; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016102 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016102
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L29
Genome locationscaffold6:40201905..40207617
RNA-Seq ExpressionSpg016102
SyntenySpg016102
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002673 - Ribosomal protein L29e


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013674.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-2295.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

XP_022930218.1 60S ribosomal protein L29-1 [Cucurbita moschata]7.6e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

XP_023000055.1 60S ribosomal protein L29-1 [Cucurbita maxima]4.5e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

XP_038875270.1 60S ribosomal protein L29-1 [Benincasa hispida]7.6e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE ASEE+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

XP_038875325.1 60S ribosomal protein L29-1-like [Benincasa hispida]2.0e-2398.36Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

TrEMBL top hitse value%identityAlignment
A0A6J1CB13 60S ribosomal protein L291.8e-2296.67Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKS ETASEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

A0A6J1EUF7 60S ribosomal protein L293.7e-2398.33Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE

A0A6J1H4N3 60S ribosomal protein L296.3e-2395.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

A0A6J1KHA4 60S ribosomal protein L292.2e-2396.72Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

A0A6J1L4P4 60S ribosomal protein L296.3e-2395.08Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET SEE+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

SwissProt top hitse value%identityAlignment
P47914 60S ribosomal protein L292.3e-1476.92Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK

Q58DW3 60S ribosomal protein L294.7e-1544.35Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEEDQGIIFSIVLSCVVSLAEKRSYRYRLDLYGPLCLPRNLSY
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKH NK G    + +     S     V +L + +  + ++   G   L R    
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEEDQGIIFSIVLSCVVSLAEKRSYRYRLDLYGPLCLPRNLSY

Query:  PRPLVNEALPVAIAK
          P + +     IAK
Subjt:  PRPLVNEALPVAIAK

Q84WM0 60S ribosomal protein L29-24.4e-2183.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

Q95281 60S ribosomal protein L291.4e-1443.48Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEEDQGIIFSIVLSCVVSLAEKRSYRYRLDLYGPLCLPRNLSY
        MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKH NK G    + +     S     + +L + +  +  +   G   L R    
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEEDQGIIFSIVLSCVVSLAEKRSYRYRLDLYGPLCLPRNLSY

Query:  PRPLVNEALPVAIAK
          P + +     IAK
Subjt:  PRPLVNEALPVAIAK

Q9M7X7 60S ribosomal protein L29-12.6e-2183.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

Arabidopsis top hitse value%identityAlignment
AT3G06680.1 Ribosomal L29e protein family3.1e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

AT3G06680.2 Ribosomal L29e protein family3.1e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

AT3G06700.1 Ribosomal L29e protein family1.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

AT3G06700.2 Ribosomal L29e protein family1.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED

AT3G06700.3 Ribosomal L29e protein family1.8e-2283.61Show/hide
Query:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED
        MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE AS E+
Subjt:  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACGGCTTCTGAGGAAGACCAAGGCATTATCTTCTCGATTGTTTTATCTTGTGTTG
TTAGTCTTGCTGAAAAGCGTAGTTATAGGTATAGATTAGATTTGTATGGGCCTTTGTGTTTGCCCCGAAACTTGTCTTATCCAAGACCGTTGGTGAATGAGGCTCTTCCA
GTTGCAATCGCAAAGGCACAATATTTGAAGATAGTATCAACAATGCAACCAATCGCTTTACAAGAGACAACAGCATTTATTCTTGCAATGCAGATGGAGTGGAAGAATCG
ACTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGTCGAAGAATCACACAGCGCACAATCAGTCCCGCAAAGCCCATAAGAATGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCC
GAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACGGCTTCTGAGGAAGACCAAGGCATTATCTTCTCGATTGTTTTATCTTGTGTTG
TTAGTCTTGCTGAAAAGCGTAGTTATAGGTATAGATTAGATTTGTATGGGCCTTTGTGTTTGCCCCGAAACTTGTCTTATCCAAGACCGTTGGTGAATGAGGCTCTTCCA
GTTGCAATCGCAAAGGCACAATATTTGAAGATAGTATCAACAATGCAACCAATCGCTTTACAAGAGACAACAGCATTTATTCTTGCAATGCAGATGGAGTGGAAGAATCG
ACTATGA
Protein sequenceShow/hide protein sequence
MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEEDQGIIFSIVLSCVVSLAEKRSYRYRLDLYGPLCLPRNLSYPRPLVNEALP
VAIAKAQYLKIVSTMQPIALQETTAFILAMQMEWKNRL