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Spg016235 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016235
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBet1-like protein
Genome locationscaffold9:42223128..42227016
RNA-Seq ExpressionSpg016235
SyntenySpg016235
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB75572.1 Bet1-like protein [Morus notabilis]2.9e-0650.75Show/hide
Query:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRP
        V+  + +A++IGTEA+ Q DFL+QL           ND DQSSSR KEQRK+IEQK+H+E ++ C P
Subjt:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRP
KAF3605451.1 hypothetical protein DY000_02047307 [Brassica cretica]3.2e-0539.29Show/hide
Query:  IAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMN
        IA++IG+EA+ Q++FLD L+        VA+D+D+S+SR KE+ K+ E ++HT+  +           L LYS++V++D+QKM+
Subjt:  IAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMN
KAG5621173.1 hypothetical protein H5410_006391 [Solanum commersonii]1.5e-0539.39Show/hide
Query:  IAQDIGTEAKSQQDFLDQL-----------IRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMNAFLT
        +AQ+I +EAK Q DF++QL              F+  +   ND+DQSSSRSKEQ +K+EQ+ H  RIK C      C  L L  I V +   ++ A L+
Subjt:  IAQDIGTEAKSQQDFLDQL-----------IRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMNAFLT
KGN60384.2 hypothetical protein Csa_001559 [Cucumis sativus]7.2e-2968.7Show/hide
Query:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFV-FCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMNAFLTFLI--
        V+  + IAQDIGTEAKSQQDFLDQLI+T V FCL  ANDID+SSS  +EQ KKIEQK+HTE IKSCRPGRRICIDLFLYSI+VV+++QKMN F  F +  
Subjt:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFV-FCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMNAFLTFLI--

Query:  MNGIPVAGLRRGKET
         N   +AG  +GKET
Subjt:  MNGIPVAGLRRGKET
TrEMBL top hitse value%identityAlignment
A0A2N9I9Y8 Uncharacterized protein3.7e-0739.8Show/hide
Query:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFVFC---------LGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKM
        V+  + +A++IGTEA+ Q+DFL+QL+  +V             +AND  QSSSR +EQ K+IEQ++H   +K  R     C +LFL  + + +D+QKM
Subjt:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFVFC---------LGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKM
A0A3N6RRY1 Uncharacterized protein1.6e-0539.29Show/hide
Query:  IAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMN
        IA++IG+EA+ Q++FLD L+        VA+D+D+S+SR KE+ K+ E ++HT+  +           L LYS++V++D+QKM+
Subjt:  IAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMN
W9R802 Bet1-like protein1.4e-0650.75Show/hide
Query:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRP
        V+  + +A++IGTEA+ Q DFL+QL           ND DQSSSR KEQRK+IEQK+H+E ++ C P
Subjt:  VQSAKLIAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTAGGTGGTTTGCGATAGATACCCTACTTCAAGGAGGTTCCTTATGTCAAGATCCTCTTTCCTTGGAGCACTTGATGGAAACCTTTCTTAGAGAAGAGGGTTC
ATTTCTTTTGACATACGTTGAACTTTGTCTAAGGAGGTTCCTTTGTCAGACAGATCGGAGAGGAGCAAAGGGAGGAAAGGGAAATATTCTGTCCTCTACTTGCCTTTTCG
TTTTTTGGGGACAAAGGAGGGAATACTATAGGTTAGCTAGCAGTCAGAAGGCATACGTTTTTAAAGTCATAAGTTCAATCCTTGGTCACTGTCTTCCTCTTTTACCCTTT
CTTAAGCTCCAGAAATGTCTGACGGTTGCTTTAAATACATCTAGGGTCGGCAATTTCTCTGTTCAAAGTGCAAAACTGATTGCTCAAGATATCGGGACAGAAGCAAAGTC
CCAGCAAGATTTTCTAGATCAGTTGATTCGAACTTTTGTTTTCTGTCTTGGTGTAGCAAATGACATTGATCAAAGCTCAAGCAGGAGTAAAGAACAACGTAAGAAGATTG
AACAAAAAAATCATACAGAACGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATATATGTGGTCAAAGATATCCAGAAAATGAAT
GCTTTCCTCACTTTCCTCATTATGAATGGAATACCAGTTGCTGGCCTGCGAAGAGGAAAAGAAACAGAAATGATGTTTAATATTATCACTGTCACCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCTAGGTGGTTTGCGATAGATACCCTACTTCAAGGAGGTTCCTTATGTCAAGATCCTCTTTCCTTGGAGCACTTGATGGAAACCTTTCTTAGAGAAGAGGGTTC
ATTTCTTTTGACATACGTTGAACTTTGTCTAAGGAGGTTCCTTTGTCAGACAGATCGGAGAGGAGCAAAGGGAGGAAAGGGAAATATTCTGTCCTCTACTTGCCTTTTCG
TTTTTTGGGGACAAAGGAGGGAATACTATAGGTTAGCTAGCAGTCAGAAGGCATACGTTTTTAAAGTCATAAGTTCAATCCTTGGTCACTGTCTTCCTCTTTTACCCTTT
CTTAAGCTCCAGAAATGTCTGACGGTTGCTTTAAATACATCTAGGGTCGGCAATTTCTCTGTTCAAAGTGCAAAACTGATTGCTCAAGATATCGGGACAGAAGCAAAGTC
CCAGCAAGATTTTCTAGATCAGTTGATTCGAACTTTTGTTTTCTGTCTTGGTGTAGCAAATGACATTGATCAAAGCTCAAGCAGGAGTAAAGAACAACGTAAGAAGATTG
AACAAAAAAATCATACAGAACGGATCAAATCATGTCGTCCAGGTCGTCGTATTTGCATTGATCTGTTTCTTTATAGTATATATGTGGTCAAAGATATCCAGAAAATGAAT
GCTTTCCTCACTTTCCTCATTATGAATGGAATACCAGTTGCTGGCCTGCGAAGAGGAAAAGAAACAGAAATGATGTTTAATATTATCACTGTCACCCATTAG
Protein sequenceShow/hide protein sequence
MGARWFAIDTLLQGGSLCQDPLSLEHLMETFLREEGSFLLTYVELCLRRFLCQTDRRGAKGGKGNILSSTCLFVFWGQRREYYRLASSQKAYVFKVISSILGHCLPLLPF
LKLQKCLTVALNTSRVGNFSVQSAKLIAQDIGTEAKSQQDFLDQLIRTFVFCLGVANDIDQSSSRSKEQRKKIEQKNHTERIKSCRPGRRICIDLFLYSIYVVKDIQKMN
AFLTFLIMNGIPVAGLRRGKETEMMFNIITVTH