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Spg016203 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016203
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDynein light chain
Genome locationscaffold9:37198293..37199911
RNA-Seq ExpressionSpg016203
SyntenySpg016203
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607846.1 hypothetical protein SDJN03_01188, partial [Cucurbita argyrosperma subsp. sororia]9.6e-4787.39Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P++   P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP

Query:  THFAALETVKG
        THF A ET+KG
Subjt:  THFAALETVKG

XP_022139644.1 dynein light chain LC6, flagellar outer arm [Momordica charantia]2.1e-4988.29Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT
        MLEGKAI+GETDMLQ MQQDALDLAAKALD+FDVTEATDIARFIKKEFDRI+GPGWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGSAGP+++EPT
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT

Query:  -HFAALETVKG
          FAALE +KG
Subjt:  -HFAALETVKG

XP_022941140.1 dynein light chain 2, cytoplasmic-like [Cucurbita moschata]2.5e-4788.29Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P++   P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP

Query:  THFAALETVKG
        THFAA ET+KG
Subjt:  THFAALETVKG

XP_022981659.1 dynein light chain 2, cytoplasmic-like [Cucurbita maxima]1.3e-4687.39Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P++   P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP

Query:  THFAALETVKG
        TH AA ET+KG
Subjt:  THFAALETVKG

XP_038899068.1 dynein light chain 2, cytoplasmic [Benincasa hispida]3.7e-4684.82Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEES---
        MLEGKAI+GETDMLQAMQQDAL+LAAKALD+FDVTEATDIARFIKKEFD+IYG GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSA  EE    
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEES---

Query:  EPTHFAALETVK
        +PT F+ +ET+K
Subjt:  EPTHFAALETVK

TrEMBL top hitse value%identityAlignment
A0A2N9J9Z2 Dynein light chain2.0e-4585.32Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT
        MLEGKA++GETDMLQ MQQDALDLAAKALD FDVTEAT+IARFIKKEFD  YGPGWQCIVGTDFGSFVTHC GCFIYFC+GSLAILLF+GSAGP E+E  
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT

Query:  HFAALETVK
         F+ALETVK
Subjt:  HFAALETVK

A0A6J1CDL8 Dynein light chain1.0e-4988.29Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT
        MLEGKAI+GETDMLQ MQQDALDLAAKALD+FDVTEATDIARFIKKEFDRI+GPGWQCIVGTDFGSFVTHCFGCFIYFCVG+LA+LLFRGSAGP+++EPT
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT

Query:  -HFAALETVKG
          FAALE +KG
Subjt:  -HFAALETVKG

A0A6J1FSQ1 Dynein light chain1.2e-4788.29Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P++   P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP

Query:  THFAALETVKG
        THFAA ET+KG
Subjt:  THFAALETVKG

A0A6J1IHC9 Dynein light chain8.8e-4681.82Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT
        MLEGKA++GETDMLQAMQQ+ALDLAAKALD+FDVTE TDIARFIKKEFD +YG GWQCIVGTDFGSFVTHC GCFIYFCVGSLA+LLF+GS+G E+  PT
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPT

Query:  HFAALETVKG
         F+ LET+KG
Subjt:  HFAALETVKG

A0A6J1J2G7 Dynein light chain6.1e-4787.39Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP
        MLEGKAIVGETDMLQAMQQDALDLAAKALD FDVTEATDIARFIKKEFDR +G GWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS  P++   P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEE-SEP

Query:  THFAALETVKG
        TH AA ET+KG
Subjt:  THFAALETVKG

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm6.8e-1952.81Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M E KA++   DM + MQQDA+D A +AL+ F++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +A+LLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

O96860 Dynein light chain 2, cytoplasmic6.8e-1952.81Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM + MQQDA+D A +AL+ +++ +  DIA FIKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q22799 Dynein light chain 1, cytoplasmic1.2e-1851.69Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M++ KA++   DM   MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q24117 Dynein light chain 1, cytoplasmic1.5e-1851.69Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM + MQQDA+D A +AL+ +++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Q3MHR3 Dynein light chain 2, cytoplasmic3.4e-1850.56Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        M + KA++   DM + MQQDA+D A +A++ +++ +  DIA +IKKEFD+ Y P W CIVG +FGS+VTH    FIYF +G +AILLF+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.0e-2253.19Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP
        MLEGKA+V ++DM   MQ  A+  A++ALD FDV +   IA  IKKEFD  YG GWQC+VG++FG F TH  G FIYF + +L  L+F+G++ P
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP

AT3G16120.1 Dynein light chain type 1 family protein2.7e-2357.14Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS
        MLEGKA V ETDM   MQ  A+ +A+++LD FDV ++  IA  IKKEFD  YG GWQC+VGT+FG F TH  G FIYF +G+L  L+F+G+
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGS

AT4G15930.1 Dynein light chain type 1 family protein1.8e-1443.53Show/hide
Query:  KAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR
        +A++   DM   MQ++A+++A  A + + V +  DIA  IKKEFD+ +G  W CIVG +FGS+VTH    F+YF +   A+LLF+
Subjt:  KAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFR

AT4G27360.1 Dynein light chain type 1 family protein9.6e-3777.42Show/hide
Query:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAG
        MLEGKA++G+TDM Q M++DAL LA+KALD FDVTE T IARFIKKEFDR YG GWQCIVGT FGSFVTHC GCFI+F VGSL ILLF+GS G
Subjt:  MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAG

AT5G20110.1 Dynein light chain type 1 family protein9.4e-1648.19Show/hide
Query:  DMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP
        DM   MQ  A   A   LD+ +   +  +A  +KKEFD+ YGP W CIVG+ FGSFVTH  GCFIYF +  L +LLF+    P
Subjt:  DMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGAAGGCAAAGCAATCGTCGGAGAGACGGATATGTTGCAGGCCATGCAGCAGGACGCTCTGGACCTTGCGGCTAAAGCCCTTGACAATTTTGATGTCACTGAAGC
CACTGACATTGCTCGGTTCATTAAGAAGGAATTTGACAGGATATATGGGCCAGGATGGCAGTGCATAGTGGGGACAGATTTTGGATCATTTGTGACACATTGTTTTGGAT
GTTTCATCTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTGTTTAGGGGCTCTGCAGGCCCAGAAGAATCTGAGCCAACTCATTTTGCTGCTTTGGAAACTGTCAAAGGA
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTTAGAAGGCAAAGCAATCGTCGGAGAGACGGATATGTTGCAGGCCATGCAGCAGGACGCTCTGGACCTTGCGGCTAAAGCCCTTGACAATTTTGATGTCACTGAAGC
CACTGACATTGCTCGGTTCATTAAGAAGGAATTTGACAGGATATATGGGCCAGGATGGCAGTGCATAGTGGGGACAGATTTTGGATCATTTGTGACACATTGTTTTGGAT
GTTTCATCTATTTTTGTGTTGGAAGCCTTGCAATTTTGCTGTTTAGGGGCTCTGCAGGCCCAGAAGAATCTGAGCCAACTCATTTTGCTGCTTTGGAAACTGTCAAAGGA
TGA
Protein sequenceShow/hide protein sequence
MLEGKAIVGETDMLQAMQQDALDLAAKALDNFDVTEATDIARFIKKEFDRIYGPGWQCIVGTDFGSFVTHCFGCFIYFCVGSLAILLFRGSAGPEESEPTHFAALETVKG