; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg016247 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg016247
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRRM domain-containing protein
Genome locationscaffold9:44547193..44550590
RNA-Seq ExpressionSpg016247
SyntenySpg016247
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608363.1 RNA-binding protein 2, partial [Cucurbita argyrosperma subsp. sororia]1.3e-10875.84Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL
        MGD AYTRYAASADRAGSVAR GLS YSEAPPLTSYPNSTS+DPW IPPDYL K+ +SSGPG YGYTD+GGIRNYPEPVIGGVTSGVSA G TSPF D+ 
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL

Query:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI
        A QR DIAVGSSPGLM +AD GH +A+SLGLRN E VPISA ESNILF+DGLPTDCTRREVG                          ++FRPF+GYKDI
Subjt:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI

Query:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        RVVHKEPRR GDKATVLCFVEFIEAR++RAAMEALQGYKFDDKK DS ALKIQFAHFPF LPSN DD R
Subjt:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

XP_022939988.1 RNA-binding protein 2-like [Cucurbita moschata]1.3e-10875.84Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL
        MGD AYTRYAASADRAGSVAR GLS YSEAPPLTSYPNSTS+DPW IPPDYL K+ +SSGPG YGYTD+GGIRNYPEPVIGGVTSGVSA G TSPF D+ 
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL

Query:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI
        A QR DIAVGSSPGLM +AD GH +A+SLGLRN E VPISA ESNILF+DGLPTDCTRREVG                          ++FRPF+GYKDI
Subjt:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI

Query:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        RVVHKEPRR GDKATVLCFVEFIEAR++RAAMEALQGYKFDDKK DS ALKIQFAHFPF LPSN DD R
Subjt:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

XP_022982403.1 RNA-binding protein 2-like [Cucurbita maxima]7.9e-11176.58Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL
        MGD AYTRYAAS DRAGSVAR GLS YSEAPPLTSYPNSTS+DPW IPPDYLQK+ +SSGPG YGYTD+GGIRNYPEPVIGGVTSGVSA G TSPF D+ 
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL

Query:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI
        A QR DIAVGSSPGLM +AD GH +A+SLGLRN E VPISAHESNILF+DGLPTDCTRREVG                          ++FRPF+GYKDI
Subjt:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI

Query:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        RVVHKEPRR GDKATVLCFVEFIEAR++RAAMEALQGYKFDDKK DS ALKIQFAHFPF LPSNHDD R
Subjt:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

XP_038896812.1 RNA-binding protein 2-like isoform X1 [Benincasa hispida]2.2e-10875.93Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL
        MGD AYTRYAASADRAGSVAR GLS YSEAPPLTSYPNSTS+D WHI PDYLQKD NS GPGAYGYTD+GGI NYPEPVIG V SG SAKGYTSPF DSL
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL

Query:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI
        ASQRQDIAVGSSPG+MG+AD  H RA+SL LR AE  P S+ ESNILF+DGLPTDCTRREVG                          ++FRPF+GYKDI
Subjt:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI

Query:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQ-GYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        RVVHKEPRRSGDKA VLCFVEFIEAR+AR AMEALQ GYKFDDKK DSP+LKIQFAHFPF LPSNHDD R
Subjt:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQ-GYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

XP_038896813.1 RNA-binding protein 2-like isoform X2 [Benincasa hispida]8.8e-11076.21Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL
        MGD AYTRYAASADRAGSVAR GLS YSEAPPLTSYPNSTS+D WHI PDYLQKD NS GPGAYGYTD+GGI NYPEPVIG V SG SAKGYTSPF DSL
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL

Query:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI
        ASQRQDIAVGSSPG+MG+AD  H RA+SL LR AE  P S+ ESNILF+DGLPTDCTRREVG                          ++FRPF+GYKDI
Subjt:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI

Query:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        RVVHKEPRRSGDKA VLCFVEFIEAR+AR AMEALQGYKFDDKK DSP+LKIQFAHFPF LPSNHDD R
Subjt:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

TrEMBL top hitse value%identityAlignment
A0A1S3BU06 RNA-binding protein 2-like isoform X15.9e-10473.61Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHI-PPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDS
        MGD AYTRYAASADRAGSVAR GLS YSEAPPL SYPNSTS+D WH  PPDY+ +D NS GPGAYGYTD+GG   YPEPVIGGVTSGVSA GY SPF DS
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHI-PPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDS

Query:  LASQRQDIAVGSSPGLMGIADPGHGRASSLG-LRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYK
        LASQRQDIAVGSSPG+MG AD GH RA+SL  +R AE  P S  ESNILF+DGLPTDCTRREVG                          ++FRPF+GYK
Subjt:  LASQRQDIAVGSSPGLMGIADPGHGRASSLG-LRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYK

Query:  DIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDD
        DIRVVHKEPRRSGDKATVLCFVEF+EA+ ++AAMEALQGYKFDDKK DSPALKIQFAHFPF LPSNHDD
Subjt:  DIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDD

A0A5D3D938 RNA-binding protein 2-like isoform X15.9e-10473.61Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHI-PPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDS
        MGD AYTRYAASADRAGSVAR GLS YSEAPPL SYPNSTS+D WH  PPDY+ +D NS GPGAYGYTD+GG   YPEPVIGGVTSGVSA GY SPF DS
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHI-PPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDS

Query:  LASQRQDIAVGSSPGLMGIADPGHGRASSLG-LRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYK
        LASQRQDIAVGSSPG+MG AD GH RA+SL  +R AE  P S  ESNILF+DGLPTDCTRREVG                          ++FRPF+GYK
Subjt:  LASQRQDIAVGSSPGLMGIADPGHGRASSLG-LRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYK

Query:  DIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDD
        DIRVVHKEPRRSGDKATVLCFVEF+EA+ ++AAMEALQGYKFDDKK DSPALKIQFAHFPF LPSNHDD
Subjt:  DIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDD

A0A6J1CBB3 uncharacterized protein LOC1110099332.2e-10674.81Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPL-TSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDS
        MGD AY+RYAASADR GSVAR   S YSEAPPL TSYPN+ S+D WH PPDYLQKD NSSG GAYGY DIG IRNYPEPVIGGVTSGV+AKGYTSPF DS
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPL-TSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDS

Query:  LASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKD
        LASQRQ+IAVGSSPGL+G+AD GH RASSLGLRNAE VPIS  ESNILF+DGLPTDCTRREVG                          ++FRPF+GYKD
Subjt:  LASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKD

Query:  IRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        IRVVHKEPRRSGDKA VLCFVEF+EA+ A AAM ALQGYKFDDKK DSPALK+ FAHFPF LPSNH+DGR
Subjt:  IRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

A0A6J1FN25 RNA-binding protein 2-like6.1e-10975.84Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL
        MGD AYTRYAASADRAGSVAR GLS YSEAPPLTSYPNSTS+DPW IPPDYL K+ +SSGPG YGYTD+GGIRNYPEPVIGGVTSGVSA G TSPF D+ 
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL

Query:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI
        A QR DIAVGSSPGLM +AD GH +A+SLGLRN E VPISA ESNILF+DGLPTDCTRREVG                          ++FRPF+GYKDI
Subjt:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI

Query:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        RVVHKEPRR GDKATVLCFVEFIEAR++RAAMEALQGYKFDDKK DS ALKIQFAHFPF LPSN DD R
Subjt:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

A0A6J1J4R2 RNA-binding protein 2-like3.8e-11176.58Show/hide
Query:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL
        MGD AYTRYAAS DRAGSVAR GLS YSEAPPLTSYPNSTS+DPW IPPDYLQK+ +SSGPG YGYTD+GGIRNYPEPVIGGVTSGVSA G TSPF D+ 
Subjt:  MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSL

Query:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI
        A QR DIAVGSSPGLM +AD GH +A+SLGLRN E VPISAHESNILF+DGLPTDCTRREVG                          ++FRPF+GYKDI
Subjt:  ASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDI

Query:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        RVVHKEPRR GDKATVLCFVEFIEAR++RAAMEALQGYKFDDKK DS ALKIQFAHFPF LPSNHDD R
Subjt:  RVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

SwissProt top hitse value%identityAlignment
A1A6K6 Nuclear speckle RNA-binding protein A5.9e-1636.13Show/hide
Query:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK
        SN L+++GLP++C+RREV                           +IFRPFVGY+++R+V K+ +       VLCFV+F     A  A+ ALQGY+ D+ 
Subjt:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK

Query:  KTDSPALKIQFAHFPFHLP
        ++DS  L++QF+  P   P
Subjt:  KTDSPALKIQFAHFPFHLP

F4HWF9 Nuclear speckle RNA-binding protein B1.4e-1733.33Show/hide
Query:  DPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCF
        D G G+  S+G    E  P+    SN L+++GLP++C+RREV                           +IFRPFVGY+++R+V ++ +      TVLCF
Subjt:  DPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCF

Query:  VEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        V+F  +  A  A+ ALQ Y+ D+ + DS  L++QF   P   P      R
Subjt:  VEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

G7ID19 RNA-binding protein 22.6e-1630.82Show/hide
Query:  LASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKD
        L+   +D+  G    +  ++ PG            E +P+    S+ L+++GLP+D T+REV                           +IFRPFVGY++
Subjt:  LASQRQDIAVGSSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKD

Query:  IRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFP
        +R+V KE +  G    +LCFV+F     A  A+ ALQGYK D+   +S  L++QF+  P
Subjt:  IRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFP

Q6JB11 Protein MATERNALLY EXPRESSED GENE 51.9e-1438.39Show/hide
Query:  PISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQG
        P+    S+ L+I+GLP +CTRREV                           +IFRPFVG++++R+V+KE R  G    VLCFV+F     A  A+EALQG
Subjt:  PISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQG

Query:  YKFDDKKTDSPA
        +  DD    +PA
Subjt:  YKFDDKKTDSPA

Q8H0P8 RNA-binding protein 12.0e-1640Show/hide
Query:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK
        S  L+I+GLP+DCTRREV                           +IFRPFVGY+++R+V KE +  GD   +LCFV+F     A  A+ ALQGYK D+ 
Subjt:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK

Query:  KTDSPALKIQFAHFP
          +S  L++QF+ +P
Subjt:  KTDSPALKIQFAHFP

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding9.9e-1933.33Show/hide
Query:  DPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCF
        D G G+  S+G    E  P+    SN L+++GLP++C+RREV                           +IFRPFVGY+++R+V ++ +      TVLCF
Subjt:  DPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCF

Query:  VEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        V+F  +  A  A+ ALQ Y+ D+ + DS  L++QF   P   P      R
Subjt:  VEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

AT1G21320.2 nucleotide binding;nucleic acid binding9.9e-1933.33Show/hide
Query:  DPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCF
        D G G+  S+G    E  P+    SN L+++GLP++C+RREV                           +IFRPFVGY+++R+V ++ +      TVLCF
Subjt:  DPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCF

Query:  VEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR
        V+F  +  A  A+ ALQ Y+ D+ + DS  L++QF   P   P      R
Subjt:  VEFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR

AT1G76940.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-1736.13Show/hide
Query:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK
        SN L+++GLP++C+RREV                           +IFRPFVGY+++R+V K+ +       VLCFV+F     A  A+ ALQGY+ D+ 
Subjt:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK

Query:  KTDSPALKIQFAHFPFHLP
        ++DS  L++QF+  P   P
Subjt:  KTDSPALKIQFAHFPFHLP

AT1G76940.2 RNA-binding (RRM/RBD/RNP motifs) family protein4.2e-1736.13Show/hide
Query:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK
        SN L+++GLP++C+RREV                           +IFRPFVGY+++R+V K+ +       VLCFV+F     A  A+ ALQGY+ D+ 
Subjt:  SNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFVEFIEARHARAAMEALQGYKFDDK

Query:  KTDSPALKIQFAHFPFHLP
        ++DS  L++QF+  P   P
Subjt:  KTDSPALKIQFAHFPFHLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACCACGCTTATACCAGATACGCCGCCTCCGCCGATAGAGCAGGAAGTGTAGCGAGGCCTGGCCTTTCACCCTACTCTGAAGCACCTCCTTTGACATCTTACCC
CAATTCGACTTCCGTTGATCCATGGCACATCCCTCCTGATTATTTGCAGAAAGATATAAATTCATCAGGACCTGGAGCTTATGGATATACTGACATAGGTGGCATTAGAA
ATTATCCAGAACCAGTTATTGGCGGTGTGACGTCTGGAGTGAGTGCAAAAGGCTACACATCTCCTTTTGTGGATTCATTAGCAAGTCAAAGACAAGATATTGCAGTGGGC
AGTAGTCCAGGGCTGATGGGTATAGCGGACCCAGGTCACGGAAGAGCCAGTTCTCTTGGTCTCAGAAATGCTGAATTTGTTCCAATTTCAGCTCACGAATCAAACATTCT
TTTCATTGATGGACTTCCTACAGATTGTACTAGAAGAGAAGTAGGCCGTATCCTTGCACTATATGTGCTTGCTTTTGTTACTATTTCTCCTGTCGTCCCAACTTTATCTA
CCTCCACTGCTTTAAATATTTTCCGCCCCTTCGTTGGTTATAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGTGGAGATAAAGCTACGGTATTATGCTTTGTA
GAGTTCATTGAAGCAAGACACGCCCGTGCTGCAATGGAAGCTCTTCAAGGTTACAAGTTCGATGACAAAAAAACAGATTCCCCAGCTTTGAAGATTCAATTTGCACATTT
TCCTTTCCACTTACCATCTAACCACGATGATGGGCGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACCACGCTTATACCAGATACGCCGCCTCCGCCGATAGAGCAGGAAGTGTAGCGAGGCCTGGCCTTTCACCCTACTCTGAAGCACCTCCTTTGACATCTTACCC
CAATTCGACTTCCGTTGATCCATGGCACATCCCTCCTGATTATTTGCAGAAAGATATAAATTCATCAGGACCTGGAGCTTATGGATATACTGACATAGGTGGCATTAGAA
ATTATCCAGAACCAGTTATTGGCGGTGTGACGTCTGGAGTGAGTGCAAAAGGCTACACATCTCCTTTTGTGGATTCATTAGCAAGTCAAAGACAAGATATTGCAGTGGGC
AGTAGTCCAGGGCTGATGGGTATAGCGGACCCAGGTCACGGAAGAGCCAGTTCTCTTGGTCTCAGAAATGCTGAATTTGTTCCAATTTCAGCTCACGAATCAAACATTCT
TTTCATTGATGGACTTCCTACAGATTGTACTAGAAGAGAAGTAGGCCGTATCCTTGCACTATATGTGCTTGCTTTTGTTACTATTTCTCCTGTCGTCCCAACTTTATCTA
CCTCCACTGCTTTAAATATTTTCCGCCCCTTCGTTGGTTATAAAGATATCAGAGTTGTTCACAAGGAGCCCAGACGAAGTGGAGATAAAGCTACGGTATTATGCTTTGTA
GAGTTCATTGAAGCAAGACACGCCCGTGCTGCAATGGAAGCTCTTCAAGGTTACAAGTTCGATGACAAAAAAACAGATTCCCCAGCTTTGAAGATTCAATTTGCACATTT
TCCTTTCCACTTACCATCTAACCACGATGATGGGCGATGA
Protein sequenceShow/hide protein sequence
MGDHAYTRYAASADRAGSVARPGLSPYSEAPPLTSYPNSTSVDPWHIPPDYLQKDINSSGPGAYGYTDIGGIRNYPEPVIGGVTSGVSAKGYTSPFVDSLASQRQDIAVG
SSPGLMGIADPGHGRASSLGLRNAEFVPISAHESNILFIDGLPTDCTRREVGRILALYVLAFVTISPVVPTLSTSTALNIFRPFVGYKDIRVVHKEPRRSGDKATVLCFV
EFIEARHARAAMEALQGYKFDDKKTDSPALKIQFAHFPFHLPSNHDDGR