.11Show/hide
Query:  IEEVHGESNPTSSTELSREEISPPSSDSS------PETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFG
        + E         S E+SR  +SPP S+S+       +TLESL++AD   +          V   +  R++AS +LMQLISCGSIS K        D  FG
Subjt:  IEEVHGESNPTSSTELSREEISPPSSDSS------PETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFG

Query:  LVGSCKSR
        LV + K +
Subjt:  LVGSCKSR

Q9FJF5 Protein SOSEKI 58.3e-2559.5Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHG-ESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLII--LEAANANRTVESFSSGRMKASAVLMQLISCG
        TD++ RRRR         ++EIEEV    S    STELSR+EISPP SDSSPETLE+L+KADGRLI+   E++  +RTVES SSGRM+ASAVLMQLISCG
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHG-ESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLII--LEAANANRTVESFSSGRMKASAVLMQLISCG

Query:  SISFKDCGATSMEDQEFGLVG
        ++SFK+CG   ++DQ   L G
Subjt:  SISFKDCGATSMEDQEFGLVG

Arabidopsis top hitse value%identityAlignment
AT2G28150.1 Domain of unknown function (DUF966)1.5e-0536.11Show/hide
Query:  IEEVHGESNPTSSTELSREEISPPSSDSS------PETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFG
        + E         S E+SR  +SPP S+S+       +TLESL++AD   +          V   +  R++AS +LMQLISCGSIS K        D  FG
Subjt:  IEEVHGESNPTSSTELSREEISPPSSDSS------PETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISCGSISFKDCGATSMEDQEFG

Query:  LVGSCKSR
        LV + K +
Subjt:  LVGSCKSR

AT3G46110.1 Domain of unknown function (DUF966)1.0e-1756.76Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMKADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGS
        TD++ RR+  V         E+ EV         TELSREEI SPP SDSSPETLESLM+ADGRLI+L E    NRTVE     +M+ SAVLMQLISCG+
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMKADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGS

Query:  ISFKDCGATSM
        +SFK CG T M
Subjt:  ISFKDCGATSM

AT3G46110.2 Domain of unknown function (DUF966)1.0e-1756.76Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMKADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGS
        TD++ RR+  V         E+ EV         TELSREEI SPP SDSSPETLESLM+ADGRLI+L E    NRTVE     +M+ SAVLMQLISCG+
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEI-SPPSSDSSPETLESLMKADGRLIIL-EAANANRTVESFSSGRMKASAVLMQLISCGS

Query:  ISFKDCGATSM
        +SFK CG T M
Subjt:  ISFKDCGATSM

AT5G59790.1 Domain of unknown function (DUF966)5.9e-2659.5Show/hide
Query:  TDEKHRRRRRVARGEEKGEKEIEEVHG-ESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLII--LEAANANRTVESFSSGRMKASAVLMQLISCG
        TD++ RRRR         ++EIEEV    S    STELSR+EISPP SDSSPETLE+L+KADGRLI+   E++  +RTVES SSGRM+ASAVLMQLISCG
Subjt:  TDEKHRRRRRVARGEEKGEKEIEEVHG-ESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLII--LEAANANRTVESFSSGRMKASAVLMQLISCG

Query:  SISFKDCGATSMEDQEFGLVG
        ++SFK+CG   ++DQ   L G
Subjt:  SISFKDCGATSMEDQEFGLVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCTCTCAAGCCGTCTCGTTCCTTTAGGGAGGACGGGACCGACGAGAAGCACCGGCGGAGGAGACGAGTGGCGAGGGGAGAAGAGAAGGGAGAGAAGGAAATAGA
GGAGGTTCATGGTGAATCAAACCCTACGTCGAGTACAGAGCTCAGTAGAGAAGAAATTTCTCCTCCGTCGTCGGATTCGAGCCCCGAAACTCTCGAATCTCTGATGAAAG
CCGACGGACGTTTGATCATTTTGGAAGCTGCAAACGCGAATCGGACGGTGGAGAGTTTTTCGAGCGGGAGGATGAAGGCCTCAGCCGTTCTGATGCAATTGATTTCATGT
GGATCGATCTCGTTCAAGGACTGTGGAGCAACATCAATGGAGGATCAAGAATTTGGCCTCGTTGGTTCCTGTAAATCCAGAGCGCCTTGTGGAGGGACCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAACCTCTCAAGCCGTCTCGTTCCTTTAGGGAGGACGGGACCGACGAGAAGCACCGGCGGAGGAGACGAGTGGCGAGGGGAGAAGAGAAGGGAGAGAAGGAAATAGA
GGAGGTTCATGGTGAATCAAACCCTACGTCGAGTACAGAGCTCAGTAGAGAAGAAATTTCTCCTCCGTCGTCGGATTCGAGCCCCGAAACTCTCGAATCTCTGATGAAAG
CCGACGGACGTTTGATCATTTTGGAAGCTGCAAACGCGAATCGGACGGTGGAGAGTTTTTCGAGCGGGAGGATGAAGGCCTCAGCCGTTCTGATGCAATTGATTTCATGT
GGATCGATCTCGTTCAAGGACTGTGGAGCAACATCAATGGAGGATCAAGAATTTGGCCTCGTTGGTTCCTGTAAATCCAGAGCGCCTTGTGGAGGGACCTATTAG
Protein sequenceShow/hide protein sequence
MEPLKPSRSFREDGTDEKHRRRRRVARGEEKGEKEIEEVHGESNPTSSTELSREEISPPSSDSSPETLESLMKADGRLIILEAANANRTVESFSSGRMKASAVLMQLISC
GSISFKDCGATSMEDQEFGLVGSCKSRAPCGGTY