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Spg016098 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016098
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationscaffold6:40231086..40237211
RNA-Seq ExpressionSpg016098
SyntenySpg016098
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_030494874.1 uncharacterized protein LOC115710657 [Cannabis sativa]2.6e-0965.45Show/hide
Query:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV
        + +N A IQS  AS+R LELQ+G LANELKARP+G LPSDTE+PRR+GKEQ   +
Subjt:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV

XP_030504828.1 uncharacterized protein LOC115719782 [Cannabis sativa]6.8e-1067.27Show/hide
Query:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV
        + +N A IQS  AS+R LELQ+G LANELKARP+G LPSDTE+PRR+GKEQ K +
Subjt:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV

XP_030505184.1 uncharacterized protein LOC115720166 [Cannabis sativa]3.4e-0965.45Show/hide
Query:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV
        + +N A IQS  A +R LELQ+G LANELKARP+G LPSDTE+PRR+GKEQ K +
Subjt:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV

XP_030505532.1 uncharacterized protein LOC115720524 [Cannabis sativa]1.3e-0870Show/hide
Query:  AAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV
        A IQS  AS+R LELQ+G LANELKARP+G LPSDT++PRR+GKEQ K +
Subjt:  AAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV

XP_030509265.1 uncharacterized protein LOC115723943 [Cannabis sativa]1.7e-0851.76Show/hide
Query:  FRRRRREQRRNQNPMDDVSRLPQVPEDPVNLQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV
        F ++ R  +  QN     S L  +  D   + +N A IQS  AS+R LELQ+G LANELKARP+G LPSDTE+PRR+GKEQ K +
Subjt:  FRRRRREQRRNQNPMDDVSRLPQVPEDPVNLQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV

TrEMBL top hitse value%identityAlignment
A0A6J1DWK1 uncharacterized protein LOC1110250533.4e-0756.92Show/hide
Query:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVK----RVGIWLPP
        +  N A +QS  AS+R LELQVGQLA +LK+RP G LPSDTE P+R+ KEQ      R G  LPP
Subjt:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVK----RVGIWLPP

A0A6J1DXH8 uncharacterized protein LOC1110254741.1e-0857.89Show/hide
Query:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRVGI
        + +N+A +QS   S+R LE+Q+GQ+AN+LK RP G LPSDTE+P+REGKEQ K + I
Subjt:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRVGI

A0A6J1G7Q6 uncharacterized protein LOC1114515981.2e-0766Show/hide
Query:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKE
        + +N A IQS Q S+R LE+QVGQLANEL+ RP GKLP+DTE P+REG E
Subjt:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKE

A0A6J1GJ68 uncharacterized protein LOC1114543446.8e-0860Show/hide
Query:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV
        + +N   IQS QAS++ LE+QVGQLA EL+ RP GKLP+DTE P+REGKEQ + +
Subjt:  LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV

A0A6J1H7K8 uncharacterized protein LOC1114611671.8e-0850Show/hide
Query:  DDVSRLPQVPEDPVN------LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV
        +  S+   +PE  +       + +N   IQS QAS+R LE+QVGQLANEL+ RP GKLPSDTE P+REG EQ + +
Subjt:  DDVSRLPQVPEDPVN------LQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGATCCAGAAATTGAAAGGACATTCAGGAGAAGAAGGAGAGAGCAGCGTAGAAATCAGAATCCAATGGATGATGTGTC
GCGTCTCCCGCAGGTTCCAGAAGATCCAGTGAACCTTCAGCAGAATCATGCCGCAATTCAAAGTAATCAAGCTTCAATAAGAGCCCTAGAATTGCAAGTAGGCCAGCTAG
CTAATGAGCTGAAGGCAAGGCCTCGAGGGAAACTTCCTTCAGATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAACGCGTGGGCATCTGGCTTCCACCTGTC
GCTCAGAGGAGATCTAACGGTCTAGCCGTTGGACAGCACATCATGCATTTACCCATCGATTCATTTTACAGTTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGATCCGCCTGGGGTGAGGTTCGAGCTTGATCCAGAAATTGAAAGGACATTCAGGAGAAGAAGGAGAGAGCAGCGTAGAAATCAGAATCCAATGGATGATGTGTC
GCGTCTCCCGCAGGTTCCAGAAGATCCAGTGAACCTTCAGCAGAATCATGCCGCAATTCAAAGTAATCAAGCTTCAATAAGAGCCCTAGAATTGCAAGTAGGCCAGCTAG
CTAATGAGCTGAAGGCAAGGCCTCGAGGGAAACTTCCTTCAGATACTGAACACCCTAGAAGGGAAGGTAAGGAGCAGGTAAAACGCGTGGGCATCTGGCTTCCACCTGTC
GCTCAGAGGAGATCTAACGGTCTAGCCGTTGGACAGCACATCATGCATTTACCCATCGATTCATTTTACAGTTGTTAG
Protein sequenceShow/hide protein sequence
MSDPPGVRFELDPEIERTFRRRRREQRRNQNPMDDVSRLPQVPEDPVNLQQNHAAIQSNQASIRALELQVGQLANELKARPRGKLPSDTEHPRREGKEQVKRVGIWLPPV
AQRRSNGLAVGQHIMHLPIDSFYSC