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Spg016094 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016094
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionubiquitin extension protein 1
Genome locationscaffold6:42708473..42713382
RNA-Seq ExpressionSpg016094
SyntenySpg016094
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G36170.1 Ubiquitin supergroup;Ribosomal protein L40e7.0e-0453.85Show/hide
Query:  NSAVKPTLHLVLKLLDSTIESFLMSLDRKYSEDKIICYK
        N   + TLHLVL+L    IE  LM L RKY++DK+IC K
Subjt:  NSAVKPTLHLVLKLLDSTIESFLMSLDRKYSEDKIICYK
AT3G52590.1 ubiquitin extension protein 17.0e-0453.85Show/hide
Query:  NSAVKPTLHLVLKLLDSTIESFLMSLDRKYSEDKIICYK
        N   + TLHLVL+L    IE  LM L RKY++DK+IC K
Subjt:  NSAVKPTLHLVLKLLDSTIESFLMSLDRKYSEDKIICYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCTCTCTAATCCCACCCGTTTCTCCCTCAGTCCCGATCTTCTTCTGACAGCAAGCTCAACAGCAGCATGTAGAAGTCATTTATGCGTCGCTCGGCTCGTGGGTCA
CCTTGGATTTGTGTGGGTCAGAGCGAACACCAAGCTTTTATCCCAATTTCTACCATTTCAAGGGAACTCGGCTGTGAAACCCACTCTGCACTTAGTGCTCAAGCTTCTAG
ACAGTACTATTGAGTCATTTTTAATGTCATTGGATAGGAAGTACAGTGAGGATAAGATAATCTGCTACAAGATGATATGTCTTCCTCTTTCTTTGATTATTTTAGGTGAT
GTCCTGAGCTGTTTTGTTGAGACTACTCAGGCTAGAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCTCTCTAATCCCACCCGTTTCTCCCTCAGTCCCGATCTTCTTCTGACAGCAAGCTCAACAGCAGCATGTAGAAGTCATTTATGCGTCGCTCGGCTCGTGGGTCA
CCTTGGATTTGTGTGGGTCAGAGCGAACACCAAGCTTTTATCCCAATTTCTACCATTTCAAGGGAACTCGGCTGTGAAACCCACTCTGCACTTAGTGCTCAAGCTTCTAG
ACAGTACTATTGAGTCATTTTTAATGTCATTGGATAGGAAGTACAGTGAGGATAAGATAATCTGCTACAAGATGATATGTCTTCCTCTTTCTTTGATTATTTTAGGTGAT
GTCCTGAGCTGTTTTGTTGAGACTACTCAGGCTAGAGTTTAA
Protein sequenceShow/hide protein sequence
MSLSNPTRFSLSPDLLLTASSTAACRSHLCVARLVGHLGFVWVRANTKLLSQFLPFQGNSAVKPTLHLVLKLLDSTIESFLMSLDRKYSEDKIICYKMICLPLSLIILGD
VLSCFVETTQARV