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Spg016137 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016137
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprecursor of CEP1
Genome locationscaffold9:45923959..45924282
RNA-Seq ExpressionSpg016137
SyntenySpg016137
Gene Ontology termsGO:0048364 - root development (biological process)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064365.1 hypothetical protein E6C27_scaffold255G00660 [Cucumis melo var. makuwa]9.8e-2061.32Show/hide
Query:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH
        I LIS  AA L +L+   NIS+T+ RLL +E+P   +   ++HRK  ET AVAPLKS P AF   T  A  DVEV GGDFRPTT GHSPGAGHSVAP SH
Subjt:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH

Query:  VDSKIH
        +DSKIH
Subjt:  VDSKIH

KAG6591363.1 Precursor of CEP5, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2765.09Show/hide
Query:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAP--NDVEVQGGDFRPTTPGHSPGAGHSVAPESH
        + LI++   A  +L+ I NIS+T GRLL +EHP     GNLHRKI ETA VAPL SRPPAF+RT  +P   D EV GGDFRPTTPGHSPG GHS+AP SH
Subjt:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAP--NDVEVQGGDFRPTTPGHSPGAGHSVAPESH

Query:  VDSKIH
        VDSKIH
Subjt:  VDSKIH

KAG6608491.1 hypothetical protein SDJN03_01833, partial [Cucurbita argyrosperma subsp. sororia]6.3e-1959.29Show/hide
Query:  MAGINLISAAAAA-LFVLA--FISNISYTEG-RLLSM--EHPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAPNDVEVQGGDFRPTTPGHSPGAGH
        MAGINLISAAAAA L VLA  F +NI +T+G RLL M  EHP                    L SRP +F  +PIA  DV+V GGDFRPTTPGHSPGAGH
Subjt:  MAGINLISAAAAA-LFVLA--FISNISYTEG-RLLSM--EHPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAPNDVEVQGGDFRPTTPGHSPGAGH

Query:  SVAPESHVDSKIH
         +AP+SHVDSKIH
Subjt:  SVAPESHVDSKIH

KAG7024239.1 Polyadenylate-binding protein RBP47C, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-2265.22Show/hide
Query:  ALFVLAFISNISYTEGRLLSMEHPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAP--NDVEVQGGDFRPTTPGHSPGAGHSVAPESHV
        A  +L+ I NIS+T GRLL +EHP     GN HRKI ETA VAPL SRPPAF+RT  +P   D EV GGDFRPTTPGHSPG GHS+AP SH+
Subjt:  ALFVLAFISNISYTEGRLLSMEHPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAP--NDVEVQGGDFRPTTPGHSPGAGHSVAPESHV

TYK20222.1 hypothetical protein E5676_scaffold134G003590 [Cucumis melo var. makuwa]2.3e-2164.15Show/hide
Query:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH
        I LIS  AA L +L+   NIS+T+ RLL ME+P   +   +LHRK  ET AVAPLKS P AF   T  A  DVEV GGDFRPTTPGHSPGAGHSVAP SH
Subjt:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH

Query:  VDSKIH
        +DSKIH
Subjt:  VDSKIH

TrEMBL top hitse value%identityAlignment
A0A061FBY9 Uncharacterized protein isoform 11.5e-0538.46Show/hide
Query:  MAGINLISAAAAALFVLAFISNISYTEGRLLSME---HPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVA
        MA  NLI  A A L VL F   I++TE R+L  +    P G+   N+     +T     +         T  + N       DFRPTTPGHSPGAGHS  
Subjt:  MAGINLISAAAAALFVLAFISNISYTEGRLLSME---HPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVA

Query:  PESH
        P S+
Subjt:  PESH

A0A061FCV6 Uncharacterized protein isoform 21.5e-0538.83Show/hide
Query:  MAGINLISAAAAALFVLAFISNISYTEGRLLSME---HPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVA
        MA  NLI  A A L VL F   I++TE R+L  +    P G+   N+     +T     +         T  + N       DFRPTTPGHSPGAGHS  
Subjt:  MAGINLISAAAAALFVLAFISNISYTEGRLLSME---HPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVA

Query:  PES
        P S
Subjt:  PES

A0A0A0L3I5 Uncharacterized protein1.4e-1654.72Show/hide
Query:  INLISAAAAALFVLAFISNISYTEGRLLSMEH-PGGDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH
        I LIS   A L +L+   ++S+T+ R+   ++    + + +LH KI ET AVAPLKS P AF R T    ++ EV GGDFRPTTPGHSPGAGHSVAP SH
Subjt:  INLISAAAAALFVLAFISNISYTEGRLLSMEH-PGGDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH

Query:  VDSKIH
        +DSKIH
Subjt:  VDSKIH

A0A5A7VEP2 Uncharacterized protein4.7e-2061.32Show/hide
Query:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH
        I LIS  AA L +L+   NIS+T+ RLL +E+P   +   ++HRK  ET AVAPLKS P AF   T  A  DVEV GGDFRPTT GHSPGAGHSVAP SH
Subjt:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH

Query:  VDSKIH
        +DSKIH
Subjt:  VDSKIH

A0A5D3D9H8 Uncharacterized protein1.1e-2164.15Show/hide
Query:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH
        I LIS  AA L +L+   NIS+T+ RLL ME+P   +   +LHRK  ET AVAPLKS P AF   T  A  DVEV GGDFRPTTPGHSPGAGHSVAP SH
Subjt:  INLISAAAAALFVLAFISNISYTEGRLLSMEHPG-GDPTGNLHRKIFETAAVAPLKSRPPAF-RRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESH

Query:  VDSKIH
        +DSKIH
Subjt:  VDSKIH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGAATCAATCTCATCTCCGCCGCGGCTGCTGCCCTGTTCGTTTTGGCTTTTATCTCCAATATATCATACACTGAAGGAAGGTTGCTGTCAATGGAGCATCCCGG
TGGCGATCCCACCGGAAATCTCCACCGCAAAATCTTTGAAACCGCCGCCGTTGCACCTCTCAAGTCGAGGCCACCGGCATTCCGCCGCACCCCCATCGCCCCCAACGACG
TGGAGGTCCAAGGCGGCGACTTCCGTCCCACCACCCCCGGCCACAGCCCCGGCGCCGGCCACTCTGTAGCGCCAGAAAGTCACGTGGATTCGAAAATCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGAATCAATCTCATCTCCGCCGCGGCTGCTGCCCTGTTCGTTTTGGCTTTTATCTCCAATATATCATACACTGAAGGAAGGTTGCTGTCAATGGAGCATCCCGG
TGGCGATCCCACCGGAAATCTCCACCGCAAAATCTTTGAAACCGCCGCCGTTGCACCTCTCAAGTCGAGGCCACCGGCATTCCGCCGCACCCCCATCGCCCCCAACGACG
TGGAGGTCCAAGGCGGCGACTTCCGTCCCACCACCCCCGGCCACAGCCCCGGCGCCGGCCACTCTGTAGCGCCAGAAAGTCACGTGGATTCGAAAATCCATTAG
Protein sequenceShow/hide protein sequence
MAGINLISAAAAALFVLAFISNISYTEGRLLSMEHPGGDPTGNLHRKIFETAAVAPLKSRPPAFRRTPIAPNDVEVQGGDFRPTTPGHSPGAGHSVAPESHVDSKIH